Pongo abelii (Sumatran orangutan): 100443889
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Entry
100443889 CDS
T01416
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pon04121
]
100443889 (TOPORS)
03036 Chromosome and associated proteins [BR:
pon03036
]
100443889 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pon03037
]
100443889 (TOPORS)
Enzymes [BR:
pon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100443889 (TOPORS)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100443889 (TOPORS)
UBL E3 ligases
100443889 (TOPORS)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100443889 (TOPORS)
Cilium and associated proteins [BR:
pon03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100443889 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
100443889
NCBI-ProteinID:
XP_002819762
Ensembl:
ENSPPYG00000036532
UniProt:
A0A2J8XIL9
LinkDB
All DBs
Position
13:25407993..25419709
Genome browser
AA seq
1045 aa
AA seq
DB search
MGSQPPLGSPLSREEGEAPPPAPASEGRRRSRRVRLRGSCRHRPSFLGCRELAASAPARP
APASSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCL
HKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFVTPDRRFRY
RTTLTRERNASVYSPSGPVNRRTTTPPDSGVLFEGLGISTRPRDVEIPQFMRQIAVRRPT
TADERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRLVPWL
KRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISFAR
SPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDINVATVSQAPWDDET
PGPSYSSSEQVHVTMSSLLNTSDSSDEELVTGGATSQIQGVQTNEDLNNDSDDSSDNCVI
VGFVKPLAERTPELVELSSDSEDLGSYEKMETVKTQEQEQSYSSGDSDVSRCSSPHSVLG
KDEQINKGHCDSSTRIKSKKEEKRSTSLSSPRNLSSSVRGDRVYSPYNHRHRKRGRSRSS
DSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTL
SLSSESTSRSRSRSSDHGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGYESSY
RRRTLSRAHYSRQSSSPEFRGQSFSERTNARKKNNHSERKYYYYERHRSRSLSSNRSRTA
STGTDRVRNEKPGGKRKYKTRHLEGTNEVAQPSREFASKAKDSHYQKSSSKFDGNYKNES
DTFSDSRSSDRETKHKRRKRKTRSLSVEIVYEGKATDTTKHHKKKKKKHKKKHKKHHGDN
ASHSPVVITIDSDSDKDSEVKEDTECDNSGPQDPLQNEFLAPSLEPFETKDVVTIEDEFG
VLDKECDIATLTNNLNNANKTVDNIPPLAASVEQTLDVREESTFVSDLENQPSNIVSVQT
EPSRQLPSPRTSLMSVCLGRDCDMS
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagccgccgctggggtctccgctgtctcgcgaggagggtgaagcgcccccg
cctgctcccgcttcggagggtaggcggagaagtcgccgggtacgccttcgcggatcctgc
cgtcaccgacctagctttctgggctgccgggagctcgcggcgagcgccccagccaggcct
gcgccggcatcctccgagataatggcatcagctgctaaggaatttaaaatggacaacttt
tcacctaaagctggcactagcaaattgcaacagacagtaccagctgatgcatctcctgat
tctaagtgtccgatatgcttggatagatttgataatgtgtcttacttagatcgctgctta
cataagttctgttttcgctgtgtacaggagtggtcaaaaaacaaagctgaatgcccacta
tgtaaacagccctttgattctattttccattctgtgagggcagaagatgacttcaaggag
tatgtcctaaggccttcgtataatggttcttttgtcacccctgatcgacgatttcgctac
cgtacaactctgacaagggaacgaaatgcttctgtttattcacctagtggtcctgtgaac
agaagaacaacaactccaccagatagtggagtactattcgaagggttaggcatttcaaca
agacctagagatgttgaaattcctcaatttatgagacaaattgcagtaaggaggccaact
acggcagatgaaagatctttgcggaaaattcaagaacaagatattattaattttagacga
actctctatcgtgctggtgctcgagttagaaatattgaagatggtggccgctacagggat
atttcagctgaatttttccgtagaaatccagcttgccttcacagattagtcccctggtta
aaacgtgaacttacagttctttttggagctcatggatctttagtgaatattgtccagcat
attatcatgagtaatgttactcgctatgacttggagagtcaggcatttgtgtctgattta
agaccatttttacttaatcgaactgagcattttatacatgaatttatcagttttgcccga
tctccttttaacatggcagcctttgaccagcatgccaattatgattgccctgctccttca
tatgaagaaggcagccattctgattcttcagtcataacaatatctccagatgaggctgag
acccaagagctggatattaatgtagctactgttagtcaggcaccatgggatgatgaaact
ccaggaccatcttactcaagctcagagcaggtacacgttactatgtcttctcttttaaat
acttctgacagttcagatgaagaacttgtcacaggaggagccacatctcagatacaagga
gtacaaaccaatgaggacctaaataatgacagtgatgattcttcagataattgtgtcatt
gttgggtttgttaaaccactagctgagaggaccccagaacttgttgaactgtcctctgat
tctgaggacttaggttcttatgagaaaatggagacagtcaagacacaagaacaggagcaa
tcttacagttctggtgatagcgatgttagtagatgctcatctccacattctgtccttgga
aaggatgaacaaataaataaaggtcattgtgattctagtacaagaatcaaatcaaagaag
gaagagaaacgatctacatcattgtcatctcccagaaacctgagctcatctgtaagagga
gacagagtatattctccatataaccacagacacagaaagaggggaagatcaagaagttca
gattcacgttctcagagtagaagtgggcatgatcagaaaaatcatagaaagcatcatggg
aagaaaaggatgaaaagtaaacgatccagaagcagggaaagtagcagacctagagggaga
agagacaaaaagagatcaagaactagagatagcagttggtccagaagaagccaaactctg
tctctaagtagtgaaagcacaagcagatcaaggtctcgtagcagtgatcatggtaaaaga
agatcacggagcagaaatagagatcgttattatttaagaaataattatggaagcagatac
aaatgggagtatacttattacagtagaaacaaggacagggatgggtatgaatcatcttac
aggaggaggactctgtccagagctcattattccagacagtcttcaagtccagaatttaga
ggtcagtctttttctgaaagaacaaatgctaggaaaaaaaataatcacagtgagaggaag
tattactactatgaaaggcacagatcaaggagcctgtctagtaacagatcaagaactgca
tctaccgggactgaccgggtgagaaatgaaaagcctggagggaaacgaaaatacaaaaca
cggcatttggagggtactaacgaagtggctcagccatctcgtgaatttgcttctaaagca
aaggacagtcattaccaaaaatcttcatcaaaattcgatggaaactacaaaaatgagagt
gataccttttcagacagccgatcatcagacagagagacaaaacacaaaagaagaaaaagg
aagacccggagcctaagtgtagagatagtttatgaaggaaaagctactgatacaactaaa
caccataaaaagaaaaagaagaaacataagaagaagcataagaaacaccatggagataat
gcttcacattccccagttgtaattaccattgacagtgacagtgataaggattctgaagta
aaggaggatacagaatgtgacaatagtggtcctcaagaccctctacaaaatgagtttttg
gctccttccttggaaccatttgaaactaaagatgtagttacaatagaagatgaatttggt
gtgctggacaaggaatgtgatattgccacacttactaacaacttgaataatgccaacaaa
actgtagataatattccacctctggcagcttcagttgaacaaactctcgatgtaagagaa
gagagcacctttgtttccgatttggagaaccagcccagtaacattgtgtctgttcaaact
gagccatcaaggcagttgccatctccacggacatcattaatgtcagtatgtcttggtaga
gactgtgatatgtcttaa
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