Pongo abelii (Sumatran orangutan): 100444096
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Entry
100444096 CDS
T01416
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03008
Ribosome biogenesis in eukaryotes
pon05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100444096 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100444096 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100444096 (DROSHA)
03009 Ribosome biogenesis [BR:
pon03009
]
100444096 (DROSHA)
03036 Chromosome and associated proteins [BR:
pon03036
]
100444096 (DROSHA)
Enzymes [BR:
pon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
100444096 (DROSHA)
Messenger RNA biogenesis [BR:
pon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
100444096 (DROSHA)
Ribosome biogenesis [BR:
pon03009
]
Eukaryotic type
90S particles
RNase
100444096 (DROSHA)
Prokaryotic type
rRNA processing factors
100444096 (DROSHA)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
100444096 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
5_3_exonuc
YcaO
Motif
Other DBs
NCBI-GeneID:
100444096
NCBI-ProteinID:
XP_024103066
Ensembl:
ENSPPYG00000015370
UniProt:
A0A2J8WAT2
LinkDB
All DBs
Position
4:complement(31954027..32085258)
Genome browser
AA seq
1374 aa
AA seq
DB search
MMQGNTCHRMSFHPGRGCPRGRGGHGARPSAPSFRPQNLRLLHPQQPPVQYQYEPPSAPS
ATFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPM
PPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPP
SFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR
GERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERHRHRDNRRS
PSLERSYKKEYKRSGRSYGLSVVPEPAGCTPELPGEIIKNTDSWAPPLEIVNHRSPSREK
KRARWEEEKDRWSDNQSSGKDKNYTSIKEKEPEETMPDKNEEEEEELLKPVWIRCTHSEN
YYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQEKAKAARPPWEPPKTKLDEDLESS
SESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSA
KARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYI
FEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELY
DWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIA
NMLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPA
QLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTV
ELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHP
SHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPS
RINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDR
FMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDPDLREVWLN
YPLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTL
GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA
ITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWND
PKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQA
EMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDETEDIKK
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagggcaacacatgtcacagaatgtcgttccacccgggacgagggtgtccccga
ggacgaggaggacatggagccagaccctcagcaccatcctttaggccccaaaatctgagg
ctgcttcaccctcagcagcctcctgtgcaatatcaatatgaacctccaagtgccccttct
gccactttctcaaactctccagcccccaattttctccctccacgaccagactttgtaccc
ttccccccacccatgcctccgtcagcgcaaggccctcttcccccctgcccaatcaggcct
cctttccccaaccaccagatgaggcaccccttcccagttcctccttgttttcctcccatg
ccaccaccaatgccttgtcctaataaccccccagtccctggggcacctcctggacaaggc
actttccccttcatgatgccccctccctccatgcctcatcccccgccccctccagtcatg
ccgcagcaggttaattatcagtaccctccgggctattctcaccacaacttcccacctccc
agttttaatagtttccagaacaaccctagttctttcctgcccagtgctaataacagcagt
agtcctcatttcagacatctccctccatacccactcccaaaggctcccagtgagagaagg
tccccagaaaggctgaaacactatgatgaccacaggcaccgagatcacagtcatgggcga
ggtgagaggcatcggtccctggatcggcgggagcgaggccgcagtcccgacaggagaaga
caagacagccggtacagatctgattatgaccgagggagaacaccatctcgccaccgcagc
tacgagcggagcagagagcgagaacgggagagacacaggcatcgagacaaccgaagatca
ccatctctggaaaggtcctacaaaaaagagtataagagatctggaaggagttacggttta
tcggttgttcctgaacctgctggatgcacaccagaattacctggggagattattaaaaat
acagattcttgggccccacccctggagattgtgaatcatcgctccccaagtagggagaag
aagagagctcgttgggaggaagaaaaagaccgatggagtgacaaccagagctctggcaaa
gacaagaactatacctcaatcaaggaaaaagagcccgaggagaccatgcctgacaagaat
gaggaggaggaagaagaacttcttaagcctgtgtggattcgatgcactcattcagaaaac
tactactccagtgaccccatggatcaggtgggagattctacagtggttggaacaagtagg
cttcgtgacttatatgacaaatttgaggaggagttggggagcaggcaagaaaaggccaaa
gctgctcggcctccgtgggaacctccgaagacgaagcttgatgaagatttagagagttcc
agtgaatccgagtgtgagtcggatgaggacagcacctgttctagcagctcagactctgaa
gtttttgacgttattgcagaaatcaaacgcaaaaaggcccaccctgaccgacttcacgat
gaactttggtacaacgatccaggccagatgaatgatggaccactctgcaaatgcagcgca
aaggcaagacgcacgggaattaggcacagcatttatcctggagaagaggccatcaagccc
tgtcgtcctatgaccaacaatgctggccgacttttccactaccggatcacagtctccccg
cctacgaactttttaactgacaggccaactgttatagaatacgatgatcacgagtatatc
tttgaaggattttctatgtttgcacatgcccccctgaccaatattccactgtgtaaagta
attagattcaacatcgactacacgattcatttcattgaagagatgatgccggagaatttt
tgtgtgaaagggcttgaactcttttcactgttcctattcagagatattttggaattatat
gactggaatcttaaaggtcctttgtttgaagacagtcctccctgctgcccaagatttcat
ttcatgccacgttttgtaagatttcttccagatggaggaaaggaagtgctgtccatgcac
cagattctcctgtacttgttaaggtgcagcaaagccctggtgcccgaggaggagattgcc
aatatgcttcagtgggaggagctggagtggcagaaatatgcagaagaatgcaaaggcatg
attgttaccaaccctgggacgaaaccaagctctgtccgtatcgatcaactggatcgtgaa
cagttcaaccccgatgtgattacttttccgattatcgtccactttgggatacgccctgca
cagttgagttatgcaggagacccacagtaccaaaaactgtggaagagttatgtgaaactt
cgccacctcctagcaaatagtcccaaagtcaaacaaactgacaaacagaagctggcacag
agggaggaagccctccaaaaaatacggcagaagaatacaatgagacgagaagtaacagtg
gagctaagtagccaaggattctggaaaactggcatccgttctgatgtctgtcagcatgca
atgatgctacctgttctgacccatcatatccgctaccaccaatgtctaatgcatttggac
aagttgataggatatactttccaagatcgttgtctgttgcagctggccatgactcatcca
agtcatcatttaaattttggaatgaatcctgatcatgccaggaattcgttgtctaactgt
ggaattcggcagcccaaatacggagacagaaaagttcatcacatgcacatgcggaagaaa
gggattaacaccttgataaatattatgtcacgccttggccaagatgacccaactccctcg
aggattaaccacaatgaacggttggaattcctgggtgatgctgttgttgaatttctgacc
agcgtccatttgtactatttgtttcctagtctggaagaaggaggattagcaacctatcgg
actgccattgttcagaatcagcaccttgccatgctagcaaagaaacttgaactggatcga
tttatgctgtatgctcacgggcctgacctttgtagagaatcggaccttcgacatgcaatg
gccaattgttttgaagcattaataggagctgtttacttggagggaagcctggaggaagcc
aagcagttatttggacgcttgctctttaatgatccggacctgcgcgaagtctggctcaat
tatcctctccacccactccaactacaagagccaaatactgatcgacaacttattgaaact
tctccggttctacaaaaacttactgagtttgaagaagcaattggagtaatttttactcat
gttcgacttctggcaagggcattcacattgagaactgtgggatttaaccatctgacccta
ggccacaatcagagaatggaattcctaggtgactccataatgcaactggtagccacagag
tacttattcattcatttcccagatcatcatgaaggacatttaactttgttgcgaagctct
ttggtgaataatagaactcaggccaaggtagcggaggagctgggcatgcaggagtatgcc
ataaccaacgacaagaccaagaggcccgtggcgcttcgcaccaagaccttggcggacctt
ttggaatcatttattgcagcgctgtacattgataaggatttggaatatgttcatactttc
atgaatgtctgcttctttccacgattgaaagagttcattttgaatcaggattggaatgac
cccaaatcccagcttcagcagtgttgcttgacacttaggacagaaggaaaagagccagac
attcctctgtacaagactctgcagacagtgggcccatcccatgcccgaacctacactgtg
gctgtttatttcaagggagaaagaataggctgtgggaaaggaccaagtattcagcaggca
gaaatgggagcagcaatggatgcgcttgaaaaatataattttccccagatggcccatcag
aagcggttcatcgaacggaagtacagacaagagttaaaagaaatgaggtgggaaagagag
catcaagagagagagccagatgagactgaagacatcaagaaataa
DBGET
integrated database retrieval system
