Pongo abelii (Sumatran orangutan): 100444160 Help Entry 100444160         CDS       T01416                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism pon  Pongo abelii (Sumatran orangutan) Pathway pon04151   PI3K-Akt signaling pathway pon04382   Cornified envelope formation pon04510   Focal adhesion pon04512   ECM-receptor interaction pon04820   Cytoskeleton in muscle cells pon04926   Relaxin signaling pathway pon04933   AGE-RAGE signaling pathway in diabetic complications pon04974   Protein digestion and absorption pon05146   Amoebiasis pon05165   Human papillomavirus infection pon05200   Pathways in cancer pon05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:pon00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100444160 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100444160 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100444160 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100444160 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     100444160 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     100444160 (COL4A1)   09158 Development and regeneration    04382 Cornified envelope formation     100444160 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100444160 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     100444160 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     100444160 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     100444160 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     100444160 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pon04147]     100444160 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:pon00536]     100444160 (COL4A1) Exosome [BR:pon04147]  Exosomal proteins   Exosomal proteins of other cancer cells    100444160 (COL4A1) Glycosaminoglycan binding proteins [BR:pon00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100444160 (COL4A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  100444160 NCBI-ProteinID:  XP_024086740 Ensembl:  ENSPPYG00000005496 LinkDB All DBs Position 14:complement(116410338..116567744) Genome browser AA seq 1669 aa AA seqDB search MGPRLSVWLLLLPAALLLHEEHSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGI PGNPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGS PGFPGEPGYPGLIGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGP KGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGTSLPGPSGRDGLPGPPGSPG PPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGLIGEIGEKGQKGESCLICDIDGYRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEIYFDLRLK GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT GPPGPPGYGPTGPIGDKGQAGFPGGPGSPGLPGPKGEPGKVVPLPGLPGAEGLPGSPGFP GPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDMGPPGTPGRPGFDG LPGNPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGSIGVPGVPGEHGAIGPPGLQGI RGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPG PKGDKGAQGLPGITGQSGLPGLPGQQGAPGIPGFPGSKGEMGVMGTPGQPGSPGPVGAPG LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG PIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPG TPGEKGVPGIPGLQGSPGLPGDKGAKGEKGQAGPPGIGIPGLRGEKGDQGIAGFPGSPGE KGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGT PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSP GIPGSKGEQGFMGPPGPQGQPGLPGSPGHATEGPKGDRGPQGQPGLPGLPGPMGPPGLPG IDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKG LPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGLPGPK GQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVCEAPAMVMAV HSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcagcgtctggcttctgctgctgcccgccgcccttctgctccacgag gagcacagccgggccgctgcgaagggtggctgtgctggctctggctgtggcaaatgtgac tgccatggagtgaagggacaaaagggtgaaagaggcctcccggggttacaaggtgtcatt gggtttcctggaatgcaaggacctgaggggccgcagggaccaccaggacaaaagggtgat actggagaaccaggactacctggaacaaaagggacaagaggacctccgggagcatctggc taccctggaaacccaggacttcccggaattcctggccaagacggcccgccaggcccccca ggtattccaggatgcaatggcacaaagggagagagagggccactcgggcctcctggcttg cctggtttcgctggaaatcccggaccaccagggttaccgggaatgaagggtgatccaggt gagatacttggccatgtgcctgggatgctgttgaaaggtgaaagaggatttcccggaatc ccagggaatccaggcccaccaggactgccagggcttcaaggtcctgttgggcctccagga tttacgggaccaccaggtccccccggccctcccggccctccaggtgaaaagggacaaatg ggcttaagttttcaaggaccgaaaggtgacaagggtgaccaaggggtcagtgggcctccg ggagtaccaggacaagctcaagttcaagaaaaaggagacttcgccaccaagggagaaaag ggccaaaaaggtgaacctggatttcaggggatgccaggggtcggagagaaaggtgaaccc ggaaaaccaggacccagaggaaaacccggaaaagatggtgacaaaggggaaaaagggagt cccggttttcctggtgaacccgggtacccaggactcataggccgccagggcccgcaggga gaaaagggtgaagcaggtcctcccggcccacctggaattgttataggcacaggacctttg ggagaaaaaggagagaggggctaccctggaactccagggccaagaggagagccaggccca aaaggtttcccaggactaccaggccaacccggacctccaggcctcccggtacctgggcag gctggtgcccctggcttccctggtgaaagaggagaaaaaggtgaccgaggatttcctggt acatctctgccaggaccaagtggaagagatgggctcccaggtcctcctggttcccccggg ccccctgggcagcctggctacacaaatggaattgtggaatgtcagcccggacctccaggt gaccagggtcctcctggaattccagggcagccaggattgataggcgaaattggagagaaa ggtcaaaaaggagagagttgcctcatctgtgatatagacggatatcgggggcctcccggg ccacagggacccccaggagaaataggtttcccaggacagccaggggccaagggcgacaga ggtttgcctggcagagatggtgttgcgggagtgccagggcctcaaggtacaccagggctg ataggccagccaggagccaagggggagcctggtgagatttatttcgacttgcggctcaaa ggtgacaaaggagacccaggcttcccaggacagcccggcatgccagggagagcgggttct cctggaagagatggccatccgggtcttcctggccccaagggctcgccgggttctgtagga ttgaaaggagagcgtggcccccctggaggagttggattcccaggcagtcgtggtgacacc ggcccccctgggcctccaggatatggtcctactggtcccattggtgacaaaggacaagca ggctttcctggaggccctggatccccaggcctgccaggtccaaagggtgaaccaggaaaa gttgttcctttaccaggcctccctggagcagaaggactgccggggtccccaggcttccca ggtccccaaggagaccgaggctttcccggaaccccaggaaggccagggctgccaggagag aagggtgctgtgggccagccaggaattggatttccagggccccctggccccaaaggtgtt gacggcttacctggagacatggggcctccggggactccaggtcgcccgggatttgatggc ttacctgggaacccaggtgtgcagggccagaagggagagcctggagttggtctgccggga ctcaaaggtttgccaggtcttcccggcattcctggcacacccggggagaaggggagcatt ggggtaccaggcgttcctggagaacacggagcgatcggaccccctgggcttcaggggatc agaggtgaaccgggacctcctggattgccaggctccgtggggtctccaggagttccagga ataggcccccctggagctaggggtccccctggaggacagggaccaccggggttgtcaggc cctcctggaataaaaggagagaagggtttccccggattccctggactggacatgccgggc cctaaaggagataaaggggctcaaggacttcctggcataacgggacagtcagggctccct ggccttcctggacagcagggggctcctgggattcctgggtttccaggttccaagggagaa atgggcgtcatggggacccctgggcagccgggctcaccaggaccagtgggtgctccggga ttaccgggtgaaaaaggggaccatggctttccgggctcctcaggacccaggggagaccct ggctttaaaggtgataagggggatgtcggtctccctggcaagcctggctccatggataag gtggacatgggcagcatgaagggccagaaaggagaccaaggagagaaaggacaaattgga ccaattggtgagaagggatcccgaggagaccctgggaccccaggagtgcctggaaaggat gggcaggcaggacagcctgggcagccaggacctaaaggtgatccaggtataagtggaacc ccaggtgctccaggacttccgggaccaaaaggatctgttggtggaatgggcttgccagga acacctggagagaaaggtgtgcccggcatccctggcctgcaaggttcacctggcttacct ggagacaaaggtgcaaaaggagagaaagggcaggcaggcccacctggcataggcatccca gggctgcgtggtgaaaagggagatcaagggatagcgggtttcccaggaagccctggtgag aagggagaaaaaggaagcatcgggatcccaggaatgccagggtccccaggccttaaaggg tctcccgggagtgttggctatccaggaagccctgggctgcctggagaaaaaggtgacaaa ggcctcccaggattggatggcatccctggtgtcaaaggagaagcaggtcttcctgggact cctggccccacaggcccagctggccagaaaggggagccaggcagtgacggaatcccgggg tcagcaggagagaagggtgaaccaggtctaccaggaagaggattcccagggtttccaggg gccaaaggagacaaaggttcaaagggtgaggtgggtttcccaggattagctgggagccca ggaattcctggatccaaaggagagcaaggattcatgggtcctccagggccccagggacag ccggggttaccgggatccccaggccatgccacggaggggcccaaaggagaccgtggacct cagggccagcctggcctgccaggacttccgggacctatggggcctccagggcttcctggg attgatggagttaaaggtgacaaaggaaatccaggctggccaggagcacccggtgtccca gggcccaagggagaccctggattccagggcatgcctggtattggtggctctccaggaatc acaggctctaagggtgatatggggcctccaggagttccaggatttcaaggtccaaaaggt cttcctggcctccagggaattaaaggtgatcaaggcgatcagggtgtcccgggagctaaa ggtctcccgggtcctcctggacccccaggtccttacgacatcatcaaaggggagcccggg ctccctggtcctgagggccccccagggctgaaagggcttcagggacttccaggcccgaaa ggccagcaaggtgttacaggattggtgggtatacctggacctccaggtattcctgggttt gacggtgcccctggccagaaaggagagatgggacctgctgggcctactggtccaagagga tttccaggtccaccaggccctgatgggttgccaggatccatggggcccccaggcacccca tctgttgatcacggcttccttgtgaccaggcacagtcaaacaatagatgacccacagtgt ccttctgggaccaaaattctttaccatgggtactctttgctctacgtgcaaggcaatgaa cgggcccatggccaggacctgggcacggccggcagctgcctgcgcaagttcagcacaatg cccttcctgttctgcaatattaacaacgtgtgcaactttgcatcacgaaatgactattcg tactggctgtccacccccgagcccatgcccatgtcaatggcacccatcacgggggacaac ataagaccatttattagtaggtgtgctgtgtgtgaggcgcccgccatggtgatggccgtg cacagtcagaccattcagatcccaccgtgccccagcgggtggtcctcgctgtggatcggc tactcttttgtgatgcacaccagtgctggtgcagaaggctctggccaagccctggcgtcc cccggctcctgtctggaggagtttagaagtgcgccattcatcgagtgtcacggccgtggg acctgtaattactacgcaaacgcttacagcttttggctcgccaccatagagaggagcgag atgttcaagaagcccacgccgtccaccttgaaggcaggggagctgcgcacgcacgtcagc cgctgccaagtctgtatgagaagaacataa

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