Pongo abelii (Sumatran orangutan): 100444932
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Entry
100444932 CDS
T01416
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X2
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pon04131
]
100444932 (LRBA)
Membrane trafficking [BR:
pon04131
]
Endosome - Lysosome transport
Others
Others
100444932 (LRBA)
Endosome - Golgi transport
100444932 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100444932 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_Vps41
SUKH_6
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
100444932
NCBI-ProteinID:
XP_024101695
Ensembl:
ENSPPYG00000015116
LinkDB
All DBs
Position
3:complement(172115063..172878878)
Genome browser
AA seq
2853 aa
AA seq
DB search
MASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIRGIRMKFAVLTGLVEVGEV
SNRDIVETVFNLLVGGQFDLEMNFIIQEGESINCMVDLLEKCDITCQAEVWSMFTAILKK
SIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK
GQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFT
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF
AQLDYRQYLSDEVDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKFHV
SRAVLELCLAFSKYLSNLQNGMPLLKQLCDHVLLNPAIWIHTPAKVQLMLYTYLSTEFIG
TVNIYNTIRRVGTVLLIMHTLKYYYWAVNPQDRSGITPKGLDGPRPNQKEILSLRAFLLM
FIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG
LRVIYKLLASKSEGIRVQALKAMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTNLIT
MTTYNVLFEILIEQIGTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESMEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH
AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFREQQGKVDEEIGLCSSTSVQAASG
IRRDVNVSVGSQQPDTKDSSVYPHFTTNGNENSSTEKTSSLESASNIELQTTNTSYEEMK
AEQENQELPDEGTLEETLTNETRNAGDLEVSSDIIEAVTVSSNSFITTGKDSMTVSEVTA
SISSPSEEDTSEMPEFLDKSIVEEEEDDDYVELKVEGSPTEEANLPTELQDNSLSPAASE
ASEKLDMFGNDHKLIFQEGKPVTEKQTDSETQDSKDSGIQTMTASGSSAMSPETTVSQIA
VESDLGQMLEEGKKATNLTRETKLINDCHGSVSEASSSEQKIAKLDVSNVATDTERLELK
ASPNVEAPQPHRHVLEISRQHEQPGQGIAPDAVNGQRRDSRSTMFRIPEFNWSQMHQRLL
TDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVVFVHNTIHLISQVMDNMVMACGGILPLL
SAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKSMSSGGI
LRQCLRLVCAVAVRNCLECQQHSQLKTRGDKALKPMHSLIPLGKSAAKSPVDIVTGGISP
VRDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPPNERH
SQSCTETGSENGNVSLSEITPAAFSTLTTASVEESESTSSARRRDSGIGEETATGLGSHV
EVTPHTAPPGVSAGPDAISEVLSTLSLEVNKSPETKNDRGNELDTKATPSVSVSKNVNVK
DILRSLVNIPADGVTVDPALLPPACLGALGDLSVEQPVQFRSFDRSVIVAAKKSAVSPST
LNTSIPTNAVSVVSSVDSAQASDVGGESPGSRSSNAKLPSVPTVDSVSQDPVSNMSITER
LEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCS
QEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFES
LCAQYSADKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRPREF
WRLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHATDEDILAKGKQSIKSQALGNQNS
ENEILLEGDDDTLSSVDEKDLENLAGPVSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDE
EDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAVMFNFPDP
ATVKKVVNYLPRVGVGTSFGLPQTRRISLASPRQLFKASNMTQRWQHREISNFEYLMFLN
TIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPIGALNPKRAAFFAERYES
WEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWRNS
QRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVHINRLA
LESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLNSITDPVLREAVEAQ
IRSFGQTPSQLLIEPHPPRGSAMQVSPLMFTDKAQQDVIMVLKFPSNSPVTHVAANTQPG
LATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLL
DQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDTGRLIQVVFGHWDVVTCLARSESY
IGGNCYILSGSRDATLLLWYWNGKCSGIGDNPGSETAAPRAILTGHDYEVTCAAVCAELG
LVLSGSQEGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCVIFYENGLFCTFSVNG
KLQATMETDDNIRAIQLSRDGQYLLTGGDRGVVVVRQVSDLKQLFAYPGCDAGIRAMALS
YDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8562 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaagacaatcgtgtcccttccccgccaccaacaggtgatgacgggggaggt
ggagggagagaagaaacccctactgaagggggtgcattgtctctgaaaccagggctcccc
atcaggggcatcagaatgaaatttgccgtgttgaccggtttggttgaagttggagaagta
tccaatagggatattgtagaaactgtctttaacctgttggtaggaggacagtttgatctg
gaaatgaatttcattatccaagaaggtgagagtattaactgcatggtggacctactggaa
aaatgtgacattacttgccaagcagaagtctggagcatgtttacagccattctgaagaaa
agcatacggaatcttcaagtctgcactgaagtaggccttgttgaaaaagtgcttgggaaa
attgaaaaagttgacaatatgatagcagatcttttagttgacatgttgggagtgctggct
agctataatttgacagttcgcgagctaaagcttttcttcagtaaacttcaaggagataaa
ggacaatggcctccacatgctgggaagttgctgtctgtgttaaagcatatgcctcagaag
tatggtcctgatgccttttttaactttccaggaaagagtgctgcagctattgcattacct
cctatagccaaatggccataccagaatggttttacatttcatacatggcttagaatggat
cctgtaaataacatcaatgtagataaggataaaccatatttgtattgtttcagaaccagc
aaaggtcttggctattctgctcattttgttggaggctgtttgattataacatcaataaag
tcaaaaggaaaaggctttcaacattgtgtgaaatttgatttcaagccccaaaagtggtat
atggttaccatagtacacatctataaccgatggaagaatagtgaacttcgatgttatgtg
aatggtgagctggcttcctatggagagataacgtggtttgtcaacactagcgataccttt
gacaaatgtttcctgggctcatcagaaacagcagatgctaatagagtattctgtggtcag
atgactgcagtttaccttttcagtgaagctcttaatgcagctcagatatttgctatttat
cagttgggcctgggatacaagggtacatttaaattcaaagcagaaagcgaccttttcctt
gctgagcatcacaaacttttattgtacgatgggaaactctccagtgccattgcattcacg
tacaatccacgggctacagatgcccagctttgtcttgaatcatctcctaaggacaaccct
tcaatttttgttcattcaccacatgcactcatgcttcaggatgtaaaggcagttttaaca
cattccatccaaagtgcaatgcattcaattggaggagtacaagtactatttccacttttt
gcacagttggattacaggcaatatttgtctgatgaggttgatttgactatatgttcaacc
ttgctggcctttatcatggaattgttgaagaactcaattgctatgcaggaacagatgctt
gcctgtaagggcttcttggtaataggatatagccttgaaaagtcttccaaatttcatgtt
agcagagcagtacttgaactttgccttgcattttcaaaatatctgagtaatctgcagaat
gggatgcccctgctcaagcaattgtgtgatcatgttcttcttaatcctgccatatggatt
cataccccagccaaggttcaactgatgctctatacttatctgtccacggaattcattggt
acagtcaacatatataacaccattcggagagttggaacagtgcttctcatcatgcacacg
ctgaagtactactactgggcagtgaatcctcaggatcgaagtggtatcaccccaaaagga
ttagatggaccacgacctaatcaaaaagaaatactttctctacgagcattcttgttgatg
ttcattaaacaattagtgatgaaggattctggagtaaaggaagatgaattacaggccatt
cttaattacctactgactatgcatgaggatgacaatctaatggatgtcctacagctgctt
gttgcattaatgtcagaacaccctaactctatgattcctgcttttgaccaaaggaatggg
ttacgtgttatctacaaacttctggcatcgaaaagtgaaggaatcagggtacaagctctt
aaggcaatgggttattttttaaaacatctggccccaaagaggaaagcagaagtcatgctt
ggacatggattattttcattgctagctgaaaggctcatgcttcagacaaatttaatcaca
atgaccacatataatgtgctgtttgagattcttatagaacagattggtactcaggtgata
cataaacagcatccagatcctgattcttcagtaaagatacaaaaccctcagatactaaaa
gtaattgcgaccctacttcgaaattctccccagtgcccagagagcatggaggttcgcaga
gcctttctttctgacatgattaaactttttaataacagtagagaaaacaggaggagcttg
ctacaatgctctgtgtggcaagaatggatgctttctctctgctattttaatcctaagaat
tcagatgagcaaaagataacggaaatggtatatgccatattcagaatcctgctttaccat
gcagtcaaatatgagtggggtggctggcgtgtgtgggtagacactttatcaatcactcat
tcaaaggtcacttttgaaatacacaaagaaaaccttgccaatatatttagagaacagcaa
ggaaaagttgatgaagaaatagggctgtgttcttcaacttcagttcaagcagcctctggc
attagaagggatgttaatgtttcggtaggatcccagcaaccagatacgaaggattcttct
gtctatcctcatttcaccacaaatggtaatgaaaattcaagtacagagaagacaagttca
ctagaatctgcatctaatattgaactgcaaactactaatacatcttatgaagaaatgaaa
gctgagcaagaaaatcaggagttaccagatgaaggcactttagaagaaacactgacaaat
gagacaaggaatgcaggtgatttagaagtatcttccgacataatagaagctgtgactgtt
tcctctaattcttttataacaactggcaaagattcaatgactgtcagtgaagtaactgct
tctataagttctccttcagaagaggatacttcagagatgccagaattcttggataagtct
atagtagaggaagaggaagatgatgattatgtggaactgaaagtagaaggcagtcctact
gaggaagctaatctacccacagagctccaagataacagtttgtctccagctgcatctgaa
gccagtgaaaaactggacatgtttggtaatgatcacaaattaatatttcaagaaggaaaa
cctgttactgaaaagcaaactgattctgaaactcaagattctaaagattctggaattcag
actatgacagcatcagggtcttcagctatgtcaccagaaactactgtttcccaaatagct
gtagaatcagaccttggtcagatgctggaggaagggaagaaagcaactaacctcactaga
gaaaccaaattaattaatgattgtcatggtagtgtctctgaggcttcttcttctgagcaa
aagattgcgaagttggatgtttccaatgttgctacagatactgagaggctggagttgaag
gccagtcccaatgtggaagcacctcaacctcatcgacatgtgcttgagatatcaaggcaa
catgagcagccagggcaaggaatagcaccagatgcagttaatggacaaaggagggattcc
agatctactatgtttcgtattcctgagttcaactggtctcagatgcatcaacgtttgctc
actgatctattattttcaatagaaacagatatacagatgtggagaagccattcaacaaag
acagttatggacttcgtgaatagcagtgataatgtcgtctttgtacacaacacaattcat
ctcatctctcaagtgatggacaatatggtcatggcttgtgggggtatactgccattgctt
tcagctgctacatcggctacacatgaactggaaaatattgaacctactcaaggcctttca
atagaagcctctgtgacatttttgcagaggctaattagccttgtggatgtgcttatattt
gcaagttctcttggctttactgaaatcgaagctgaaaaaagtatgtcatctggaggaatt
ttgcggcagtgtctccgactagtttgtgcagtggcagtaaggaattgcttggagtgtcag
cagcattcacaactgaaaactaggggagataaagccttgaaaccaatgcatagccttatt
cctttagggaaatctgcagcgaagagcccagtggacattgtgactggtggtatatctcca
gtaagagatcttgacaggcttctacaggacatggatattaatcggcttagggcagttgtt
ttcagagacatagaggatagcaaacaagctcaatttttagccttggcagtagtatacttt
atctctgttcttatggtctccaagtacagagacattttggaacccccaaatgaaaggcat
agtcagtcatgtacggaaactggcagtgaaaatggaaatgtatcactctctgaaatcaca
ccagcagcattcagcactttaactacggcatcagtggaggaatctgaaagcacatcgtct
gctcgaaggagggactcaggcattggggaagaaacagccactggtttaggaagccacgtg
gaagtaactcctcacacagcacctcctggtgtcagtgcaggcccagatgcaatcagcgag
gtgctatctactctttctttagaagtcaataagtctccggaaaccaaaaatgatagagga
aatgagttggacactaaggctacaccgtcagtttcggtttcaaaaaatgtcaatgtgaaa
gacattctccgaagcttggttaacataccagcagatggagtcacagtggatcctgccctt
ctgccaccggcctgccttggagcccttggtgatctatctgtggaacaacctgtgcagttc
agatcttttgacagaagtgtcattgttgcagcaaaaaagtcagcagtctcaccttccaca
cttaatacaagcatacctaccaatgctgtcagtgtggtttcctcagtagattcagcccaa
gcctcagatgtgggaggagaatcaccaggcagtagatcatctaatgcaaaattgccctca
gttccaacagttgattcagtttcacaagatccggtttcaaatatgagtattacagagagg
cttgaacacgctttggaaaaggcagctcctctccttcgtgagatttttgtggattttgca
ccttttctttctcggacacttttgggtagccatggacaagaactgcttatagaaggaaca
agtctggtttgcatgaagtctagtagttcagttgtggaattggttatgctactgtgttct
caggagtggcaaaattctattcagaagaatgcaggccttgcttttattgaacttgtcaat
gaaggaaggttgcttagccagacaatgaaggatcatctagtaagagtagcaaatgaagct
gaatttatcctgagcaggcagagagcagaagatattcacagacatgcggaatttgagtca
ctgtgtgcccagtattctgcagacaaacgagaagatgagaagatgtgtgatcatttgata
agagcagcaaaatatcgtgaccacgtgacagcaactcaactaatccagaaaattatcaac
attctcacagacaagcatggagcctggggaaattctgcagtgagtcgtcctcgtgagttc
tggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaaccct
ctaggatcgacacatcctgaagcgacactaaaaacagccgtggaacatgccacagatgaa
gatatccttgctaaaggaaaacagtccatcaagagtcaggctttaggaaatcagaactca
gaaaacgagatcctcctggaaggcgatgatgatactctgtcatccgtggatgagaaagat
ttagagaatcttgccggtcctgttagcctgagcacaccagctcagcttgtggccccctct
gttgtagtaaagggcactctttctgtcacctcctccgaactctattttgaggtggatgaa
gaggatcctaacttcaaaaaaatcgaccccaagatcttggcgtatacagaagggctgcat
ggaaaatggctgttcacagagatacgatcaatcttttctcgtcgttatcttttgcaaaat
acagccctggagatctttatggcaaacagagttgctgtaatgttcaacttcccagaccca
gcaacagtaaagaaagtggttaactatctacctcgtgttggcgttggaacaagttttgga
ttgcctcaaaccaggcgtatttcattagctagtccacgtcagctttttaaggcttctaat
atgacccagcgatggcaacacagagagatttctaattttgagtacttgatgtttctcaac
acgatagcaggacggagttataatgacttaaatcagtatccagtgtttccttgggtcatc
actaattatgaatcagaagaactggatcttaccttgcccaccaacttcagagatttgtcc
aagccaataggagctctgaacccaaaaagagcagccttcttcgctgagcgttatgaatca
tgggaagacgatcaagttccaaagtttcactatggtactcattactcaactgcaagtttt
gttcttgcatggctgctaagaatagaaccctttacaacttatttcctaaatttgcaagga
ggcaaatttgatcatgccgatcgaactttttcatcaatttccagagcttggcgaaacagt
cagcgtgatacatctgatattaaggagttgatccctgaattttattatctccctgagatg
tttgtcaacttcaataattataatcttggagtgatggatgatgggacagtagtgtctgat
gtcgaacttcctccttgggccaaaacctcagaagaatttgttcacataaacagattggcc
ctggagagtgaatttgtttcctgccagcttcaccaatggattgatctcatttttggctat
aaacagcaaggaccagaagctgtccgagccctcaatgtgttctattacttgacctatgaa
ggagctgtcaatctgaattcaataactgatcctgtgttgagagaggctgttgaagctcaa
atccgaagttttggacagactccttctcaactactcatagagccccatcctcccagaggt
tctgccatgcaagtgagtccattgatgttcacagacaaagcccagcaggatgttatcatg
gtcctcaagtttccctccaactcccctgttactcacgtggcagccaacacccagcctggt
ttggcaactcctgctgtgatcacagttactgctaacaggttatttgcagtgaacaaatgg
cacaaccttcctgctcatcaaggtgctgtacaagaccagccataccagctgccagtggaa
atcgatcctctcatagccagcaatacaggaatgcacaggaggcaaatcactgacctttta
gaccaaagtattcaagtgcattcccagtgctttgtcatcacttcagacaaccgctatatt
ctcgtctgtggcttctgggataagagtttcagagtctattctacagacacaggaagattg
atccaagtggtgtttggccattgggatgtcgtcacttgccttgctcgttctgagtcatat
attgggggaaattgctacattctctcagggtcacgtgatgcaactcttttgctgtggtat
tggaatggaaaatgcagtgggattggagataacccaggcagtgagactgctgctcctcgg
gccattttgacaggccatgactatgaggtcacatgtgctgcggtgtgtgccgagctaggc
ctggtgttgagtggttcacaagaaggaccatgtctcatacattccatgaatggagacttg
ttgaggaccttggagggtcctgaaaactgcctgaaaccaaaactcattcaggcttcaaga
gagggtcattgtgtcatattctatgaaaatggcctcttctgtacattcagtgtgaatgga
aaactccaggccacgatggaaacagatgataacataagagccatccagctgagccgagat
gggcagtacctgctcacaggaggagacagaggagtggtcgtggtccggcaggtgtcggac
ctcaagcagctctttgcctatccaggatgcgacgctggaatccgggccatggcgctgtct
tacgaccagaggtgcatcatttctggcatggcttcaggaagcattgtgctattttacaac
gactttaaccggtggcatcatgaataccaaacccgctactga
DBGET
integrated database retrieval system
