Pongo abelii (Sumatran orangutan): 100445183
Help
Entry
100445183 CDS
T01416
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X2
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100445183 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pon01007
]
100445183 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pon03016
]
100445183 (VARS2)
Enzymes [BR:
pon01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100445183 (VARS2)
Amino acid related enzymes [BR:
pon01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100445183 (VARS2)
Transfer RNA biogenesis [BR:
pon03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100445183 (VARS2)
Prokaryotic type
100445183 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1b
FmiP_Thoc5
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
100445183
NCBI-ProteinID:
XP_002816692
Ensembl:
ENSPPYG00000016424
UniProt:
A0A663D5W5
LinkDB
All DBs
Position
5:30967280..30979587
Genome browser
AA seq
1063 aa
AA seq
DB search
MPHLPLASFRPPFWGLRHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEA
EIAGESKSPAESIKAWRPKEVVLYEIPTKPGEKKDVSGPLPPAYSPRYVEAAWYPWWVRE
GFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWV
PGSDHAGIATQAVVEKQLWKERGVRRHELSREAFLREVWQWKEAKGGEICEQLRALGASL
DWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRNRQLVNWSCALRSAISDIEVENRPLPGH
TQLRLPGCPTPVSFGLLFSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTHL
HGRQLRHPLMGQPLPLITDYAVQPHVGTGAVKVTPAHSPADAEMGARHDLSPLNVIAEDG
TMTSLCGDWLQGLHRFVAREKIMSVLSERGLFRGLQNHPMVLPICSRSGDVIEYLLKSQW
FVRCQEMGARAAKAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHQIPAYLVVE
DHAQGEEDCWVVGRSEAEAREVAAELTGRPGAELTLERDPDVLDTWFSSALFPFSALGWP
QETTDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHPMVRDRQGRKMS
KSLGNVLDPRDIISGVEMQVLQEKLRSGNLDPAELAIVAAAQKKDFPHGIPECGTDALRF
TLCSHGVQVGDLRLSVSEVQSCRHFCNKIWNALRFILNALGEKFVPQPAEELSPSSPMDA
WILSRLALAARECERGFLTRELSLVTHALHHFWLHNLCDVYLEAVKPVLWHSPRPLGPPQ
VLFSCADFGLRLLAPLMPFLAEELWQRLPPRPGCPPAPSISVAPYPRACSLEHWRQPELE
RRFSRVQEVVQVLRALRATYQLTKARPRVLLQSSEPGDQGLFEAFLEPLGTLGYCGAVGL
LPPGTAAPSGWAQAPLSDTAQVYMELQGLVDPQIQLPLLAARRYKLQKQLDGLTARTPSE
GEAGTQRQQRLSSLQLELSKLDNAASHLRQLMDEPPASGSPEL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttgcctctcgcctcttttcgaccaccattttgggggctgaggcactcacgg
ggcctccccaggtttcattccgtttctacacagtcggagccccatggatctcccatctcc
cggaggaaccgtgaagccaaacagaagcgcctgcgagagaagcaggcgactctggaggct
gagatagcaggggagagcaagtcacctgcagaatccattaaggcctggaggcctaaggag
gtagtattgtatgaaatccctacgaaacccggtgaaaagaaagatgtctctgggcccctg
cctcctgcatacagtccccgatatgttgaggctgcctggtacccgtggtgggtacgagag
ggctttttcaaaccagagtatcaggcccggctaccccaagctacaggggagaccttttcc
atgtgtatcccacctcccaatgtcactggctccctgcacattggccacgcactcacggtg
gccatacaggatgccctcgtgcgctggcaccggatgcgtggggatcaagtgctgtgggtc
cctggttcagatcacgcaggaattgctacacaagctgtggtggagaaacaactgtggaag
gaacggggagtgaggagacatgagctgagccgggaggccttccttagggaggtgtggcag
tggaaggaggcgaaaggtggagagatctgtgagcagctgcgagctctgggtgcctccctg
gactgggatcgagagtgttttaccatggatgttggctcctcagtggctgtgactgaagct
tttgtgcggctctacaaggcggggttgctgtaccggaaccgtcagcttgtcaactggtca
tgtgctttaagatcagccatctcggacattgaggtggagaaccggcccctgcctggccac
acacagcttcgactgcctggctgccccacccccgtgtcttttggcctcctattttctgtt
gcctttcctgtggatggagagcctgatgcagaggttgtggtaggaaccacgaggccagag
acgctgcctggagatgtggctgtggccgttcatccagacgactcgcgatacacacatcta
catgggcgacagcttcgtcaccccttgatggggcagcctcttcccctcatcacagactat
gctgttcagccacatgtgggcacaggggcagtgaaggtgactccggctcacagtcctgcc
gatgctgagatgggggcccgacatgacttgagccccctgaatgtcattgcggaggatggg
accatgacctccctctgtggggactggctgcagggacttcaccggtttgtggcccgggaa
aagataatgtctgtgctgagtgaacggggcctgttccggggcctccagaaccaccccatg
gtactgcccatctgcagccgttctggggacgtgatagaatacctgctgaagagccagtgg
tttgtccgctgccaggaaatgggggcccgagctgccaaggctgtggagtcgggggccctg
gagctcagtccctccttccaccagaagaactggcagcactggttttcccatattggggac
tggtgtgtctcccggcagctgtggtggggccatcagattccagcctacctggttgtagag
gaccacgcgcagggagaagaggactgttgggtggttgggcggtcagaggctgaggccaga
gaggtagcagcagaactgacagggaggccaggggcagagctgaccctggagagggatcct
gatgtcctagacacatggttttcttctgctctgttccccttttctgcactgggctggccc
caagagaccacagaccttgctcgtttctaccccctgtcacttttggaaacgggcagcgac
cttctgctgttctgggtgggccgcatggtcatgttggggacccagctcacagggcagctg
cccttcagcaaggtgcttcttcatcccatggttcgggacaggcagggccggaagatgagc
aagtccctggggaatgtgctggacccaagagacatcatcagtggggtggagatgcaggta
ctgcaggaaaagctgagaagtggaaatttggaccccgcagagctggccattgtggctgca
gcacagaaaaaggactttcctcatgggatccctgagtgtgggacagatgccctgagattc
acactctgctcccatggagttcaggtgggcgacttgcgcctgtccgtctctgaggtccag
agctgccgacatttctgcaacaagatctggaatgctctgcgctttatcctcaatgcttta
ggggagaaatttgtgccacagcctgctgaggagctgtctccctcctccccgatggatgcc
tggatcctgagccgccttgccctggctgcccgggagtgtgagcggggcttcctcacccga
gaactctcgctcgtcactcatgccctgcaccacttctggcttcacaacctctgtgacgtc
tacctggaggctgtgaagcccgtgctgtggcactcgccccgccccctggggccccctcag
gtcctgttctcctgcgctgacttcggcctccgcctcctggccccactgatgcccttcctg
gctgaagagctctggcagaggctgccccccagacctggttgcccccctgcccccagcatc
tcggttgccccctaccccagagcctgcagcttggagcactggcgccagccagagctggag
cggcgcttctcccgggtccaagaggtcgtgcaggtgctaagggctctccgagccacgtac
cagctcaccaaagcccggccccgagtgctgctgcagagctcagagcctggggaccagggc
ctcttcgaggccttcttggagcccctgggcaccctgggctactgtggggctgtgggcctg
ttacccccaggcacagcagctccctctggctgggcccaggctccactcagtgacacggct
caggtctacatggagctgcagggcctagtggacccgcagatccagctacctctgttagcc
gcccgaaggtataagttgcagaagcagcttgatggcctcacagccaggaccccatcagaa
ggggaggcagggactcagaggcaacaaaggctttcttccctccagctggaattgtcaaaa
ctggacaacgcagcctctcacctccggcagctgatggatgagcctccagcctcagggagc
ccggagctctaa
DBGET
integrated database retrieval system
