Pongo abelii (Sumatran orangutan): 100445650
Help
Entry
100445650 CDS
T01416
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03082
ATP-dependent chromatin remodeling
pon04714
Thermogenesis
pon05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100445650 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100445650 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100445650 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100445650 (SMARCD2)
03036 Chromosome and associated proteins [BR:
pon03036
]
100445650 (SMARCD2)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100445650 (SMARCD2)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100445650 (SMARCD2)
PBAF complex
100445650 (SMARCD2)
GBAF(ncBAF) complex
100445650 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
100445650
NCBI-ProteinID:
XP_024090131
Ensembl:
ENSPPYG00000008534
UniProt:
A0A2J8UZM7
LinkDB
All DBs
Position
19:complement(79291300..79302191)
Genome browser
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFR
PMGPAGPAAQYQRPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGSPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgaggcgcgggcgggttcccgctgcccccgctgagccctggcggcggcgcc
gtggccgcggccctgggagcgccacctccccccgcgggacccggcatgctgcccggaccg
gcgctccggggaccgggtccggcaggaggcgtggggggccccggggccgccgccttccgc
cccatgggccccgcgggccccgcggcgcagtaccagcgacctggcatgtcaccagggaac
cggatgcccatggctggcttgcaggtgggaccccctgctggctccccatttggtgcagca
gctccgcttcgacctggcatgccacccaccatgatggatccattccgaaaacgcctgctt
gtgccccaggcgcagcctcccatgcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaggttctacctcagcgaatccgggagcttgttccagagtctcaggcgtacatg
gatctcttagcttttgagcggaagctggaccagaccattgctcgcaagcggatggagatc
caggaggccatcaaaaagcctctgacacaaaagcgaaagcttcggatctacatttccaat
acgttcagtcccagcaaggcggaaggcgatagtgcaggaactgcagggacccctggggga
accccggcaggggacaaggtggcttcctgggaactccgagtggaaggaaaactgctggat
gatcctagcaaacagaagaggaagttttcttcattctttaagagcctcgtcattgagctg
gacaaggagctgtacgggcctgacaatcacctggtggagtggcaccggatgcccaccacc
caggagacagatggcttccaggtaaaacggcctggagacctcaatgtcaagtgcaccctc
ctgctcatgctggatcatcagcctccccagtataaattggacccccgattggcaaggctg
ctgggagtgcacacgcagacgagggccgccatcatgcaggccctgtggctttacatcaag
cacaaccagctgcaggatgggcacgagcgggagtacatcaactgcaaccgttacttccgc
cagatcttcagttgtggccgactccgtttctccgagattcccatgaagctggcggggttg
ctgcagcatccggaccccattgtcatcaaccatgtcattagtgtggaccctaacgaccag
aagaagacagcctgttacgacatcgatgtggaggtggacgacccactgaaggcccaaatg
agcaattttctggcctctaccaccaatcagcaggagatcgcctcccttgatgtcaagatc
catgagaccattgagtccatcaaccaactgaagacccagagagatttcatgctcagtttt
agcactgacccccaggacttcatccaggaatggctccgttcccagcgccgagacctcaag
atcatcactgatgtgattggaagtcctgaggaggagagacgagctgctttctaccaccag
ccctgggcccaggaagcagtaggcaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaattcgcctgacctaa
DBGET
integrated database retrieval system
