Pongo abelii (Sumatran orangutan): 100446921
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Entry
100446921 CDS
T01416
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X21
KO
K20225
capicua transcriptional repressor
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100446921 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100446921 (CIC)
Transcription factors [BR:
pon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100446921 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100446921
NCBI-ProteinID:
XP_024097452
Ensembl:
ENSPPYG00000010041
LinkDB
All DBs
Position
20:48189850..48217143
Genome browser
AA seq
1608 aa
AA seq
DB search
MYSAHRPLMPASSAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHPVASNQSKEPAESAAVAHERPPGGTGSADPGRPPGATCPESPGPGPPHPLGVVEPG
KGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSM
SETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSSSCGAERLHTVGGPGSARPRAFSHSGV
HSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFAAPGEGGALAATGRPPLLP
TRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKERVTDSESGDSS
GEDPEGNKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPPLAFGKGYGSAPSSSASSPA
SSSASAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGAGGPATPSKATRFLPTDPATFRR
KRPESVGGLEPPGPSVIAAPPSGGGNILQTLVLPPNKEEQEGGGARVPSAPAPSLAYGAP
AAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPNDTAGARTEMGAGSRVPGG
SPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPAPPAVQF
IAQGAPGGGTTAGSGTGAGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQVAP
APAPAPGTKAGAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPKA
QSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQPP
SKIIQLTPVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGGHALPLGTS
PASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQVGVSPVPSPQL
PPACAAPGGPVITAFYSGSPAPTSSASLAQPSQAPPSLVYTVATSTTPPAATILPKGPPA
PATATPAPTSPFPSATAGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRP
GPAPRQPLEPGPVREPTAPESELEGQPTPPAPPPLPETWTPTARSSPPLPPPAEERTSAK
GPETMASKFPSSSSDWRVPGQGLENRGEPPTPPSPAPAPAVAPGGSSESSSGRAAGDTPE
RKEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTLQSLA
TSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFD
RTGTEAEDVLGELEYDKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADI
FPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPVPPPTGTAAAPAPTPSPAGGPDPT
SPSSDSGTAQAAPPLPPPPESGPGQPGWEGAPQPSPPPAGPSTAATGR
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgtattcggcccacaggcccctgatgcccgcgtccagcgcggcctcccgtggcctcggc
atgttcgtgtggactaatgtggaacctcgctctgtggctgtgttcccctggcactcctta
gtccccttcctggcacccagccagcctgacccctccgtgcagccgagcgaggcgcagcaa
cctgccagccacccagtggcctccaaccagagcaaagaacctgctgagtcggcagctgtt
gctcatgaacggccaccaggtgggacagggagtgctgaccctgggcggccccctggagcc
acatgccctgagagcccaggacccggacccccacaccctttgggggtggtggaacctggt
aagggtccgcctcccaccacggaggaggaggcccccggccccccaggagagccccggctg
gacagtgagacagagagtgaccatgatgatgccttcctctccatcatgtctcctgagatc
cagttgcctctaccgcccggaaaacgtcggacccagtccctcagtgccctacccaaggaa
cgggactcatcttctgagaaggatggacgcagccccaacaagcgggagaaggaccacatc
cggcggcccatgaatgccttcatgatcttcagcaagcggcaccgggccctggtccaccag
cgtcatcccaaccaggacaaccggaccgtcagcaagattctgggcgagtggtggtacgcc
ctggggcccaaggagaagcagaagtaccacgacctggccttccaggtgaaggaggcccac
ttcaaggcccacccagattggaagtggtgcaacaaggaccgaaagaagtccagctcagag
gccaagcccacgagcctggggctggcaggagggcacaaggagacgcgggagcggagcatg
tcggagacgggcactgctgctgcccctggggtgtcctctgagctcctgtccgttgcagcc
cagacactcctgagctcagacaccaaggctccggggagcagctcctgtggggcagaacgg
ctacacacagttgggggacctggctcagcccggccccgagctttctcccacagtggggta
cacagcctggacggcggagaagtagacagtcaggcgctacaggaactgactcagatggtg
tctggccctgcatcgtactctggcccaaaaccttctacccagtatggagctccaggaccg
tttgcagcccccggtgagggaggtgccttggcggccactgggcggcccccgctgctgccc
acccgagcttctcgttctcagcgtgcggccagtgaggacatgacgagtgatgaggagcgc
atggtcatctgtgaggaggaaggggatgatgatgtcattgctgacgatggcttcggcacc
actgacattgatctcaagtgcaaggagcgggtgaccgacagcgagagtggggacagctct
ggggaggacccagagggcaacaagggctttggtcggaaggtgttttcacctgtgatccgt
tcctcctttacccactgccgccccccactggaccctgagcccccagggcccccggatcct
cctctagcctttggcaaaggctatggttctgccccatcctcctctgcatcctcgcctgct
tcctcctcagcctcggcagccacctccttctcactgggctcaggaaccttcaaggcccag
gagtctggtcagggcagcacagcgggccccctacggcccccaccccctggggctgggggt
ccagcgacaccttccaaggcaacccggttcctcccaacggatcctgccaccttccggcgc
aagagacctgaaagtgtgggtggcctggagccaccaggcccctcagtcatcgcggcccct
cccagcggaggaggaaacatcctgcagacactggtgctgcccccaaacaaggaggagcaa
gagggcggcggagccagagtgccctccgcccccgccccatcactggcctacggggcccca
gcggctcccctgtcccgtcctgctgccaccatggtcaccaacgtggtgcggcctgtcagc
agcactcctgtccccatcgcctctaagcccttccccacctctggccgggctgaggcgtct
ccaaatgacacagcaggtgccaggactgaaatgggcgctgggtctcgggtgcctggaggc
tccccgctgggtgtcagcttagtgtattcggacaagaagtcggcagcagccacctcacca
gccccacacttggtggctggacccctgctgggcactgtggggaaggcgcctgccactgtc
actaatctactggtgggcaccccggggtatggggcccctgcgccccctgctgtccagttc
attgcccagggggcccctggtggtgggaccactgcgggctcaggaacaggtgctgggagt
ggccccaatgggccagtacccctgggcatcctgcaaccaggtgccctgggcaaggctggg
ggaatcacccaggtacagtacatcctgcccacgctgccccagcagcttcaggtggcacct
gccccagcaccagcccctgggaccaaggcaggggctcccagcggccctgcacccaccacc
agcatccgtttcaccctcccaccgggcacttctaccaacggcaaagtcctggctgccact
gcacccactcctggcatccccatcctgcagtctgtaccctccgccccaccccccaaagcc
cagtcagtttctcccgtgcaggccccgcccccgggtggctcagcccagctgctgcctggg
aaggtcctagtgcctctggctgcccctagcatgtcagtgcggggtggaggggccggccag
ccgctgccactggtgagcccgcccttctcagtacctgtgcagaatggtgcccagcccccc
agcaagatcatccagctgaccccggtgcctgtgagcacacccagcggcctggtgccgccc
ctgagcccagccacactccctggacccacctcgcagcctcagaaggtcctgctgccctct
tccaccagaatcacctatgtgcagtcagcgggcgggcacgcgctgcccctgggtaccagc
cctgcgtccagccaggctggaacagtcacctcgtacgggcccacgagctctgtagctcta
ggcttcacctcgctggggcccagcggccccgccttcgtgcagcccctgctctcagcaggc
caagccccactgctggctcccggtcaggtgggcgtgtcgcctgtgcccagtccccagctg
ccgcctgcctgtgcagcccccggaggtcctgtcataacagcattttactctggcagccct
gcacccacctcctcagcatccctggcccagccatctcaggcccccccaagcctggtctac
actgtggccaccagcacaaccccacctgcagccaccattctgcccaagggcccgccagcc
cctgccactgccaccccagccccgactagccctttccccagtgccacagcaggttccatg
acctacagcttagtggcccccaaggcccagcggcccagcccgaaggccccccagaaagtg
aaggcagccatcgccagcattcccgtggggtcctttgaggcaggtgcctctgggcggcct
ggccctgcaccccggcagcctctggagcctggcccagtccgagagccaactgccccagag
tctgagcttgaagggcagcccacaccaccagcccctccacccctgccagagacctggact
cccacagcccggagcagccccccactgcccccacctgctgaggagcggaccagtgccaag
ggtcctgagaccatggccagcaaattccccagctcatcttcagactggcgcgtccctggg
cagggcctggagaatcgtggggagcctcccactcctcccagcccggccccagctccagcc
gtagcccctggtggcagcagtgagagcagcagtgggcgggcagccggggacacccccgag
cgcaaggaggcggctggtactggcaagaaggtgaaggtgcggcccccgcccctgaagaag
acctttgactctgtggacaacagggtcctgtcagaagtggacttcgaagagcgctttgct
gagctgcctgagtttcggcctgaggaggtgctgccctcccccaccctgcagtctctggcc
acctcaccccgggccatcctgggctcttaccgcaagaagaggaagaactccacggacctg
gattcagcacccgaggaccccacctcgcccaagcgcaagatgagaagacgctccagctgc
agctcggagcccaacacccccaagagtgccaagtgcgagggggacatcttcacctttgac
cgtacaggtacagaagccgaggacgtgctcggggagctagagtatgacaaggtgccatac
tcctccctgcggcgcaccctggaccagcgccgggccctggtcatgcagctcttccaggac
catggcttctttccgtcagcccaggccacagccgccttccaggcccgctatgcagacatc
ttcccctccaaggtttgtctgcagttgaagatccgtgaggtgcgccagaagatcatgcag
gctgccactcccacggagcagccccctggagctgaggctcctctccctgtaccgcctccc
actggcaccgctgctgcccctgcccccactcccagccccgcggggggccctgaccccacc
tcacccagctcggactctggcactgcccaggctgccccgccactgcctccacccccagag
tcggggcctggacagcctggctgggagggggctccccagccctcccccccacccgcaggt
ccctccacagctgccacaggcaggtga
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