Pongo abelii (Sumatran orangutan): 100447109
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Entry
100447109 CDS
T01416
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1 isoform X3
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04068
FoxO signaling pathway
pon05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100447109 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
100447109 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pon04121
]
100447109 (RAG1)
Enzymes [BR:
pon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100447109 (RAG1)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100447109 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100447109
NCBI-ProteinID:
XP_009244739
Ensembl:
ENSPPYG00000034216
UniProt:
A0A2J8WFS4
LinkDB
All DBs
Position
9:complement(30643375..30707526)
Genome browser
AA seq
1043 aa
AA seq
DB search
MAASFPPTLGLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKTPEEAQKEKKDSFEGKPSLE
QSPAVLDKADGQKPVPTQPLLKAHPKFSKKFHDNGKARGKAIHQANLRHLCRICGNSFRT
DEHNRRYPVHGPVDGKTLGLLRKKEKRATSWPDLIAKVFRIDVKADVDSIHPTEFCHNCW
SIMHRKFSSAPCEVYFPRNVTMEWHPHTPSCDICNTARRGLKRKSLQPNLQLSKKLKTVL
DQARQASQRKRRAQARISSKDVMKKIANCSKIHLSTKLLAVDFPEHFVKSISCQICEHIL
ADPVETNCKHVFCRVCILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLNVLNSLMVKCPA
KECNEEVSLEKYNHHISSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKSVCMTLFLLALRARNEHRQADELEAIMQGKGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKILLPGYHHFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGIRSQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPVVPEKAVRFSFTIMKITIAHSSQNLKVFEEAKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSELKLELGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYHESVEELRDRVK
GVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVDAVCELIPSEGRHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNSLKTSGFTMN
SQASLGDPLGIEDSLESQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctctttcccacccaccttgggactcagttctgccccagatgaaattcagcac
ccacatattaaattttcagaatggaaatttaagctgttccgggtgagatcctttgaaaag
acacctgaagaagctcaaaaggaaaagaaggattcctttgaggggaaaccctctctggag
caatctccagcagtcctggacaaggctgatggtcagaagccagtcccaactcagccattg
ttaaaagcccaccctaagttttcaaagaaatttcatgacaacgggaaagcaagaggcaaa
gcgatccatcaagccaaccttcgacatctctgccgcatctgtgggaattcttttagaact
gatgagcacaacaggagatatccagtccatggtcctgtggatggtaaaaccctaggcctt
ttacgaaagaaggaaaagagagctacttcttggccggacctcattgccaaggttttccgg
atcgatgtgaaggcagatgttgactcgatccaccccactgagttctgccataactgctgg
agcatcatgcacaggaagtttagcagtgccccatgtgaggtttacttcccaaggaacgtg
accatggagtggcacccccacacaccatcctgtgacatctgcaacactgcccgtcgggga
ctcaagaggaagagtcttcagccaaacttgcagctcagcaaaaaactcaaaactgtgctt
gaccaagcgagacaagccagtcagcgcaagagaagagctcaggcaaggatcagcagcaag
gatgtcatgaagaagatcgccaactgcagtaagatacatcttagtaccaagctccttgca
gtggacttcccggagcactttgtgaaatccatctcctgccagatctgtgaacacattctg
gctgaccctgtggagaccaactgtaagcatgtcttttgccgggtctgcattctcagatgc
ctcaaagtcatgggcagctattgtccctcttgccgatatccatgcttccctactgacctg
gagagtccagtgaagtcctttctgaacgtcttgaattccctgatggtgaaatgtccagca
aaagagtgcaatgaggaggtcagtttggaaaaatataatcaccacatctcaagtcacaag
gaatcaaaagagacttttgtgcacattaataaagggggccggccccgccaacatcttctg
tcgctgactcggagagctcagaagcaccggctgagggagctcaagctgcaagtcaaagcc
tttgctgacaaagaagaaggtggagatgtgaagtccgtgtgcatgaccttgttcctgctg
gctctgagggcgaggaatgagcacaggcaagctgatgagctggaggccatcatgcaggga
aagggctctggcctgcagccagctgtttgcttggccatccgtgtcaacaccttcctcagc
tgcagtcagtaccacaagatgtacaggactgtgaaagccatcacagggagacagattttt
cagcctttgcatgcccttcggaatgctgagaagatacttctgccgggctaccaccacttt
gagtggcagccacctctgaagaatgtgtcttccagcactgatgttggcattattgatggg
ctgtctggactgtcatcctctgtggatgattacccagtggacaccattgcaaagaggttc
cgctatgattcagctttggtgtctgctttgatggacatggaagaagacatcttggaaggc
ataagatcccaagaccttgatgattacctgaatggccccttcactgtggtggtgaaggag
tcttgtgatggaatgggagatgtgagtgagaagcatgggagtgggccagtagttccagaa
aaggcagtccgtttttcattcacaatcatgaaaattactattgcccacagctctcagaat
ttgaaggtatttgaagaagccaaacctaactctgaactgtgttgcaagccattgtgcctt
atgctggcagatgagtctgaccatgagaccctgactgccatcctgagccctctcattgct
gagagggaggccatgaagagcagtgaattaaagcttgagctgggaggcattctccggact
ttcaaattcatcttcaggggcactggctatgatgaaaaacttgtgcgggaagtggaaggc
ctcgaggcttctggctcagtctacatttgtactctttgtgatgccacccgtctggaagcc
tctcaaaatcttgtcttccactctataaccagaagccatgctgagaacctggaacgttat
gaggtctggcgttccaacccttaccatgagtctgtggaagaactgcgggatcgggtgaaa
ggggtctcagctaaacctttcattgagacagtcccttccatagacgcactccactgtgac
attggcaatgcagctgagttttacaagatcttccagctagagataggggaagtgtataag
aatcccaatgcttccaaagaggaaaggaaaagatggcaggccacactggacaaacatctc
cggaagaagatgaacctcaaaccaatcatgaggatgaatggcaactttgccaggaagctc
atgaccaaagagactgtggatgcagtttgtgagttaattccttccgaggggaggcatgag
gctctgagggagctgatggatctttacctgaagatgaaaccagtatggcggtcatcatgc
cctgctaaagagtgcccagaatccctctgccagtacagtttcaattcacagcgttttgct
gaactcctttctaccaagttcaagtataggtatgagggaaaaatcaccaattattttcac
aaaaccctggcacatgttcctgaaattattgagagggatggctccattggggcatgggca
agtgagggaaatgagtctggtaacaaactgtttaggcgcttccggaaaatgaatgccagg
cagtccaaatgctacgagatggaagatgtcctgaaacaccactggttgtacacctccaaa
tacctccagaagtttatgaatgctcataattcattaaaaacctctgggtttaccatgaac
tctcaggcaagcttaggggacccattaggcatagaggactctctagaaagccaagattca
atggaattttaa
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