Pongo abelii (Sumatran orangutan): 100447918
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Entry
100447918 CDS
T01416
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pon04515
]
100447918 (PCDHB1)
Cell adhesion molecules [BR:
pon04515
]
Cadherins
Protocadherins
100447918 (PCDHB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
PLAC8
MP_p6
Ly49
Motif
Other DBs
NCBI-GeneID:
100447918
NCBI-ProteinID:
XP_002816033
Ensembl:
ENSPPYG00000015874
LinkDB
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Position
4:149413105..149416521
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AA seq
818 aa
AA seq
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MAGARRKSLQNRQVGFLLIFLCVSVGGATTIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLRFEIVLVEPLQSFRAE
VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHL
HTRFRSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVP
QFSRLVYRAQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNSEAILKTFQIDPQNGE
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDS
PPQTVVALFTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNI
TLVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLD
LGENAQITYSLLPPKNGDLSVFAYISINSDNGKLYALRTMDYEAIQDFQFVVKATDGGFL
SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN
SWLSYNLLKATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLN
ILLVDGFSEPYLQFQDPTKNSRKVNPSTKYLVISLAILSFLFLLSVIVIFIIHVYQKIKY
REKFTIQEHFYDDCNFSNNLVQGQGNGSLSQPCPYEMCSATGTGNSEFRFLKRFMPNFPF
PHATGEIKMEAGSSLPPNSDRNKSRRSEGHDQVSDDYM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgcgcgcagaaaatctttgcaaaacaggcaagtgggatttcttctcattttt
ctgtgcgtatctgtggggggtgcgacaactatccgctattcagtggcagaggaaatggag
agcggctcgtttgtggccaacgtagctaaggacctaggactggaggtagggaagctggct
gcgcgcggggcgcggctggtttccgagggcaacaaaatgcatttccggctccaccgcaag
acaggagatttgtttgtgaaggagaaactggatcgggagtcactttgtggcaaagccgac
ccgtgtgttctgcgctttgaaatagtcctggtggagccgctgcagtccttccgggccgag
gtcagggtatttgatatcaatgacaatgccccagttttcctaaacaaggagccgctttta
aagattccggagagcacccccttgggttcacgttttcctctgcagagcgcccaggatctg
gacgtgggccttaacggtctccagaactacaccctgagtgctaatgggtatttccacctg
cacacccgcttccgcagccacgggcctaaatatgctgagctggtgctgaacaaacccctg
gaccgagaggagcagcctgaagtcaacttgacaattacggcggtggacggcgggtccccg
cctaagtctggcacagctcacatccacgtggtggttctggatgtcaacgaccacgtgccc
cagttctcgcgactggtgtacagagcccaggtatcagagaacagccccaatggctctttg
gtggccacggtgactgccgtggacctagacgagggcaccaacaaagcgataacttactct
ttagctcaaaactcagaagcaattctcaagacgtttcagattgaccctcaaaatggagag
gttcgactaagaggacccctcgattttgaagccattgaaacatacgacattgacattcaa
gctacagatggtggaggcctctctgcccacagcaaagtcctggtagaagtggtggatgtg
aatgacaatcctccggaagtgatggtctcctctgtgtccagcccactccctgaagactca
ccaccacagacagtagtagcccttttcactatcagagaccgggacattcgagtgggagga
aaagtcacctgcttcctcagagaagaccttccctttgtaatcaagcctacattcgggaat
tcttactcgctggtcaccgacagaagcttggatcgggaggaggtctcaggctataatatc
acccttgttgccatggatactggaccacctagcttgtccgcggagactatgatagaggtg
ctaatatccgacgttaatgacaatcctccaatatttcgggaagattcctatatcttgact
gttcgagaaaacaatagtcctgcggtttttattggcaaagtccatgctgaggatcttgat
ttgggtgagaatgcccaaataacatattctctgttgcctccaaaaaacggagatctatca
gtctttgcttacatatccataaattcagacaatgggaagctctacgcactgagaaccatg
gattatgaggccattcaagatttccaatttgtggtaaaggcaactgatgggggcttcctg
tcactgagtagccaagttactgttagagtggttgtcctagatgacaatgacaatcgtcca
atgatcttatacccactgcagaatggcaccttgccctgcaatgacctggtgcccaggtct
gcagaggcaggctacctagtgaccaaagtggtggctgtggatggtgactcaggtcagaat
tcttggctttcatataatctacttaaggccactgaccttgggttattttctgttcaaaga
caaaatggagaaatccatacattaaggcagatatctgagagagaccccatgatgcagaaa
ttgatcattcttgttcaggatcacggccaaccagctctttccactactgtctcactcaac
atcctgctggtagatggcttttcagagccctacctgcagttccaggatccaaccaagaat
tctagaaaggtaaatccatccactaaatatttggtcatttctctggccatcctttccttt
ctctttctcctctctgtcatagtgatcttcattatacatgtctaccaaaagattaaatat
agagaaaagttcacaattcaagagcatttctatgatgactgtaatttctctaacaacctg
gtacaaggacaaggcaatggatccttatctcagccttgtccatatgaaatgtgttcagcc
actggcactggtaatagtgagtttcgctttcttaagcgttttatgcccaacttccctttc
ccacatgccactggggagataaaaatggaggctggctccagtttgcccccaaattctgat
aggaataagtctcggagatcagagggccatgaccaggtatctgatgactatatgtag
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