Pongo abelii (Sumatran orangutan): 100448714
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Entry
100448714 CDS
T01416
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100448714 (SOX1)
Transcription factors [BR:
pon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100448714 (SOX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100448714
NCBI-ProteinID:
XP_024086665
Ensembl:
ENSPPYG00000005512
UniProt:
H2NKC4
LinkDB
All DBs
Position
14:118351477..118354312
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AA seq
393 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGGGAKANQDRVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDY
KYRPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGAAAG
GGYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHA
HPHNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVA
AAAAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAA
AAAAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcccccacg
aacctctcgggccccgccggggcgggcggcggcgggggtggaggcgggggcggcggcggc
ggcggcggcgggggcgccaaggccaaccaggaccgggtcaagcggcccatgaacgccttc
atggtgtggtcccgcgggcagcggcgcaagatggcccaagagaaccccaagatgcacaac
tcggaaatcagcaagcgcctgggggccgagtggaaggtcatgtccgaggccgagaagcgg
ccgttcatcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattac
aagtaccggccgcgccgcaagaccaagacgctgctcaagaaagacaagtactcgctggcc
ggcgggctcctggcggccggcgcgggtggcggcggcgcagccgtggccatgggcgtgggt
gtgggcgtgggcgcggcggccgtgggccagcgcctggagagcccaggcgccgcggcgggc
ggcggctacgcgcacgtcaacggctgggccaacggcgcctaccccggctcggtggcggcg
gcggcggcggccgcggccatgatgcaggaggcgcagctggcctacgggcagcacccgggc
gcgggcggcgcgcacccgcacgcgcaccccgcgcacccgcatccgcaccacccgcacgca
cacccgcacaacccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagcccc
atctccaactcgcagggctacatgagcgcgtcgccctcgggctacggcggcctcccctac
ggcgccgccgccgccgccgctgccgctgcgggcggcgcgcaccagaactcggcagtggct
gcggcggcggcggcggcggccgcgtcgtcgggcgccctgggcgcgctgggctctctggtg
aagtcggagccgagcggcagcccgcccgccccggcgcactcgcgggcgccgtgccccggg
gacctgcgcgagatgatcagcatgtacttgccggccggcgaggggggcgacccggcggcg
gcagcagcggccgcggcgcagagccggctgcactcgctgccgcagcactaccagggcgcg
ggcgcgggcgtgaacggcacggtgcccctgacgcacatctag
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