Pongo abelii (Sumatran orangutan): 100449014
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Entry
100449014 CDS
T01416
Symbol
ABRAXAS1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1 isoform X1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100449014 (ABRAXAS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pon03400
]
100449014 (ABRAXAS1)
DNA repair and recombination proteins [BR:
pon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
100449014 (ABRAXAS1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
HMMR_C
DUF2096_N
DUF7310
DUF16
DUF948
DUF5798
PRC2_HTH_1
Motif
Other DBs
NCBI-GeneID:
100449014
NCBI-ProteinID:
XP_002814983
Ensembl:
ENSPPYG00000036982
UniProt:
A0A663D977
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Position
3:complement(104753289..104783621)
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AA seq
409 aa
AA seq
DB search
MEGESTSAVLSGFVLGALAFQHLNTDSDTEGFLLGEVKGEAKNSITDSQMDDVEVVYTID
IQKYIPCYQLFSFYNSSGEVNEQALKKILSNVKKNVVGWYKFRRHSDQIMTFRERLLHKN
LQEHFSNQDLVFLLLTPSIITESCSTHRLEHSLYKPQKGLFHRVPLVVANLGMSEQLGYK
TVSGSCMSTGFSRAVQTHSSKFFEEDGSLKEVHKINEMYASLQEELKSICKKVEDSEQAV
DKLVKDVNRLKREIEKRRGAQIQAAREKNIQKDPQENIFLCQALRTFFPNSEFLHSCVMS
LKNRHVSKSSCNYNHHLDVVDNLTLMVEHTDIPEASPASTPQIIKHKALDLDDRWQFKRS
RLLDTQDKRSKTDTDSSNQDKASKMSSPETDEEIEKMKGFGEYSRSPTF
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagggggagagtacgtcggcggtgctctcgggctttgtgctcggcgcactcgccttc
cagcacctcaacacggactcggacacggaaggttttcttcttggggaagtaaaaggtgaa
gccaagaacagcattactgattctcaaatggatgatgttgaagttgtttatacaattgac
attcagaaatatattccatgctatcagctttttagcttttataattcttcaggtgaagta
aatgagcaagcactgaagaaaatattatcaaatgtcaaaaagaatgtggtaggttggtac
aaattccgtcgtcattcagatcagatcatgacgtttagagagaggctgcttcacaaaaac
ttgcaggagcatttttcaaaccaagaccttgtttttctgctattaacaccaagtataata
acagaaagctgctctactcatcgactggaacattccttatataaacctcaaaaaggactt
tttcacagggtacctttggtggttgccaatctgggcatgtctgaacaactgggttataaa
actgtatcaggttcctgtatgtccactggttttagccgagcagtacaaacacacagctct
aaattttttgaagaagatggatccttaaaggaggtacataagataaatgaaatgtatgct
tcattacaagaggaattaaagagtatatgcaaaaaagtggaagacagtgaacaagcagta
gataaactagtaaaggatgtaaacagattaaaacgagaaattgagaaaaggagaggagca
cagattcaggcagcaagagagaagaacatccaaaaagaccctcaggagaacatttttctt
tgtcaagcattacggaccttttttccaaattctgaatttcttcattcgtgtgttatgtct
ttaaaaaatagacatgtttctaaaagtagctgtaactacaaccaccatctcgatgtagta
gacaatctgaccttaatggtagaacacactgacattcctgaagctagtccagctagtaca
ccacaaatcattaagcataaagccttagacttagatgacagatggcaattcaagagatca
cggttgttagatacacaagacaaacgatctaaaacagatactgatagtagtaaccaagat
aaagcgtccaaaatgagcagcccagaaacagatgaagaaattgaaaagatgaagggtttt
ggtgaatattcacggtctcctacattttga
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