Pongo abelii (Sumatran orangutan): 100449261
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Entry
100449261 CDS
T01416
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04110
Cell cycle
pon04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100449261 (SMC1B)
04114 Oocyte meiosis
100449261 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pon03036
]
100449261 (SMC1B)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100449261 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
100449261 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
100449261
NCBI-ProteinID:
XP_024095826
Ensembl:
ENSPPYG00000011933
LinkDB
All DBs
Position
23:complement(51868383..51937778)
Genome browser
AA seq
1235 aa
AA seq
DB search
MGHLELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKT
IQELIHGAHIGKPISSFASVKIVYVEKSGEEKTFARIIRGRCSEFRFDDNLVSRSVYIAE
LEKIGIIVKAQNCLVFQGTVESISMKKPKERTQFFEEISSSGELIGEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERRQAKLEKEEAERYQSLLEELKMNKIQLKLFQLYHNEKKIHLLNT
KLEHVNRDLSVKRESLSHHENIVKARKKEHGMLTRQLQQTEKELKSVETLLNQKRPQYIK
AKENTSHHLKKLDVAKKSVKDSEKQCSKQEDDIKALETELADLDAAWRSFEKQIEEEILH
KKRDIELEASQLDRYKELKEQVRKKVATMTQQLEKLRWEQKTDEERLAFEKRRHGEVQGN
LKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVDEIEKTKSRMSEVNEELNLI
RSELQNAGIDTHEGKRLQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YITAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLRELKGCKMVIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFSGPERQKTVALDGTLFLKSGVISGGSTDLK
YKARCWDEKELKNLRDRRSQKIQELKDLMKTLRKETDLKQIQTLVQGTQTRLKYSQNELE
MIKKKHLVAFYQEQSQLQSELLNIESQCIMLSEGIKERQRRIKEFQEKIDKVEDDIFQHF
CQEIGVENIREFENKHVKRQQEIDQKRLEFEKQKTRLNIQLEYSRNQLKKKLNKINTLKE
TIQKGSEDIDHLKKAEENCLQTVNELMAKQQQLKDIRITQNSNAEKVQTQIEEERKKFLA
VDREVGKLQKEVVIIQTSLEQKRLEKHNLLLDCKVQDIEIILLSGSLDDIIEVEMGTEAE
STQATIDIYEKEEAFEIDYSSLNEDLKALQSDQEIEAHLRLLLQQVASQEDILLKTAAPN
LRAMENLKTVRDKFQESTDAFEASRKEARMCRQEFEQVKKRRYDLFTHCFEHVSISIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQDQFQMIVISLKEEFYSRADALIGIY
PEYDDCMFSRVLTLDLSQYPDTEGQESSKRHGESH
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggccacctagagctgctgcttgtggaaaatttcaagtcgtggcggggccgccaggtc
attggccccttccggaggttcacctgcatcatcggccccaacggctctggaaaatctaat
gtaatggatgcacttagttttgtaatgggagagaaaatagctaatttaagagtgaaaact
attcaagaactcattcatggagcacatattggaaaacctatttcttcttttgcaagtgta
aaaattgtatatgtggaaaaaagtggcgaagagaaaacatttgcaaggattatccgaggg
agatgctcagaatttcgctttgatgataatcttgtgagtcgttctgtttacattgcagag
ttggaaaagataggcataatagtcaaagcacaaaattgtttagtttttcagggaactgta
gagtcaatttcaatgaagaaacccaaagaaaggacccagttttttgaggaaatcagcagt
tcaggagagcttataggagaatatgaagaaaagaaaagaaagttacaaaaagccgaagag
gatgcacagtttaattttaataagaaaaaaaatgtagcagcagagcgcagacaagcaaaa
ttagagaaggaagaggcagaacgttaccagagtctccttgaagaactgaaaatgaacaag
atacaactgaaactttttcaactataccataatgagaaaaagattcatctcctgaacaca
aagttagagcatgtgaatagggatttgagtgtcaaaagagagtctttgtctcatcatgaa
aacatagttaaagccaggaaaaaggaacatggaatgctaactagacaactacaacaaaca
gaaaaagaattaaagtcagttgaaacccttttaaatcagaagaggcctcagtacattaaa
gccaaagaaaacacttctcaccaccttaagaaattagatgtggctaagaaatcagtaaag
gacagcgaaaaacaatgttctaaacaggaagatgatataaaagccctggagacagagctg
gctgatttagatgctgcatggagaagttttgaaaagcagattgaggaagaaattttacat
aaaaagcgagacattgaactggaagccagtcagctggatcgttataaagaacttaaggaa
caagtaagaaagaaagtagctacaatgactcaacaactggaaaaactgcggtgggaacag
aagacagatgaagaaagactggcatttgaaaagaggaggcatggagaagttcagggaaat
ctaaaacaaataaaagaacaaatagaagatcataaaaaacgaatagagaagttagaggag
tatacaaagacatgcatggattgcttgaaagagaaaaaacagcaagaggaaaccctagtg
gatgaaattgaaaaaacaaaatcaagaatgtctgaagttaatgaagaattgaatctcatt
agaagtgaattgcagaatgctgggattgatacccatgaaggaaaacgtctgcaaaagaga
gcagaggttctggaacaccttaaaagactgtacccagattctgtgtttggaagactactt
gacctgtgtcatcctattcataagaaataccagctggctgttactaagctttttggccgg
tacatcactgccattgttgtagcctctgaaaaggtggcaaaagattgtattcgatttctg
aaggaggaaagagctgaacctgagacattcctcgctctagattaccttgatatcaagcca
atcaatgaaagattaagggagcttaaaggctgtaaaatggtgattgatgtcataaagact
cagtttcctcagctgaagaaagtgattcagtttgtgtgtggaaatggtcttgtttgtgag
actgtggaagaagcaaggcatattgcattcagtggacctgaaagacagaaaacagtagct
cttgatggaacattatttttaaaatctggagtgatctctggagggtcaactgacttaaag
tacaaggctagatgctgggatgagaaagagttaaagaatctaagagacagacgaagccag
aaaatccaagagctaaaggatttaatgaagacactccgcaaagaaacagatttgaaacaa
atacagaccctggtacaaggaactcaaacacgactcaaatattcacaaaatgaactagag
atgattaaaaagaagcaccttgttgctttttaccaggaacaatctcagctacaaagtgaa
ctactaaatattgagtctcaatgtattatgttgagtgaaggaatcaaggaacgacaacga
agaattaaagaatttcaagaaaagatagataaggtagaagatgatatcttccaacacttc
tgtcaagaaattggcgtggaaaatattcgtgaatttgagaacaaacatgttaaacggcaa
caagaaattgatcaaaaaagattagaatttgaaaaacaaaaaactcggcttaatattcaa
cttgagtatagtcgcaatcagcttaagaagaaactgaataagatcaacacattaaaagaa
actatccagaaaggtagtgaagatattgatcacctaaagaaggctgaagaaaactgtctg
cagacagtgaatgagctcatggcaaagcagcagcaacttaaggacatacgtatcactcag
aactccaatgccgagaaagttcaaactcaaattgaagaggaacggaagaagtttctggct
gttgatagggaagtggggaaattgcaaaaagaagttgtaattattcaaacttctctggaa
cagaaacgattagagaagcataacttgctgcttgattgcaaagtgcaagacattgagata
atccttttgtcggggtcactggatgacatcattgaagtggagatgggaactgaagcagaa
agtacgcaggcaacaattgatatctatgaaaaagaagaagcctttgaaatagactacagc
tctctaaacgaggatttgaaggctctacagtctgatcaagaaatcgaggcccaccttaga
ctcttattgcagcaagtagcatcccaggaagatatcttattgaaaacagcagccccaaac
ctacgagcaatggagaacttaaagactgtcagagacaagtttcaagaatccacagatgct
tttgaggccagcagaaaggaagccagaatgtgtaggcaagagttcgaacaagtgaaaaaa
aggagatacgatcttttcacccactgttttgagcatgtctcaatctcaattgatcaaatc
tacaagaagctctgcagaaacaacagcgcgcaagcatttcttagcccagagaaccctgaa
gaaccttacttggagggaattagctataactgtgtggccccaggcaaacggtttatgcca
atggacaatttgtcagggggagaaaagtgtgtggcagccttggctctcctgtttgccgtg
cacagttttcgtcctgccccattctttgttttagatgaagtggatgcagccctagacaat
actaacataggcaaagtgtcaagttacatcaaagagcaaactcaagaccagtttcagatg
atagtcatctccctaaaagaagagttctattccagagccgacgcgctgatcggcatctat
cctgagtacgatgactgcatgttcagccgagttttgaccctagatctttctcagtatcca
gacactgaaggccaagaaagcagcaagagacacggagagtcccactag
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