Pongo abelii (Sumatran orangutan): 100449548
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Entry
100449548 CDS
T01416
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X4
KO
K12821
pre-mRNA-processing factor 40
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100449548 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pon03041
]
100449548 (PRPF40B)
Spliceosome [BR:
pon03041
]
Complex A
U1 snRNP components
U1 related factors
100449548 (PRPF40B)
Complex B
100449548 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
100449548
NCBI-ProteinID:
XP_002823243
Ensembl:
ENSPPYG00000004492
UniProt:
A0A663DGS6
LinkDB
All DBs
Position
10:47402257..47423453
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AA seq
892 aa
AA seq
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MSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGI
LPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALW
SEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKE
SRWTRPKDLDDLEVLVKQEAAGKQQQQLPQTLQPQPPQPQPDPPPAPPGPTPVPTGLLEP
EPGGSEDCDVLEATQPLEQGFLQQLEEGPSSSGQHQPQQEEEESKPEPERSGLSWSNREK
AKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEE
ARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFL
AKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKE
DALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWME
LYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTA
FEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLR
QAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLETECQHLHTKGRKHG
RKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGVAL
GGRGSPSSHLLGADHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEQEQDK
DRELQQAELPNRSPGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccgattctggtccccggcccccagcagcgcctgcccccttcccaccgggg
ccccccatgatgccaccacccttcatgccccctccagggatccccccaccctttcctccg
atggggctaccccccatgagtcagagaccaccagctataccccccatgccacctggcatc
ctgcccccaatgcttccaccaatgggggcaccaccaccactcacacagataccaggaatg
gtacctccgatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacggct
ccgggtgcggacaccgccagctctgctgtggctgggacaggccctccgagggccctatgg
agtgagcatgtggccccagatgggcgcatctactactacaatgctgacgacaagcagtcc
gtgtgggagaagcccagcgtgctcaagtccaaggcagagctgctcctgtctcagtgtccc
tggaaagagtacaagtcggacacaggcaaaccttattactataacaaccagagtaaagag
tctcgctggacccggcccaaggatctggatgacctagaggttctagtcaaacaagaggct
gcagggaaacagcagcagcagctgccacagacacttcagccacagccgcctcagccacag
cctgaccccccacctgcacctcctggccccaccccagtgcccacaggcctcctggaacct
gagccaggtgggagtgaagactgtgatgtgttggaggccacccagcccctggaacagggg
ttcctgcagcagctggaggagggccccagcagttctggacagcatcagccacagcaggag
gaggaggaatcaaagccagaaccagagaggtctggcctcagttggagcaaccgggagaag
gcaaagcaggcattcaaggaactgctgagggacaaggctgtcccctctaatgcctcatgg
gaacaggccatgaagatggtggtcaccgacccccgttacagtgccttgcctaaactgagt
gagaaaaagcaggcattcaatgcctacaaggcgcagcgggagaaggaggagaaggaggag
gcccggctaagggccaaagaggccaagcagaccctgcagcatttcctggagcagcacgaa
cgcatgacctccaccacccgctaccggcgggcagaacagacctttggggagctggaggtc
tgggctgtggtccctgagagggatcgaaaagaggtttatgatgatgtcctcttcttcctg
gccaagaaggagaaggaacaggccaagcagctccggcgccgcaatatccaggccctaaag
agcatcctggatgggatgagtagtgtcaacttccaaaccacatggtcccaggcccagcag
tacctcatggataaccccagctttgctcaggaccatcagctgcagaacatggacaaggaa
gatgcactgatctgttttgaggagcacatccgagctttggagagggaagaggaggaggaa
cgggagcgggcccggcttcgggagcgacgccaacaacgcaagaatcgggaggccttccag
acctttctggacgagctgcacgagacagggcagctgcactctatgtccacctggatggag
ctatatccagcagtcagcactgatgtccgctttgccaacatgctgggccagccgggctcc
acccctctggacttgttcaagttctatgtggaggagttgaaggcacgattccatgatgaa
aagaagatcattaaggacatccttaaggaccggggcttctgcgtggaggtgaacacggcc
tttgaggacttcgcccacgtcataagctttgacaagagggctgccgcactggatgcaggc
aacatcaagctgaccttcaatagtctgctggagaaagcagaggcacgggagagggagcgg
gagaaggaggaggcacgcaggatgcggcgcagggaagctgcctttcgaagcatgctgagg
caggctgtgcctgctctggagctaggcactgcctgggaagaggtccgtgagcgttttgtg
tgtgactcagcctttgagcagatcaccctggagtcggagcggatccggctcttccgggag
ttcctacaggtgctggagactgaatgccagcacctccacaccaaaggccgaaagcatggc
aggaaaggcaagaagcaccatcgcaagcgttcccactcaccctcaggctctgagtcagaa
gaagaggagctgcccccaccatctctccggccccccaagcggaggaggcggaacccctca
gagtcaggctctgagccctcttcctcacttgattcagttgaaagtgggggtgttgccctt
ggaggacggggctccccttcctcccatcttcttggagcagatcatggccttcggaaagcc
aagaaaccaaaaaagaaaactaagaagagaagacacaagtcgaatagtcctgagagtgag
acagaccctgaggagaaagctggcaaggagagcgatgagaaagaacaagaacaggacaag
gacagggagctccagcaggcagagctccctaaccgttccccaggctttggaatcaagaag
gagaagacaggctgggacacgtcagaaagtgagctgagtgagggtgagctggagaggcgg
cggcggacactcctacagcagctggacgatcaccagtga
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