Pongo abelii (Sumatran orangutan): 100449715
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Entry
100449715 CDS
T01416
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04390
Hippo signaling pathway
pon04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100449715 (LIMD1)
04392 Hippo signaling pathway - multiple species
100449715 (LIMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100449715 (LIMD1)
03036 Chromosome and associated proteins [BR:
pon03036
]
100449715 (LIMD1)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100449715 (LIMD1)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
100449715 (LIMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf-ChsH2
Motif
Other DBs
NCBI-GeneID:
100449715
NCBI-ProteinID:
XP_009237395
Ensembl:
ENSPPYG00000013945
UniProt:
H2PAY9
LinkDB
All DBs
Position
2:complement(108800825..108889024)
Genome browser
AA seq
676 aa
AA seq
DB search
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKGTGNNPEFEETRRVFATKMAKIHLQQQ
QQQLLQEETLPRGSRGPANGGGRLGPQARREVVGSKLSVDGAAKPPLAASTGAPGAVTTL
AAGQPPYPPQEQRSRPYLHGTRHGSQDCGSRESPATSEMSAFHQPGPCEDPSCLTHGDYY
DNLSLASPKWGDKPGVSPSIGLSVGSGWPGSLGSDPPLPKPCGDHPLNHRQLSLSSSRSS
EGSLGGQNSGIRGRSSEKPTGLWSTASSQRVSPGLPSPNLENGAPVLGPVQPRTPSVSAP
LALSCPRQGGLPRSNSGLGGEVSGVMSKPNVDPQPWFQDGPKSYLSNSAPSSSPAGLDSS
QQGAVPGLGPKPGCTDLGTGPKLSPTSLVHPVMSTLPELSCKEGPLGWSSDGSLGPVLLE
SPSSPRVRLPCQPLVPGPELRPSAAELKLEALTQRLEREMDAHPKADYFGACVKCSKGVF
GAGQACQAMGNLYHDTCFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLC
GHLIMDMILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAAC
GLPILPPEGSDETIRVVSMDRDYHVECYHCEDCGLELNDEDGHRCYPLEDHLFCHSCHVK
RLEKRPSSTALHQHHF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggataagtatgacgacctgggcctggaggccagtaaattcatcgaggacctgaacatg
tatgaggcctccaaggatgggctcttccgagtggacaagggtacaggcaacaaccccgag
tttgaggaaactcgcagggtgttcgccaccaagatggccaaaatccacctccagcagcag
cagcagcagctcctgcaggaggagaccctgcccaggggtagcagaggccctgccaatgga
gggggccgcctgggcccacaggcccgtcgggaagttgtgggcagcaagctgagtgtggat
ggtgctgccaagcctcctcttgctgcctcgacaggggcacctggggcagtcaccaccctc
gctgctgggcagcccccatacccaccgcaggagcagagatccaggccatacctgcatggc
acaaggcatggcagccaggactgtggttccagggagagcccagcgacttctgagatgtct
gctttccaccagccaggcccctgtgaggatccttcctgcctcactcacggagactattac
gacaacctctctttggcaagcccaaagtggggtgacaaaccaggagtgtcccccagcatc
ggcctgagtgtagggagtgggtggcctggctccctggggagtgacccaccactgcccaaa
ccctgcggggaccatcccctaaatcaccgacagctctctctgagctccagcaggtcttct
gagggtagcctcggtggtcagaatagtggcattcgtggccgcagcagcgagaagccaaca
ggcctttggtccactgcctcctcccagcgggtgagccctggcctgccttccccaaacttg
gagaacggagcaccagttctggggcctgttcagcccaggaccccttctgtgtcagcaccc
ctggccctgagctgccccaggcaaggaggtcttccaagatcaaactcggggctggggggt
gaggtttcaggtgtgatgtccaaacccaatgtggacccccaaccctggttccaggatggg
cccaaatcttacctttccaattctgccccgtcatcctcgccagctggcctggacagttca
cagcagggtgcagtccctgggctggggccgaagcctggctgcacagaccttggcactggt
cccaagctcagccccaccagtcttgtccatccagtgatgtccaccctgcctgagttatct
tgtaaagagggtcccctgggctggtcttctgatggtagcctgggacctgtgctgctggag
agccccagctcccctagggtaaggctgccctgccagcccctcgtcccaggtcctgagctg
agaccctctgctgctgagttgaaattagaagccctcacccaacgtctggagcgagagatg
gatgctcacccgaaggctgattactttggagcctgtgtgaaatgcagcaaaggggtgttt
ggggctggccaggcctgtcaggccatggggaacctctaccatgacacatgcttcacctgt
gcagcttgcagccggaagctgagaggaaaagccttttattttgtcaacggcaaagtgttt
tgtgaagaggacttcctgtactctggtttccagcagtcggctgacaggtgttttctttgt
ggacatctgatcatggacatgatcctgcaagccctggggaagtcctaccaccccggctgt
ttccgctgtgtcatctgtaatgagtgtttggatggggtgcccttcaccgtggactcagag
aacaagatctactgtgtccgagattaccacaaggtgctggcccccaagtgtgcagcctgt
gggcttcccatccttccacctgagggttcagatgagaccatccgtgtcgtgtccatggac
agagactaccacgtggagtgttaccactgtgaggactgtggtctggagctcaatgatgaa
gatggccatcgctgttatccgctggaggaccacctgttctgtcactcctgccacgtgaag
aggctggagaagagaccctcatctacagcccttcaccagcaccacttctag
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