KEGG   Pongo abelii (Sumatran orangutan): 100450089
Entry
100450089         CDS       T01416                                 
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pon03019]
    100450089 (GEMIN5)
   03041 Spliceosome [BR:pon03041]
    100450089 (GEMIN5)
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100450089 (GEMIN5)
   mRNA cycle factors
    P-body specific factors
     100450089 (GEMIN5)
Spliceosome [BR:pon03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    100450089 (GEMIN5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_RIG_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_RFWD3 MIOS_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_LRRK2 Tricorn_2nd
Other DBs
NCBI-GeneID: 100450089
NCBI-ProteinID: XP_002816156
Ensembl: ENSPPYG00000015978
UniProt: H2PH61
LinkDB
Position
4:complement(163578128..163627545)
AA seq 1508 aa
MGQEPRTLPPSPNWYCARCSDAVPGGLFGFAARTSVFLVRVGPGAGESPGTPPFRVIGEL
VGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDVETKTVVTEHALHQHTISTLHWSPR
VKDLIVSGDEKGVVFCYWFNRNDSQHLFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIID
ISKKGEVIHRLRGHDDEIHSIAWCPLPGEDCLSINQEETSEEAEITNGNAVAQAPVTKGC
YLATGSKDQTIRIWSCSRGRGVMILKLPFLKRRGGGIDPTVKERLWLTLHWPSNQPTQLV
SSCFGGELLQWDLTQSWRRKYTLFSASSEGQNHSRIVFNLCPLQTEDDKQLLLSTSMDRD
VKCWDIATLECCWTLPSLGGFAYSLAFSSVDIGSLAIGVGDGMIRVWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPIKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP
PVPPMSLGGEGDRPSLALYSCGGEGIVLQHDPWKLSGEAFDINKLIRDTNSIKYKLPVHT
EISWKADGKIMALGNEDGSIEIFQIPNLKLICTIQQHHKLVNTISWHHEHGSQPELSYLL
ASGSNNAVIYVHNLKTVIESSPESPVTITEPYRTLSGHTAKITSVAWSPHHDGRLVSASY
DGTAQVWDALREEPLCNFRGHRGRLLCVAWSPLDPDCIYSGADDFCVHKWLTSMQDHSRP
PQGKKSIELEKKRLSQPKPKPKKKKKPTLRTPVKLESIDGNEEESMKENSGPVENVVSDQ
EGEEEAQEPELPCGLAPAVSREPVICTPVSSGFEKSKVTINNKVILLKKEPPKEKPETLI
KRRKARSLLPLSTSLDHRSKEELHQDCLVLATAKHSKELNEDVSADLEERFHLGLFTDRA
TLYRMIDIEGKGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDNLVAMAPAAGYHV
WLWAVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVELLKSNHFYREAIAIAKARLRPEDP
VLKDLYLSWGTVLERDGHYAVAAKCYLGATCAYDAAKVLAKKGDAASLRTAAELAAIVGE
DELSASLALRCAQELLLANNWVGAQEALQLHESLQGQRLVFCLLELLSRHLEEKQLSEGK
SSSSYHTWTTGTEGPFLQRVTAVWKSIFSHDTPEQYQEAFQKLQNIKYPSATNNTPAKQL
LLHICHDLTLAVLSQQMASWDEAVQALLRAVVRSYDSGSFTIMQEVYSAFLPDGCDHLRD
KLGDHQSPATPAFKSLEAFFLYGRLYEFWWSLSRPCPNSSVWVRAGHRTLSVETSQQLDT
ASTEETDTETSQPEPNRPSELDLRLTEEGERMLSTFKELFSEKHASLQNSQRTVAEVQET
LAEMIRQHQKSQLCKSTANGPDKNEQEVEAEQPLCSSQSQCKEEKNEPLSLPELTKRLTE
ANQRMVKFPESIKAWPFPDVLECCLVLLLIRSHFPGCLAQEMQQRAQELLQKYGNTKTYR
RHRQTFCM
NT seq 4527 nt   +upstreamnt  +downstreamnt
atggggcaggagccgcggacgctgccgccctcccccaactggtactgcgcccgctgcagc
gatgccgtgcccgggggcctctttggcttcgccgcgcggacctctgtcttccttgtccgc
gtgggccccggcgcaggcgagagtccagggacacccccgtttcgagtcataggagagttg
gtgggacacaccgaaagggtctctggcttcacattttctcatcaccctggtcagtacaac
ctctgtgccaccagctccgacgatgggactgtgaaaatatgggatgtagagacaaaaaca
gttgtgacagaacatgcactccatcagcatacaatatcaacattacattggtctcctcga
gtaaaggacttaatagtatctggggatgaaaaaggagtggttttctgttactggtttaac
agaaacgacagccagcacctgtttatagaacccaggacaattttctgtcttacttgttca
cctcatcatgaagatttagtagccattggctacaaggatggcatagtggtgataattgac
atcagtaagaaaggagaagttattcataggcttcgaggccatgatgatgaaatccactcc
atagcctggtgtcccctgcctggtgaagattgtttatctataaaccaagaggaaacttca
gaagaagctgaaattaccaacgggaatgctgtagcacaagctccagtaacaaaaggctgc
tacttagccactggaagcaaagatcaaaccattcgaatctggagctgttctagaggccga
ggggtgatgattttgaaattgccctttctgaagagaagaggagggggtatagacccaact
gttaaagagcgcctttggttgaccctccattggcccagcaatcagccaacacagctggta
tctagctgttttggaggtgaactgttgcaatgggatctcactcaatcttggagacggaaa
tacaccctcttcagtgcctcatcagaagggcaaaatcattcaagaattgtgtttaattta
tgtcctttacaaacagaggatgacaaacagctgttactttctacatcaatggatagagat
gtaaaatgttgggacatagccaccctggagtgctgctggaccctgccttcccttggtggg
tttgcatacagcctggctttctcttctgtggacataggctctttggccataggtgttggg
gatggcatgatccgtgtatggaatacactctctataaagaacaactatgatgtgaaaaat
ttttggcaaggtgtcaagtccaaggttacagcgctgtgctggcacccaatcaaggaaggt
tgcttagcttttggaactgatgatggaaaagtgggattgtatgacacctactccaacaag
cctccacagatttctagcacatatcataagaagactgtatatactttagcctgggggcca
ccagtaccccccatgtcacttggaggagaaggagacagaccttcccttgctttatacagc
tgtggaggagaagggattgtcttacagcatgacccctggaagcttagtggagaagccttt
gacatcaacaaactcatcagggacaccaattcaatcaaatacaaattgcctgtacacaca
gagataagttggaaagcagatggcaaaatcatggctcttggcaatgaagatggatcaata
gaaatatttcagattcccaacctgaaactgatctgtactatccaacagcatcacaagctt
gtgaataccattagctggcatcatgagcatggcagccagccagaactgagctatctgttg
gcctctggctccaacaatgcagtaatttacgtacacaacctgaagactgtcatagagagt
agccctgagtctccagtgaccattacagagccctaccggaccctctcagggcatacggcc
aagattaccagtgtggcgtggagcccacatcatgatggaaggctggtatctgcttcctat
gatggtacagcccaggtgtgggatgctctccgggaagagcccctgtgcaatttccgagga
catcgaggtcgactgctttgtgtggcatggtctcctttggatccagactgcatctattca
ggggcagatgacttttgtgtgcacaagtggctcacttccatgcaagatcattcccggcct
cctcaaggcaaaaaaagtattgaattagagaaaaaacggctctctcaacctaagccaaag
cccaaaaagaagaaaaagcccaccttgagaactcccgtaaagctggaatcgattgatgga
aatgaagaagagagcatgaaggagaactcgggacctgttgagaatgttgtgtcagaccaa
gaaggggaggaggaagcacaggagccagaattaccctgtggccttgctccagcagtttct
agagaaccagttatctgcactccagtttcctcaggctttgaaaagtcaaaagtcaccatt
aataacaaagtcattttactgaaaaaggagccaccaaaagagaagccagaaaccttaatc
aagaggagaaaagctcgttccttgcttcccctgagtacaagcctggaccacagatccaaa
gaggagcttcatcaggactgtttggtactagcaactgcaaagcactccaaagagctgaat
gaagatgtgtctgctgatcttgaggaaagatttcatctggggcttttcacagacagagct
accctgtacagaatgattgatattgaaggaaaaggtcacttagaaaatggccaccctgag
ttatttcaccagcttatgctttggaaaggagatctcaaaggtgttctccagactgcagca
gaaagaggggagctgacagacaaccttgtggctatggcaccagcggctggctaccatgtg
tggctatgggctgtggaagcttttgccaaacagctgtgctttcaggatcagtatgtcaag
gctgcttctcacctactttccatccacaaagtgtatgaagctgtggagctgctcaagtca
aaccatttttacagggaagctattgcgattgccaaggcccggctgcgcccagaagaccca
gtcctgaaagacttgtacctcagctggggaaccgtcctagaaagagatggccactatgcc
gtagcagccaaatgctatttaggcgccacttgtgcttatgatgcagccaaagttttggcc
aaaaagggggatgcggcatcacttagaacggctgcagagttggctgccatcgtaggagag
gatgagttgtctgcttccctggctctcagatgtgcccaagagctgcttctggccaacaac
tgggtgggagcccaggaagccctgcagctgcatgaaagtctacagggtcagagattggtg
ttttgccttctggagctactgtccaggcatctggaggaaaagcagctttcagagggcaaa
agctcctcctcttaccacacttggaccacgggcactgaagggcctttcctgcagagggtg
actgcagtgtggaagagcatcttcagccatgacacccctgagcagtatcaggaagccttt
cagaagctgcagaacatcaagtacccatctgctacaaataacacgcctgccaaacagctc
ctgcttcacatttgccatgacttgaccctggcagtgctgagccaacagatggcctcctgg
gacgaggctgtgcaggcgctccttcgggcagtggtccggagctatgactcagggagcttc
accatcatgcaggaagtgtactcagcctttctccctgatggctgtgaccacctaagagac
aagttgggggaccatcaatcccctgccacaccagctttcaaaagtttggaggcctttttt
ctttatgggcgtctgtatgaattctggtggtctctctccaggccttgcccaaattccagt
gtctgggtaagggctggtcacagaacactctctgttgagacaagccagcagttagacact
gccagcactgaagaaacggacactgaaacttctcagccagagccaaacaggccttcagaa
ctagacttgagactcacagaagaaggtgagcgaatgctgagtacttttaaggagctcttt
tcagaaaagcatgccagtctccaaaactcacagagaaccgttgctgaagtccaagagact
ttggcagaaatgatccgccaacaccagaagagtcaactctgtaaatccacagcaaatggt
cctgataagaatgaacaagaagtagaagcagagcagcccctctgcagttctcagagccaa
tgtaaagaagaaaaaaatgagccactttctctgcctgaattaaccaaaaggcttacagag
gcaaatcagagaatggtgaaatttcctgagagcattaaggcctggcccttcccagatgtg
ctggagtgctgcctcgtcctgcttctcatcaggtcccactttcctggctgtctggcacag
gaaatgcagcagcgggcccaagagctccttcagaaatacggcaacacgaaaacttacaga
agacaccgccagaccttctgcatgtga

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