KEGG   Pongo abelii (Sumatran orangutan): 100450094
Entry
100450094         CDS       T01416                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X4
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pon03400]
    100450094 (MDC1)
DNA repair and recombination proteins [BR:pon03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    100450094 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 100450094
NCBI-ProteinID: XP_024103912
Ensembl: ENSPPYG00000016418
LinkDB
Position
5:complement(30754259..30772592)
AA seq 2208 aa
MEDTQAIDWDVEEEEETEQSSESLRCNMEPVGRLHIFSGAHGPEKDFPLHLGKNVVGRMP
DCSVALPFPSISKQHAEIEILAWDKAPILRDCGSLNGTQILRPPKVLSPGVSHRLRDQEL
ILFADLLCQYHRLYVSLPFVSRGPLTVEETPRVQGGTQPQRLLLAEDSEEEVDFLSERLM
VKKSRTTSSSVIVPESDEEGHSPVLGSLGPPFAFNMNSDTDVEEGQQPATEEASSAARRG
ATIEAEQSEAEVVTEIQLEKDQPLVKERDDDTKVKRGAGNGVVPAGVILERSQPPGEDSD
TDVDDDSRPGRPAEVHLERAQPFGFIDSDTDAEEEGIPATPVVIPMKKRKIFHGVGTRGP
GAPGLTHLQESQAGSDTDVEEGNAPQAVPLEKSQASMVINSDTDDEEEVSAALTLARLKE
SQPAIWNRDAEEDMAQRVVLLQRSQTTTERDSDTDVEEEELPVENREAVLKGHTKIRALV
RAHSEKDQPPFGDSVEADKSSPGIHLERSQASTTVDINTQVEEEVPPGSAIIHIKKHQVS
VEGTNQTDVKAVGGPAKLLVVSLEEAWPPHGDCEIGAEEGTSLAASAVADVRKSQLPAEG
DAGAEWAATVLKQERAHEVGAQGGPPVAQVEQDLPISRENLTDLVVDTDTLGESTQPQRE
GAQVPTGREREQHVGGTKDSEDNYGDSEDLDLQATQCFLENQGLEAVQSMEDEPTQAFML
TPPQELGPSHCSFQTTGTLDEPWEVLATQPFCLRESEDSETQPSDTHLEAYGPCLSPPRA
IPGDQHPESPVHTEPMGIQGRGRQTVDKVMGIPKETAERVGPERGPLERETEKLLPERQT
DVTGEEELTKGIQDREQKQLLARDTQRQESDKNGKSASPERDWESLKVEIETSEEIQEKQ
VKKQTLPSKAFEREVERPVADRECEPAELEEKVPKVILERDTQRGEPEGGSQDQKGQASS
PTPEPGVGAGDLPGPTSAPVPSGSQSGGRGSPVSPRRHQKGLLNCKMPPAEKASRIRAAE
KASRGDQESPDACLPPTVPEAPAPPQKPLNSQSRKHLAPQPLLSPLLPSIKPTIHKTRQD
GSQEAAETPLSSELEPFYPKPKIITRKSSRMTPFPATSAAPEPHPSTSTAQPVTPKPTSQ
ATRSRTNRSSVKTSEPVVPAAPELQPSTSTDQPVTSEPTSQVTRGRKNRSSVKTPETVVP
TALELQPSTSTDRPVTSEPTSQATRGRKNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEP
TSQATRGRKNRSSVKTPKTVVPTDPELQPSTSTDQPVTSEPTSQATRGRKNRSSVKTPET
VVPTAPELQPSTSTDQPVTSEPTSQATRGRKNRSSVKTPETVVPTALELQPSTSTDRPVT
PKPTSQTTRSRTNMSSVKTCETVVPTAPELKPSTSTDQPVTPKPTSRTTRSRTNMSSVKT
PESTVPIAPELPPSTSTEQPVTPEPASQATTGRKNKSSVKTPETVVPTAPKLQPSTSTDQ
PITPEPTSQATRGRKNRSSVKTPETVVPTAPKLQPSTSTDQPVTPEPTSQATRGRTNRSS
VKTPETVVPTAPELQPSTSTDQPLTPEPTSQATRGRTDRSSVKTPETVVPTAPELQASAS
TDQPVTSEPTSRTTRGRKNRSSVKTPETVVPTAPELQPSTSIDQPVTPEPTSRATRGRTN
RSSVKNPESIVPIAPELQPSTSRNQLVTPEPTSRATRGRTNRSSVKTPEPVVPIAPEPHP
TTSTDQPVTPKLTSRATRRRTNRSSVKTPKPVEPAASDLEPFTPTDQPVTPEAIAQGGQS
KTLRSSTVRAMPLPTTPEFQSPVTTDQPISPEPIPQPSCIKSQRATGNPGSLAAPIDRKP
CSAPLEPKSQASRNQRWGAVRAAESLTAIPEPASPQLLETPTHASQIQKVEPAGRSRFTL
ELQPKASQSRKRSLATMDSPPHQKQPQRGEVSQKTVIIKEEEEDTAEKPAKEEDVVTPKP
GKRKRDQAEEEPNRIPSRSLRRTKLNQESTAPKVLFTGVVDARGEQAVLALGGSLAGSAA
EASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGFFLSPDEYVVTDPEQEKNFGF
SLQDALSRARERRLLEGYEIYVTPGVQPPPLQMGEIISCCGGTYLPSMPRSYKPQRVVIT
CPQDFPRCSIPLRVGLPLLSPEFLLTGVLKQEAKPEAFVLSPLEMSST
NT seq 6627 nt   +upstreamnt  +downstreamnt
atggaggacacccaggctattgactgggatgttgaagaagaggaggagacagagcaatcc
agtgaatccttgaggtgtaacatggagccagtagggcggctacatatctttagtggtgcc
catggaccagaaaaagatttcccactacaccttgggaagaatgtggtaggccgaatgcct
gactgctctgtggccctgccctttccatctatctccaaacaacatgcagagattgaaatc
ttagcctgggacaaggcacctatcctccgagactgtgggagccttaatggtactcaaatc
ctgagacctcctaaggttttgagccctggggtgagtcaccgtctgagggaccaggaattg
attctctttgctgacttgctctgccagtaccatcgcctgtatgtctctctgccctttgtc
tcccggggccctctgacagtagaagagacacccagggtacagggaggaactcaaccccag
aggcttctgttggctgaggactcggaggaggaagtagattttctttctgaaaggctcatg
gtaaaaaaatcaaggaccacatcttcctctgtgatagttccagagagtgatgaagagggg
cactcccctgtcctgggcagccttgggccgccttttgccttcaatatgaacagtgacaca
gatgtggaagaaggtcagcaaccagccacagaggaggcctcctcagctgccagaagaggt
gccactatagaggcagagcagtctgaagctgaagttgtaactgaaatccagcttgaaaag
gatcagcctttagtgaaggagagggacgatgatacaaaagtcaagaggggtgcagggaat
ggggtggttccagctggggtgattctggagaggagccaacctcctggagaggacagtgac
acagatgtggatgatgacagcaggcctggaaggccagctgaggtccatttggaaagggct
cagccttttggcttcatcgacagcgacactgatgcggaagaagaggggatcccagcaacc
ccagttgtcattcctatgaagaagaggaagatcttccatggagttggtacaaggggtcct
ggagcaccaggcctgacccatctgcaggagagccaggctggtagtgatacagatgtggag
gaaggcaatgccccacaggctgtccctctggagaaaagccaagcttccatggttatcaac
agcgatacagatgacgaggaagaagtctcagcagcgctgactttggcacgtctgaaagag
agccagcctgctatatggaacagagatgcagaagaggacatggcccaacgtgtggtcctt
ctgcagcgtagccaaaccaccactgagagagacagtgacacagacgtggaggaggaagag
ctcccggtggaaaatagagaagctgtcctcaagggtcacacaaagattagagcccttgtt
agagcacattcagaaaaggaccaacctccttttggggacagtgtggaagcagataagagc
tcacctgggatccacctggagagaagccaagcctccaccacagtggacatcaacacacaa
gtggaggaggaagttccgccagggtcagccattatacatataaagaagcatcaggtgtct
gtggaggggacaaatcaaacagatgtgaaagcagttgggggaccagcaaagctgcttgtg
gtatctctagaggaagcctggcctccgcatggggactgtgaaataggtgcggaggagggc
acctccttagcagcctcagcagttgcagatgtaagaaagagccagcttccagcagaaggg
gatgctggggcagagtgggctgcaactgttcttaagcaggagagagctcatgaggtgggg
gcccagggtgggccacctgtggcacaagtggagcaggacctccctatctcaagagagaac
ctcacagatctggtggtggacacagacactctaggggaatccacccagccacagagagag
ggagcccaggtccccacaggaagggagagagaacaacatgtgggtgggaccaaggactct
gaagacaactatggtgattctgaagatctggacctacaagctacccagtgctttctggag
aatcagggcctggaagcagtccagagcatggaggatgaacctacccaggccttcatgttg
actccaccccaagagcttggcccttcccattgcagcttccagacaacaggtaccctagat
gaaccatgggaggtcctggctacacagccattctgtctgagagagtctgaggactctgag
acccagccttctgacacccaccttgaggcctatggaccttgcctgtctccacctagggca
ataccaggagaccaacatccagagagcccagttcacacagagccaatggggattcaaggc
agagggaggcagactgtggataaagtcatgggtataccaaaagaaacagcagagagggtg
ggccctgagagagggccattggagagagagactgagaaactgctaccagaaagacagaca
gatgtgacaggagaggaagaattaaccaaggggatacaggacagagaacaaaaacagttg
ttagctagagacacccagagacaagaatctgacaaaaatgggaaaagtgcaagtcctgaa
agagattgggagagtttgaaggtagaaattgagacatccgaggaaatacaagagaaacaa
gtaaagaagcagacccttccaagcaaagcatttgagagagaagtagagagaccagtagca
gacagagagtgcgagccagccgagttagaagagaaggtgcccaaagtgatcctggagaga
gacacacagagaggggagccagagggagggagccaggaccagaaagggcaggcctccagc
ccaacaccagagcctggggtgggggcgggggaccttccgggacctacctcagcccccgta
ccttctgggagccagtcaggtggaaggggatccccagtgagccccaggaggcatcagaaa
ggcctcctgaattgcaagatgccacctgctgagaaggcttccaggatcagagctgctgag
aaggcttccaggggcgatcaggaatctccagatgcttgtctgcctcctacagtgcctgaa
gccccagccccaccccaaaagccccttaactctcagagccggaaacatcttgcacctcag
ccccttctttctccccttttaccttctatcaagccaaccattcataagaccaggcaagat
gggagtcaggaagctgcagagactcccttgtcctcagagctggagcctttctacccaaag
cctaaaatcataactcgaaagtcctccaggatgacaccctttccagctacctctgctgcc
cctgagccccacccttccacctccacagcccagccagtcactcccaagcccacatctcag
gccactaggagcaggacaaataggtcctctgtcaagacctctgaaccagttgtccccgca
gcccctgagctccagccttccacctccacagaccagcctgtcacctctgagcccacatct
caggttactaggggaagaaaaaatagatcttctgttaagacccctgaaacagttgtgccc
acagcccttgagctccagccttccacctccaccgaccgacctgtcacctctgagcccaca
tctcaggctactaggggaagaaaaaatagatcctctgtcaagacccctgaaccagttgtc
cccacagcccctgagctccagccttccacctccacagaccagcctgtcacctctgagccc
acatctcaggctactaggggaagaaaaaatagatcctctgtcaagacccctaaaacagtt
gtgcccacagaccctgagctccagccttccacctccacagaccagcctgtcacctctgag
cccacatcgcaggctactaggggaagaaaaaatagatcctctgtcaagacccctgaaaca
gttgtgcccacagcccctgagctccagccttccacctccacagaccagcctgtcacctct
gagcccacatcgcaggctactaggggaagaaaaaatagatcctctgtcaagacccctgaa
acagttgtccccacagcccttgagctccagccttccacctccacagaccgacctgtcacc
cctaagcccacatctcagaccactaggagcaggacaaatatgtcctctgtcaagacctgt
gaaacagttgtccccacagcccctgagctcaagccttccacctccacagaccaacctgtc
acccctaagcccacatctcggaccactaggagcaggacaaatatgtcctctgtgaagacc
cctgaatcaactgtccctatagcccctgagctcccaccttccacctccacagagcagcct
gtcacccctgagcctgcatctcaggctactacgggaagaaaaaataagtcctctgtcaag
acccctgaaacagttgtccccacagcccctaagctccagccttccacctccacagaccag
cctatcacccctgagcccacatctcaggctactaggggaagaaaaaatagatcctctgtc
aagacccctgaaacagttgtccccacagcccctaagctccagccttccacttccacagac
caacctgtcactcctgagcccacatctcaggccaccaggggcaggacaaatagatcctct
gtgaagacccctgaaacagttgtccctacagcccctgagcttcagccttccacctccaca
gaccagcctcttacccctgagcctacatctcaggctactaggggaagaacagatagatcc
tctgtcaagactcctgaaacagttgtccccacagcccctgagctacaggcttctgcctcc
acagaccagcctgtcacctctgagcccacatctcggaccactaggggaagaaaaaatcgg
tcctctgtcaagacccctgaaacagttgtgcccacagcccctgagctccagccttccacc
tccatagaccaacctgtcacccctgagcccacatctcgggccactaggggcaggacaaat
aggtcctctgtcaagaaccctgaatcaattgtccctatagcccctgagcttcagccttcc
acctccagaaaccagcttgtcacccctgagcccacatctcgggccactagaggcaggaca
aatagatcctctgtcaagacccctgaaccagttgtccccatagcccctgagccccatcct
accacctccacagaccagcctgtcacccccaagctcacatctagggccactaggagaagg
acaaataggtcctctgtcaagactcccaaaccagttgaaccagcagcctctgatcttgag
ccttttacccccacagaccagcctgtcacccctgaggccatagctcagggtggtcagagc
aaaacactgaggtcttccacagtaagagctatgccgcttcctaccacccctgaattccaa
tctcctgtcaccacagaccagcctatttcccctgagcctattcctcaacccagttgcatc
aagagtcagagagccactgggaatcctggctccctcgcagctcccattgaccgtaagcct
tgctctgcacccttggaacctaaatcccaggcctcaaggaaccaaagatggggagcagtg
agagcagctgaatcccttacagccattcctgagcctgcctctccccagcttcttgagaca
ccaactcatgcctcccagatccaaaaggtggaaccagcaggtagatctaggttcaccctg
gagctccagcctaaggcctctcaaagccgcaagaggtctttagctaccatggattcacca
ccacatcaaaaacagccccaaagaggggaagtctcccagaagacagtgattatcaaggaa
gaggaagaagatactgcagagaagccagcgaaggaagaggatgtcgtgactccaaaacca
ggcaagagaaagagagaccaggcagaggaggagcccaacagaataccaagccgcagcctc
cgacggaccaaacttaaccaagaatcaacagcccccaaagtgctcttcacaggagtggtg
gatgctcggggagagcaggctgtgctggcactggggggaagtctggctggttcagcggca
gaggcttcccacctggtcactgatcgcatccgccggacagtcaagttcctgtgtgccctg
gggcggggaatccccattctgtccctggactggctgcatcagtcccgcaaggctggtttc
ttcttatcaccggatgaatatgtggtgaccgaccctgagcaagagaagaactttggcttt
agccttcaagacgcactgagccgggctcgggagcgaaggctgctagagggctatgagatc
tatgtgacccctggagtccagccaccaccacttcagatgggagagatcattagctgctgt
ggaggcacatacctacccagcatgcctcggtcctataagccacagagagttgtgatcaca
tgccctcaggacttccctcgttgctccattccactgcgggttgggctgcccctcctctcg
cctgagttcctgctgactggagtgctgaagcaggaagccaagccagaggcctttgtcctt
tcccctttggagatgtcatccacctga

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