Entry |
|
Symbol |
ALYREF
|
Name |
(RefSeq) THO complex subunit 4
|
KO |
|
Organism |
pon Pongo abelii (Sumatran orangutan)
|
Pathway |
pon05168 | Herpes simplex virus 1 infection |
|
Brite |
KEGG Orthology (KO) [BR:pon00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100450309 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
100450309 (ALYREF)
03015 mRNA surveillance pathway
100450309 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100450309 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100450309 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pon03019]
100450309 (ALYREF)
03041 Spliceosome [BR:pon03041]
100450309 (ALYREF)
Messenger RNA biogenesis [BR:pon03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100450309 (ALYREF)
TREX complex
100450309 (ALYREF)
Spliceosome [BR:pon03041]
Complex C
Other components
EJC/TREX
100450309 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100450309 (ALYREF)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
19:complement(97312133..97315913)
|
AA seq |
264 aa
MPDSAPAMADKMDMSLDDIIKLNRSQRGGRGGGRGRGRVGSQGGRGGGAQAAARVNRGGG
PIRNRPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG
RPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRGRGAGRN
SKQQLSAEELDAQLDAYNARMDTS |
NT seq |
795 nt +upstreamnt +downstreamnt
atgcccgattccgcgcccgccatggccgacaaaatggacatgtctctggacgacatcatt
aaactgaaccggagccagcgaggcggccggggcgggggccggggccgtggccgggtcggc
tcccagggcggccgcggcggtggggcgcaggccgccgcgcgggtgaatagaggcggcggg
cccatccggaaccggccggccatcgcccgcggcgcggccggcggaggcggcaggaaccga
ccggcgccctacagcaggcccaaacaacttcccgacaagtggcagcacgatcttttcgac
agtggcttcgggggtggtgccggcgtggagacgggtgggaaactgctggtgtccaatctg
gattttggagtctcagacgccgatattcaggaactctttgctgaatttggaacgctgaag
aaggcagctgtgcactatgatcgctctggccgcagcttaggaacagcagacgtgcacttt
gagcggaaggcagatgccctgaaggccatgaagcagtacaatggcgtccctctggatggc
cgccccatgaacattcagcttgtcacatcacagatcgatacacagcggagacctgcacag
agcgtaaacagaggtggcatgactagaaaccgtggcgctggaggttttggtggtggtgga
ggcacccggagaggcacccgtggaggcgcccgtggaagaggcagaggtgccggcaggaat
tcaaagcagcagctttcggcagaagagctggatgcccagctggacgcctataatgcgaga
atggacaccagttaa |