KEGG   Pongo abelii (Sumatran orangutan): 100450309
Entry
100450309         CDS       T01416                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03013  Nucleocytoplasmic transport
pon03015  mRNA surveillance pathway
pon03040  Spliceosome
pon05014  Amyotrophic lateral sclerosis
pon05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100450309 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100450309 (ALYREF)
   03015 mRNA surveillance pathway
    100450309 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100450309 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100450309 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pon03019]
    100450309 (ALYREF)
   03041 Spliceosome [BR:pon03041]
    100450309 (ALYREF)
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100450309 (ALYREF)
    TREX complex
     100450309 (ALYREF)
Spliceosome [BR:pon03041]
 Complex C
  Other components
   EJC/TREX
    100450309 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100450309 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 100450309
NCBI-ProteinID: XP_002828006
Ensembl: ENSPPYG00000008749
UniProt: H2NV29
LinkDB
Position
19:complement(97312133..97315913)
AA seq 264 aa
MPDSAPAMADKMDMSLDDIIKLNRSQRGGRGGGRGRGRVGSQGGRGGGAQAAARVNRGGG
PIRNRPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG
RPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRGRGAGRN
SKQQLSAEELDAQLDAYNARMDTS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgcccgattccgcgcccgccatggccgacaaaatggacatgtctctggacgacatcatt
aaactgaaccggagccagcgaggcggccggggcgggggccggggccgtggccgggtcggc
tcccagggcggccgcggcggtggggcgcaggccgccgcgcgggtgaatagaggcggcggg
cccatccggaaccggccggccatcgcccgcggcgcggccggcggaggcggcaggaaccga
ccggcgccctacagcaggcccaaacaacttcccgacaagtggcagcacgatcttttcgac
agtggcttcgggggtggtgccggcgtggagacgggtgggaaactgctggtgtccaatctg
gattttggagtctcagacgccgatattcaggaactctttgctgaatttggaacgctgaag
aaggcagctgtgcactatgatcgctctggccgcagcttaggaacagcagacgtgcacttt
gagcggaaggcagatgccctgaaggccatgaagcagtacaatggcgtccctctggatggc
cgccccatgaacattcagcttgtcacatcacagatcgatacacagcggagacctgcacag
agcgtaaacagaggtggcatgactagaaaccgtggcgctggaggttttggtggtggtgga
ggcacccggagaggcacccgtggaggcgcccgtggaagaggcagaggtgccggcaggaat
tcaaagcagcagctttcggcagaagagctggatgcccagctggacgcctataatgcgaga
atggacaccagttaa

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