Pongo abelii (Sumatran orangutan): 100451305
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Entry
100451305 CDS
T01416
Symbol
PTBP1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X2
KO
K13218
polypyrimidine tract-binding protein 1
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100451305 (PTBP1)
03041 Spliceosome [BR:
pon03041
]
100451305 (PTBP1)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100451305 (PTBP1)
Spliceosome [BR:
pon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100451305 (PTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
100451305
NCBI-ProteinID:
XP_024092405
Ensembl:
ENSPPYG00000009289
UniProt:
H2NWR1
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All DBs
Position
20:545033..560014
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AA seq
557 aa
AA seq
DB search
MDGIVPDIAVGTKRGSDELFSTCVTNGPFIMSSNSASAANGNDSKKFKGDSRSAGVPSRV
IHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPV
LRGQPIYIQFSNHKELKTDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQ
SPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS
LDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGAP
GIISASPYAGAGFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGA
GNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHL
NGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSA
TLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNH
DLGENHHLRVSFSKSTI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgtcccagatatagccgttggtacaaagcggggatctgacgagcttttc
tctacttgtgtcactaacggaccgtttatcatgagcagcaactcggcctctgcagcaaac
ggaaatgacagcaagaagttcaaaggtgacagcagaagcgccggcgtcccctctagagtg
atccacatccggaagctccccatcgacgtcacagaaggggaagtcatctccctggggctg
ccctttgggaaggtcaccaacctcctgatgctgaaggggaaaaaccaggccttcatcgag
atgaacacggaggaggctgccaacaccatggtcaactactacacctcggtgacacccgtg
ctgcgcggccagcccatctacatccagttctccaaccacaaggagctgaagaccgacagc
tcccccaaccaggcgcgggcccaggcggccctgcaggctgtgaactcggtccagtcgggg
aacctggccttggctgcctcggcggcggccgtggacgcagggatggcgatggcggggcag
agccccgtgctcaggatcatcgtggagaacctcttctaccctgtgaccctggatgtgctg
caccagattttctccaagtttggcacagtgttgaaaattatcaccttcaccaagaacaac
cagttccaggccctgctgcagtacgcggaccccgtgagcgcccagcacgccaagctgtcg
ctggacgggcagaacatctacaacgcctgctgcacgctgcgcatcgacttttccaagctc
accagcctcaacgtcaagtacaacaatgacaagagccgcgactacacgcgcccagacctg
ccctccggagacagccagccctcgctggaccagaccatggccgcggccttcggtgcacct
ggtataatctcagcctctccgtatgcaggagctggtttccctcccacctttgccattcct
caagctgcaggcctttccgttcccaacgtccatggagccctggcccccctggccatcccc
tcggcggcggcagcagctgcagcagcaggccggatcgccatcccgggcctggcgggggcg
ggaaattctgtattgctggtcagcaacctcaacccagagagagtcacaccccaaagcctc
tttattcttttcggcgtctacggcgacgtgcagcgcgtgaagatcctgttcaataagaag
gagaacgctctggtgcagatggcggacggcaaccaggcccagctggctatgagccacctg
aacgggcacaagctgcacgggaagcccatccgcatcacgctctcaaagcaccagaacgtg
cagctgccccgcgagggccaggaggaccagggcctgaccaaggactatggcaactcaccc
ctgcaccgcttcaagaagccgggctccaagaacttccagaacatattcccgccctcggcc
acactgcacctctccaacatcccgccctcagtctccgaggaggatctcaaggtcctgttt
tccagcaatgggggcgtcgtcaaaggattcaagttcttccagaaggaccgcaagatggcg
ctgatccagatgggctccgtggaggaggcggtccaggccctcattgacctgcacaaccac
gacctcggggagaaccaccacctgcgggtctccttctccaagtccaccatctag
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