Pongo abelii (Sumatran orangutan): 100451751
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Entry
100451751 CDS
T01416
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pon03009
]
100451751 (PDCD11)
Ribosome biogenesis [BR:
pon03009
]
Eukaryotic type
90S particles
Other 90S particles
100451751 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Spt6_S1
OB_RRP5_4th
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
Suf
OB_RRP5
TPR_14
TPR_19
ARM_TT21
UTP6_C
DUF2110
TPR_16
TPR_CcmH_CycH
DUF7017
ARM_TT21_5th
NRDE-2
PPR
TPR_2
Motif
Other DBs
NCBI-GeneID:
100451751
NCBI-ProteinID:
XP_024109322
Ensembl:
ENSPPYG00000002621
UniProt:
H2NBH5
LinkDB
All DBs
Position
8:110372724..110423325
Genome browser
AA seq
1872 aa
AA seq
DB search
MANLEESFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGSTKRKKNQKGPAKTKKLKIE
KRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT
KKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLS
AEALKPGMLLTGTISSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLN
CIVEKVKGNGGVVSLSIGHSEVSTAIATEEQSWNLNNLLPGLVVKAQVQKVTPFGLTLNF
LTFFTGVVDFMHLDPKKAGTYFSNQAVRACILCVHPRTRVVRLSLRPIFLQPGRPLTRLS
CQKLGAVLDDIPVQGFFKKAGATFRLKDGVLAYARLSHLSDSKNVFNPEAFKPGNTHKCR
IIDYSQMDELALLSLRTSIIEAQYLRYHDIEPGAVVKGTVLTIKSYGMLVKVGEQMRGLV
PPMHLADILIKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVITCYADAK
PGLQIHGFIIRVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCE
PSKERMLLSFKLSSDPEPKKEPAGHSQKKGKAINVGQLVDVKVLEKTKDGLEVAVLPHNI
RAFLPTSHLSDHVANGPLLHHWLQAGDILHRVLCLSQSEGHVLLCRKPALVSTVEGGQDP
KNFSEIHPGMLLTGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVV
AKVTNVDEEKQRMLLSLRLSDCGLGDLATTSLLLLSQCLEELQGVRSLMSNRDSVLIQTL
AEMTPGMFLDLVVQEVLEDGSVVFSGGPVPDLVLRASRYHRAGQEVESGQKKKVVILNVD
LLKLEVHVSLHQDLVNRKAKKLRKGSEHQAIVQHLEKSFAIASLVETGHLAAFSLTSHLN
DTFRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTRKDSETVDEDEEVD
PALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTT
KLKVGKMVTARVIGGRDMKTFKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPV
EKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVG
QALRATVVGPDSSKAFLCLSLIGPHKLEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSI
FHMSDSYSEMPLEDFVPQKVVRCYILSTADNVLTLSLRSSRTNPETKSKVEDPEINSIQD
IKEGQLLRGYIGSIQPHGVFFRLGPSVVGLARYSHVSQHSLSKKALYNKHLPEGKLLTAR
VLRLNHQKNLVELSFLPGDTGKPDVLSASLEGPLPKQEERKTEAGERDQKAEKKNQKRNE
KKNQKGQEEVDLPSKEKQQPQKPQAQKRGGRERRESGSEQERVSKKPKKAGLSEEDDSLV
DVYYREGKEEAEETNVLPKEKQTKPAEAPRLQLSSGFAWNARLDSLTPALPPLAESSDSE
EDEKPHQATQKKKSKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSSPNSS
ILWLQYMAFHLQAMEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTK
VFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRS
QAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWS
VYIDMTIKHGSQKDVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKAL
EYVEAKSSVLED
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacctggaagaaagcttcccccgaggaggtacaagaaagatccacaaaccagag
aaagctttccagcagtcagttgaacaagacaacttatttgatatttctactgaagaggga
tccaccaaaagaaaaaagaaccagaaggggccagcaaaaacaaaaaagttgaaaatcgaa
aagagagaaagcagcaagtccgcaagagagaagtttgaaatccttagtgttgagtccctg
tgtgagggaatgcggattttgggttgcgtgaaagaggtgaatgaactggaactggtgatt
agtctccccaatggcctccaggggtttgtgcaagtcactgaaatctgtgatgcctacacc
aaaaagctgaatgagcaggtgacacaagaacaacctctgaaggacctacttcacttgcct
gaacttttctcacctggaatgctggtaagatgtgtggtgagcagtctgggcatcacagac
aggggtaagaagagtgtcaagctgtctctgaaccccaaaaatgtcaacagagtgctgagt
gctgaggccctgaagcctggcatgctacttacaggtaccatatccagcctggaagaccat
ggctacctagtggacattggtgttgatgggaccagagcttttctgccactgctgaaagcc
caggagtacatcagacagaagaacaaaggtgctaaactaaaggtgggtcagtacctgaac
tgcatcgttgaaaaggtgaaaggcaacggaggagttgttagtctgtctattggtcactca
gaggtttctactgccattgctactgaagagcagagctggaaccttaataacttgctacca
ggactggtggtcaaagctcaggtacagaaggtgactccatttggccttacactaaacttc
ctcacattcttcacgggcgtggttgactttatgcacctggatcccaagaaagctggaaca
tatttctcaaatcaggcagtgagggcctgcatcctctgcgtccatcctcgaaccagagtt
gtgcgcctgagcctgcgccccatcttcctacaacctggacgtccactcacccgactctct
tgccagaaacttggagcagtgctggatgatattcctgtccagggttttttcaaaaaggct
ggggccacctttagactgaaggatggggttctggcctatgcccggctcagccatctctct
gattctaagaacgtcttcaatcctgaggccttcaagccagggaacactcacaagtgtaga
attattgattacagccaaatggatgaactggccttgctctctctacgaacgtctattatt
gaagctcagtaccttagatatcatgacatcgaacctggggcagtggtaaagggcacagtg
ctaaccataaagtcatatgggatgctggtgaaggtgggcgagcagatgaggggcctggta
cctcccatgcacctggctgacatcctgataaagaatccggagaagaagtaccacatcggg
gatgaggtcaagtgccgggttttgctttgtgaccctgaagccaagaagctgatgatgacc
ctgaaaaaaaccctgattgagtccaaactacctgtcattacctgctatgctgatgccaag
cctggtctgcagatacatggcttcatcatcagggtcaaggactatggctgcattgtgaag
ttctacaacaatgtgcagggactggtgcccaagcatgagctcagtaccgagtatatccct
gacccggagagagttttttacactggccaggtggtgaaggttgtcgtgttgaactgtgag
ccatccaaagagaggatgctcttatccttcaagctgtcgagtgatccagagccaaagaaa
gagcctgcaggacacagtcagaagaaaggaaaagccattaacgttgggcagttggtagat
gtgaaggttttagagaagaccaaagatgggctggaggtggctgtcctgccccacaacatc
cgtgctttcctccctacatctcatctgtcggaccacgttgccaacggcccattgttgcat
cattggctccaggcaggtgacatccttcaccgagtcctgtgtctgagccagagcgagggg
catgttcttctttgcaggaagccagccttggtctccacagtagaaggtggccaggatccc
aagaacttctcagaaatccatcctggaatgctgctcactggttttgtgaagagcatcaag
gactatggcgtgttcatccagttcccctcaggtcttagtggactggccccaaaagctatc
atgagtgacaaatttgtgacctccacaagtgaccactttgttgagggccagacagtagtg
gcaaaggtgaccaatgtggatgaggagaagcagcggatgctgctgtcactgcggctgtcg
gactgcggtctgggggacttggccaccaccagcctccttctcctgagtcagtgcctggag
gagctgcagggcgtgcgcagcctcatgagcaaccgagactctgtgttgatccagacgctg
gctgagatgaccccgggaatgtttcttgacctagtggtgcaggaggtgttggaagatggc
tctgtggtattcagtgggggtccagtgcctgacctggtcctgagagccagcagataccat
cgcgcagggcaggaggtggaatctgggcagaaaaagaaggttgtaatcttaaatgttgat
cttttgaagttggaagtgcacgtttcccttcaccaggacttggtgaatagaaaagctaaa
aagctgaggaaaggcagcgaacaccaggcgattgtgcagcacttggagaagtcctttgcc
atcgcctccttggtagagactggccacctggcagctttctccctgacctctcacctcaac
gacaccttccgctttgactcagagaaattgcaggtgggacagggtgtctccctaaccctc
aagaccacagaaccaggagtgactggccttcttttggctgtggaggggccggctgccaag
aggaccatgaggccgacccggaaggactctgagacagttgacgaggatgaagaagtggat
ccagctctgactgtagggaccataaagaagcacactctctccatcggggacatggtcaca
gggactgtcaagtccattaagcccacccatgtggttgtgactctggaagatggcatcatt
ggctgtatccatgcctcccacattctagatgatgttccagaaggcacctctcctactacc
aagctgaaggttgggaagatggtcactgcccgagtgattggcgggcgagacatgaagaca
ttcaagtatctcccaataagtcaccccagatttgttcgaaccatcccggagctgagtgtt
cggccaagtgagctggaggatggccacactgctcttaacactcactctgttagccctgtg
gagaagattaaacagtaccaggccggccagactgttacttgcttcttaaagaagtacaac
gtggtgaagaaatggcttgaggtggagattgccccagacatccgggggagaattccctta
ttgctcacttctctgagcttcaaggttctgaagcatccagataagaagttccgggttggc
caggccctgagggccaccgttgttggcccagattcctccaaggccttcttatgtctgtcc
ctcataggtcctcacaagcttgaggaaggggaagtggccatgggccgagtggtgaaggtg
actcccaatgaggggctgacagtctccttcccctttgggaagataggaacagtcagtata
tttcacatgagtgactcctactccgagatgcccctggaagacttcgtcccccagaaggtt
gtcagatgttacatcctgtccactgcagacaatgtattgactttgtcgctgcgatcatcc
agaacaaacccggagacgaaaagcaaagtagaagatccagagattaactccatccaggac
attaaggaagggcagcttctgaggggctacatagggtccatccagccacatggtgtgttc
tttcgccttggcccctccgttgtgggtttggctcggtactcccatgtctcccagcacagc
ctgtccaagaaagccctttataacaaacacctccccgaagggaagctgctaacagccagg
gtcctacgccttaaccaccagaagaacctggtagagctgtctttcctcccgggagacact
gggaagccggacgtgctttctgcttccctggaagggccacttccaaagcaagaggaaagg
aaaacagaggctggggagagagaccaaaaagcggaaaagaaaaatcagaaaaggaacgag
aagaagaaccagaaggggcaggaggaggtggacctgcccagcaaggagaagcaacagccc
cagaagccacaggcgcagaagcggggtgggcgggagcgccgggagtctgggagtgagcag
gaaagagtgagcaagaagccaaagaaagccggcctgtcagaggaggacgacagccttgtg
gacgtgtactatcgggagggaaaagaggaggcagaagagacgaatgtgctgcccaaggag
aagcaaaccaagccagcagaagcgccccggctgcagctatcttcaggcttcgcttggaat
gcgcgactagactctctgaccccggccttgcctcccctagcagagagctcagacagcgag
gaggatgagaagccacaccaagccacgcagaaaaagaaaagcaagaaagaaagggagttg
gagaagcagaaggcagagaaggaactgtcccgcattgaggaggcgctgatggatcctggg
cggcagccagagtccgcggatgattttgaccgactggtgctgagctcccccaacagctcc
attctgtggctgcagtacatggctttccacctgcaggccatggagatcgagaaggcccgt
gccgtggctgagagggcccttaagaccatctccttcagagaggagcaggagaagctgaac
gtgtgggtggctctgctgaacctggagaacatgtacggctctcaggagtccctgaccaag
gtctttgagcgagccgtgcagtacaatgagcctctcaaagtctttctccacctggctgat
atctacgccaagtcagagaaattccaggaagctggtgaactctacaacaggatgctgaag
cgtttccggcaggagaaagccgtgtggatcaaatacggcgccttccttctgcggaggagc
caggctgcggccagtcaccgcgtgctgcagcgagccctggagtgcctgcctagcaaggag
catgtggatgtcattgccaagtttgcccagcttgagtttcagctgggggacgcagagcgg
gccaaagccatttttgagaacacgctgagcacctacccgaagcgcacagatgtctggtcg
gtctatatcgacatgaccatcaagcacggcagccagaaggacgtccgggacatctttgag
cgggtcattcatctgagcttggcccccaagagaatgaagttcttcttcaagcgctatctg
gactacgagaagcagcatggcactgagaaggatgtgcaggcagtcaaggccaaggccctg
gagtatgtggaggccaagagctcagtgctagaggactag
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integrated database retrieval system
