Pongo abelii (Sumatran orangutan): 100452074
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Entry
100452074 CDS
T01416
Symbol
PCDHB12
Name
(RefSeq) protocadherin beta-12
KO
K16494
protocadherin beta
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pon04515
]
100452074 (PCDHB12)
Cell adhesion molecules [BR:
pon04515
]
Cadherins
Protocadherins
100452074 (PCDHB12)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Big_9
Motif
Other DBs
NCBI-GeneID:
100452074
NCBI-ProteinID:
XP_002816043
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Position
4:149567144..149576555
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AA seq
795 aa
AA seq
DB search
MENGGAGTLQIRQVLLFFVFLRMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELS
SRGARVVSNDNKECLQLDTNTGDLLLSEMLDREELCGSNEPCVLYFQVLMKNPTQFLQIE
LHVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHV
KIRVNPDNRKYPELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDSNDNSP
EFEQAFYEVKILENSILGSLVVTVSAWDLDSGTNSELSYAFSHASEDIRRTFEINQKSGD
ITLTAPLDFEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENT
PETVVMVFRIRDRDFGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRALYNIT
ITVTDLGTPRLKTEHNITVLVSDINDNAPAFTQTSYALFVRENNSPALHIGSISATDRDS
GTNAQVTYSLLRSQDPHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFSVWVHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSREA
AVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCVTGGSRSNEFKFLKPIIPNFLPQSTG
REVEENPPFQNNLGF
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacggaggggcaggcactctgcagataaggcaagtcctgcttttctttgttttc
ctgagaatgtctcaggcgggctctgaaactgggaactttttggtgatggaggaattgcag
agcgggagctttgtaggaaatttggcaaagaccctgggactggaggtgagtgagctgtct
tcgcggggggctcgggtggtttctaatgataacaaagagtgtttgcagctggacacaaac
actggggatttgctcctgagcgaaatgctagacagggaggagctctgtggctccaatgag
ccttgtgtgctgtatttccaagtgttaatgaaaaaccccacgcaatttttacaaattgag
ctccacgtcagggatataaatgatcactctcccgtcttcttggaaaaagaaatgctctta
gaaatcccagagaacagtcctgttggtgctgtgttcttactagaaagtgcaaaggattta
gatgtgggaatcaatgctgtaaaaagctacacaataagccccaactctcatttccacgtt
aaaataagagtcaatccagacaataggaaataccctgagttagttctggacaaggcgctg
gattatgaagagcgcccggagctcagtttcatcctcactgctctggatggcgggtcccct
cccaggtctggaactgccttggtcagggtggtggttgtagatagtaatgacaactcccct
gagtttgagcaggctttttatgaggtgaagattctggagaatagcatccttggctccctg
gttgtgaccgtctcagcctgggatttagactctggaacaaacagtgaactatcctatgcc
ttttcccatgcttcagaagatattcgcaggacatttgaaattaatcaaaagtctggagac
attactttaacagcacctttggattttgaagcaattgagtcatactcaataatcattcaa
gccacagatgggggaggactttttggaaaatctacagtcagaattcaggtgatggatgta
aatgacaatgctcctgaaatcactgtgtcatcaattaccagtccaatcccagaaaacact
ccagagactgtggttatggttttcaggatacgagacagagactttggggacaatggaaag
atggtttgttctatcccagaagacatcccattcgtgctaaaatcttcggtaaataattac
tacactttggaaacagagagaccactggacagagagagcagagccttgtacaacatcacc
atcaccgtcaccgacttggggacccccaggctaaaaaccgagcacaacataaccgtcctg
gtctccgacatcaatgacaacgcccccgccttcacccaaacttcctacgccctgttcgtc
cgtgagaacaacagccccgccctgcacatcggcagcatcagcgccacagacagagactca
ggcaccaacgcccaggtcacctactcgctgctgcggtcccaggacccgcacctgcccctc
gcctccctggtctccatcaacgcagacaacggccatctattcgccctcaggtctctggac
tacgaggccctgcaggagttcgagttccgcgtgggcgccacagaccgcggctccccggcg
ctgagcagcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctccgcgccctgcaccgagctggtgccccgggcggcc
gagccgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggttgtcgtaccagctgctcaaggccacggagcccgggctgttcagcgtgtgggtgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaagcacaggctg
gtggtgctggtcaaggacaatggcgagcctccgcgctcggccaccgccacgctgcaagtg
ctcctggtggacggcttctcccagccctacctgcctctcccggaggcggccccggcccag
gcccaggccgactcgctcaccgtctacctggtggtggcgttggcctcggtgtcgtcgctc
ttcctcttttcggtgctcctgttcgtggcggtgcggctgtgcaggaggagcagggaggcc
gcagtcggtcgctgctcggtgcccgagggcccctttccaggacatctggtggacgtgagc
ggcaccgggaccctgtcccagagctaccagtatgaggtgtgtgtgactggaggctccagg
tcaaatgagttcaaatttctgaaaccaattatccccaacttcctaccccagagcacaggt
agggaagtcgaagaaaatcccccatttcagaataatttgggtttctga
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