Entry |
|
Symbol |
PCDHB11
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Name |
(RefSeq) protocadherin beta-11
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KO |
|
Organism |
pon Pongo abelii (Sumatran orangutan)
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Brite |
KEGG Orthology (KO) [BR:pon00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:pon04515]
100452694 (PCDHB11)
Cell adhesion molecules [BR:pon04515]
Cadherins
Protocadherins
100452694 (PCDHB11)
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
4:149558955..149566855
|
AA seq |
797 aa
MENGRACTQQIRQVLLLFVLLGMTQAGSETWRFSVAEEMQSGSFVGNLAKDLGLKVRELS
SRGAQVVSNDKKQRLQLDINTADLLLSETLDREELCGFIEPCVLHFQVLMQNPTQFLQIQ
LQVRDINDHSPIFLEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI
KMRVNPDNRKYPELVLDKALDYEERPELSFVLTALDGGSPPRSGTALVKVVVVDTNDNSP
EFEQAFYEVKFPENSILGSLVLTVSARDLDSGTNGEICYTLSHASEDIRKTFEINQKSGE
ITLTAPLDFETIESYSIIIQATDGGGLFGKSTVRIQVIDVNDNAPEITVSSITSPIPENT
PETVVMIFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT
ITATDLGIPRLKTEYNTTVLVSDVNDNSPTFTQTSYTLFVRENNSPALHIGSVSATDRDS
GTNAQVNYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPA
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFSVWAHNGEVRIARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV
LLVDGFSQPYLPLPEAAPAHAQADSITISLVVALASVSSLFLFSVLLFVVVRLCRRSRAA
SVGRFSVPEGPFPGHLVDMSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPVVPNIQAEGLG
KNSEENPTFRNSFGFNF |
NT seq |
2394 nt +upstreamnt +downstreamnt
atggagaacggaagggcatgcactcagcagataaggcaagtcctgcttctctttgttttg
ctgggaatgactcaggcgggctctgaaacctggagattttccgtggcagaggaaatgcag
agcgggagttttgtaggcaatctggcaaaggacctggggctgaaggtgagagaactgtcc
tcacggggggctcaggtggtctctaatgataagaaacagcgtttgcagctggacatcaac
acggcggatttgctcttaagtgaaacactagacagggaggagctctgcggtttcatcgag
ccttgcgtgctacatttccaggtgttaatgcaaaaccccacgcagtttttacaaattcag
cttcaggtcagggatataaatgatcactctcccatcttcttggaaaaacaaatgctccta
gaaatcccagaaaacagtcctgttggtgctgtgttcttactagaaagtgcgaaggattta
gatgtaggaatcaatgctgtaaaaagctacacaataagccccaactctcattttcacatt
aaaatgagagtcaatccagacaacaggaaataccccgagttagttctggacaaggcgctg
gattatgaagagcgcccggagctcagtttcgtcctcactgctctggatggcgggtcccct
cccaggtctggaactgccttggtcaaagtggtggttgtggacactaatgacaactcccct
gaatttgagcaagctttttatgaggtgaagtttccggagaatagcatccttggctcgctg
gttttgacggtctcagctagggatttagactctggaacaaatggtgaaatatgctatacc
ttatcccatgcctcagaagatattcgcaagacatttgaaattaatcaaaagtctggagaa
attactttaacagcacctctggattttgaaacgattgagtcgtactcaataatcattcaa
gccacagatgggggaggactttttggaaaatctacagtcagaattcaggtgatagatgta
aatgacaatgctcctgaaatcactgtgtcatcgattaccagtccaatcccagaaaatacg
ccagagactgtggttatgatttttagtatccaagatatagactctggggacaacggaaga
attgtttgttccattccggaagacctcccattcgtgctaaaatcttcagttgagaattac
tacacgttggaaacagagagaccactggacagagagagcacagccgaatacaatatcacc
atcaccgccactgacttggggatacccaggctgaaaaccgagtacaacacaactgtgttg
gtctccgacgtcaatgacaactcccccaccttcacccaaacctcctacaccctgttcgtc
cgcgagaacaacagccccgccctgcacatcggcagtgtcagcgccacagacagagactca
ggcaccaacgcccaggtcaactactcgctactcccgccccaggacccgcacctgcccctc
gcctccctcgtctccatcaacgcagacaacggccacctgtttgccctcaggtcactggac
tacgaggccctgcaggcgttcgagttccgcgtgggcgcctcagaccgcggttccccggcg
ctgagcagcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctccgcgccttgcaccgagctggtgccccgggcggcc
gagccgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggttgtcgtaccagctgctcaaggccacggagcccgggctgttcagtgtgtgggcgcac
aatggcgaggtgcgcatcgccaggctgctgagcgagcgcgacgcggccaagcacaggctg
gtggtgctggtcaaggacaatggcgagcctccgcgctcggccaccgccacgctgcaagtg
ctcctggtggacggcttctctcagccctacctgcctctcccggaggcggccccggcccac
gcccaggccgactcgatcaccatctccttggtggtggcgttggcctcggtgtcgtcgctc
ttcctcttctcggtgctcctgttcgtggtggtgcggttgtgcaggaggagcagggcggcc
tcagtgggccgcttctcggtgcccgaaggcccctttccagggcatctggtggacatgagc
ggcaccgggaccctatcccagagctaccagtacgaggtgtgtctgacgggaggttccggg
accaatgaattcaagttcctaaaaccggttgtccctaatatccaggcagaaggtcttggg
aagaatagtgaagaaaaccccacctttcgaaatagcttcggatttaatttttag |