Pongo abelii (Sumatran orangutan): 100453062
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Entry
100453062 CDS
T01416
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-16
KO
K16494
protocadherin beta
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pon04515
]
100453062
Cell adhesion molecules [BR:
pon04515
]
Cadherins
Protocadherins
100453062
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
100453062
NCBI-ProteinID:
XP_003780468
LinkDB
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Position
4:149544371..149547604
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AA seq
774 aa
AA seq
DB search
MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSAVEETERGSFVANLGKDLGLGLTEMS
TRKARIISQGNKQHLHLKVQTGDLLINEKLDREELCGPTEPCILHFQVLMEKPLEIFQAE
LRVIDINDHSPMFTEKEMILKIPENSPLGTQYPLYHALDLDVGSNNVQNYKISPNSHFGV
LTRERNDGRKYPELVLGKELDREEEPQLRLTLTALDGGSPPRSGAAQVSIEVVDISDNAP
EFEQPIYKVQIPENNPLGSLVATVSARDLDSGANGKISYTLFQPSEDISKTLEVNPMTGE
IRLRKQVDFEPVTSYEVDIKATDGGGLSGKCTLLLQVVDVNDNLPQVTMSALTSPIPENS
PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT
LTITDTGTPRLKTEHNITVQISDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS
GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGXPA
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAXDSGQKAWL
SYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLYVLL
VDGFSQPYLPLPEAAPAQAQADSLTVYLVVALSSVSSLFLFSVLLFVAVRLXRRSRAASV
GRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETREFKLLKPIIPNFSP
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagattggatggatgcacaatcggagacaaaggcaagtcctcgttttctttgttttg
ctgagcttgtctggggcgggcgccgagttggggtcctattccgcagtggaagaaacggag
agaggctcttttgtggcaaatctaggaaaagacctggggttggggttgacagagatgtcc
acccgcaaggccaggatcatttcccaggggaacaaacagcatttgcacctcaaggttcaa
actggggatttgctcataaatgagaagctagatcgagaggagctatgcggtcccactgag
ccttgcatactacatttccaagtgttaatggaaaaacctttagaaatatttcaggctgaa
ctgagggtgatagatataaatgaccattctcccatgttcactgaaaaggaaatgattcta
aaaataccggaaaacagtcctctaggaactcagtacccactgtatcatgctttggacttg
gatgtaggaagcaataatgttcaaaactataaaatcagcccaaattcccattttggggtt
ctaaccagagaacgcaatgatggcaggaaataccctgagctagtgttgggtaaagagctg
gatcgggaggaggagcctcaactaagactaaccctgacagcactggatggcggctctcca
ccacgatctggagctgctcaggtcagcattgaagtggtggacatcagtgataacgctcct
gagtttgagcagcccatctacaaagtgcagattccagagaacaacccccttggctccctg
gttgccaccgtctccgccagggatttagacagcggagccaatggaaaaatatcatacaca
ctctttcagccttcggaggatattagtaaaactttggaggtaaatcctatgacaggggaa
attcgactgagaaaacaagtagatttcgaaccggttacgtcttatgaagtggacatcaaa
gccacagatgggggaggtctttcaggaaagtgcactcttctcctgcaagtggtggatgtg
aatgacaatctcccacaggtgaccatgtctgcactcaccagccccatcccagagaactcg
cctgagatagtagttgctgttttcagcgtttcagatcctgactccggaaacaatgggaag
acgatttcctccatccaggaagaccttccctttcttctaaaaccttcagtcaagaacttt
tacaccttggtaacggagagagcactcgacagagaagcaagagctgaatataatatcacc
ctcaccatcacagatacggggactccaaggctgaaaacggagcacaacataacagtgcag
atatcagatgtcaatgataacgcccccgctttcacccaaacctcctacaccctgttcgtc
cgcgagaacaacagccccgccctgcacatcggcagtgtcagcgccacagacagagactca
ggcaccaacgcccaggtcacctactcgctgctgccgccccaggacccgcacctgcccctc
gcctccctcgtctccatcaacgcagacaacggccacctgttcgccctcaggtctctggac
tacgaggccctgcaggctttcgagttccgcgtgggcgccacagaccgcggcntccccgcg
ctgagcagcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctccgcgccctgcaccgagctggtgccccgggcggcc
gagccgggctacctggtgaccaaggtggtggcgnncgactcgggccagaaagcctggctg
tcgtaccagctgctcaaggccacagagcccgggctattcggcgtgtgggcgcacaatggc
gaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaagcacagactggtggtg
ctggtcaaggacaatggggagcctccgcgctcggccaccgccacgctgtacgtgctcctg
gtggacggcttctctcagccctacctgcctctccctgaggcggccccggcccaggcccag
gccgactctctcactgtctacctggtggtggcgttgtcctcggtgtcttcactcttcctc
ttctcggtgctcctgttcgtggcggtgcggctgtgaaggaggagcagggcggcctcagtg
ggccgctgctcggtgcccgagggtccctttccagggcatctggtggacgtgagcggcacc
gggaccctgtcccagagctaccaatacgaagtgtgtctgacaggaggctcagaaacaagg
gagttcaagctcctgaagccgattatccccaacttctctccttag
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