Pongo abelii (Sumatran orangutan): 100453854
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Entry
100453854 CDS
T01416
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03082
ATP-dependent chromatin remodeling
pon04714
Thermogenesis
pon05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100453854 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100453854 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100453854 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100453854 (SMARCD1)
03036 Chromosome and associated proteins [BR:
pon03036
]
100453854 (SMARCD1)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100453854 (SMARCD1)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100453854 (SMARCD1)
PBAF complex
100453854 (SMARCD1)
GBAF(ncBAF) complex
100453854 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
100453854
NCBI-ProteinID:
XP_002823254
Ensembl:
ENSPPYG00000004505
LinkDB
All DBs
Position
12:47659133..47674852
Genome browser
AA seq
644 aa
AA seq
DB search
MPCAKMKLLLQAPLHQRSRVGVETGAEAVVRPPFQVLVFLPSAWGRPLTGPLYRRALLYG
FPSRTVKAGGRGQHAFSASRPALAHSLAALSLPCRPAGRGNRRALGGRSGGGGSSGSGSL
CSCIGGSGKMAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRS
PMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQV
QQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEA
LKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR
KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQ
PPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQR
MKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLST
ASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVG
NPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgccatgcgccaagatgaagctattactccaagcccctcttcatcagaggtctcgagtc
ggggttgagactggggctgaggctgtggtccgtccccctttccaggtccttgtcttcctc
ccgtcggcctgggggcgcccgctcacagggcctctctatcgcagagctcttctctatggt
tttccctcccggaccgtgaaggcgggagggcgtggccagcacgccttttccgctagtcgc
cccgctctagcccatagtctcgctgccctgagcctcccgtgccggccggccggccggggg
aacaggcgggcgctcggggggcgctcggggggcggggggagttccggttccggttctttg
tgcagctgcatcggcggctccgggaagatggcggcccgggcgggtttccagtctgtggct
ccgagcggcggcgccggagcctcaggaggggcgggcgcggctgctgccttgggcccgggc
ggaactccggggcctcctgtgcgaatgggcccggctccgggtcaagggctgtaccgctcc
ccgatgcccggagcggcctatccgagaccaggtatgttgccaggcagccgaatgacacct
cagggaccttccatgggaccccctggctatggggggaacccttcagtccgacctggcctg
gcccagtcagggatggatcagtcccgcaagagacctgcccctcagcagatccagcaggtc
cagcagcaggcggtccaaaatcgaaaccacaatgcaaagaaaaagaagatggctgacaaa
attctacctcaaaggattcgtgaactggtaccagaatcccaggcctatatggatctcttg
gcttttgaaaggaaactggaccagactatcatgaggaaacggctagatatccaagaggcc
ttgaaacgtcccatcaagcaaaaacggaagctgcgaattttcatttctaacactttcaat
ccggctaagtcagatgccgaggatggggaagggacggtggcttcctgggagcttcgggta
gaaggacggctcctggaggattcagccttgtccaaatatgatgccactaaacaaaagagg
aagttctcttccttttttaagtccttggtgattgaactggacaaagacctgtatgggcca
gacaaccatctggtagaatggcacaggaccgccactacccaggagaccgatggctttcag
gtgaagcggccgggagacgtgaatgtacggtgtactgtcctactgatgctggattaccag
cctccccagtttaaattagacccccgcctagctcgactcctgggcatccatacccagact
cgtccagtgatcatccaagcactgtggcaatatattaagacacataagctccaggaccct
catgagcgggagtttgtcatctgtgacaagtacctgcagcagatctttgagtctcaacgt
atgaagttttcagagatccctcagcggctccatgccttgcttatgccaccagaacctatc
atcattaatcatgtcatcagtgttgacccgaatgatcagaaaaagacagcttgttatgac
attgatgttgaagtggatgacaccttgaagacccagatgaattcttttctgctgtccact
gccagccaacaggagattgctactctagacaacaagatccatgagacaatagaaaccatc
aaccagctgaagactcagcgggagttcatgttgagctttgccagagaccctcagggtttc
atcaatgactggcttcagtcccagtgcagggacctcaagacaatgactgatgtggtgggt
aacccagaggaggagcgccgagctgagttctacttccagccctgggctcaggaggctgtg
tgccgatacttctactccaaagtgcagcagagacgacaagaattagagcaagccctggga
atccggaatacatag
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integrated database retrieval system
