Pongo abelii (Sumatran orangutan): 100454019
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Entry
100454019 CDS
T01416
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pon03036
]
100454019 (SMARCAL1)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100454019 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
Flavi_DEAD
ERCC3_RAD25_C
DUF6615
Motif
Other DBs
NCBI-GeneID:
100454019
NCBI-ProteinID:
XP_002812876
Ensembl:
ENSPPYG00000013155
UniProt:
A0A2J8STV1
LinkDB
All DBs
Position
11:119813627..119884053
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AA seq
954 aa
AA seq
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MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQRTSSGTSIAGNPFQAKQGPSQNFPRE
SCKPVSHGVIFKQQNLSSSSNADQRPHDSHSFQAKGIWKKPEEMPTACPGHHPRSQMALT
GISPPLAQSPPEVPKQQLLSYELGHGHAQASPEIRFTPFANPTHEPLAKAKSSQETPAHS
SGQPPRDAKLEAKTAKASTSGQNISYIHSSSESVTPRTEGRLQQKSGSSVQKGVNSQKGK
CIRNGDRFQVLIGYNAELIAVFKSLPSKNYDPDTKTWNFSMNDYSALMKAAQSLPTVNLQ
PLEWAYGISESPSTSSEGQAGLPSAPSLSFVKGRCMLISRAYFEADISYSQDLIALFKQM
DSRRYDVKTRKWSFLLEEHNKLIAKVRCLPQVQLDPLPTTLTLAFASQLKKTSLSLTPDV
PEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFYRKEWP
LLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKDRLTAGLINIVSFDLLSKLEKQLK
TPFKVVIIDESHFLKNSRTARCRAAMPVLKVAKRVILLSGTPAMSRPAELYTQIIAVKPT
FFPQFHAFGLRYCDAKRMPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLPAKQRK
IVVIAPGRINARTRAALDAAAKEMTTKDKTKQQQKDALILFFNRTAEAKIPSVIEYILDL
LESGREKFLVFAHHKVVLDAITQELGRKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVA
VLSITAANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADD
YLWPLIQEKIKVLAEAGLSETNFSEMTESTDYLYQDPKQQKIYDLFQKSFEKEGSDMELL
EAAESFDPGSASGTSGSSSQNMGDTLDESSLTASPQKKRRFEFFDNWDSFTSPL
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcctcttacagaggagcagaggaaaaagattgaagagaatcgacaaaaggct
ctggcccgcagagctgagaagttattggcagaacagcatcagaggactagctcgggcacc
tccattgctggcaacccattccaggccaagcaaggcccatcccaaaatttcccaagggag
tcttgtaagccagtgagccatggtgtcattttcaaacaacagaatctcagtagctcatct
aatgctgaccaaagacctcatgattcccacagttttcaggcaaagggaatatggaaaaag
ccagaagaaatgcccacagcctgcccaggccaccatccacgtagtcaaatggctctcact
ggaatctctcctcccttggcacaaagtcctccagaggtccctaaacaacagctcttgagt
tatgagttaggccacggtcatgctcaggcttcacctgagatcaggttcacaccctttgct
aacccaactcatgagcctctggccaaagcaaagagttcccaagagacaccagctcattcc
tctggacagcctcccagggatgctaagttagaggccaagacagcaaaagcctccacctcg
gggcagaacatttcttatatccattctagctcagagagtgtaacgcccaggacagaagga
agactccaacagaagtcagggtcctcagtccaaaaaggagtgaactctcagaagggaaag
tgcataaggaacggcgatcgtttccaggtgttgattgggtacaatgcggaactcattgca
gtgtttaagagcctgcccagcaagaattatgatcctgacaccaagacgtggaacttcagc
atgaatgactatagtgccctgatgaaagcagcccagagcctccccacggtcaacctgcag
cctctggaatgggcctatggcatcagcgagtcaccctccaccagcagtgagggacaggcc
ggccttccatcagctccatccctttcgtttgtcaaagggcgatgcatgctcatctccagg
gcctacttcgaggcagacatcagttattcacaggacctgattgcactttttaaacagatg
gattccagaagatatgatgtcaagaccaggaagtggagctttctcttggaagagcacaat
aaactaattgcaaaggtgcgctgcctcccacaagttcagctggaccctctgcccacgact
ctcacgctggcgtttgcttctcagctcaagaagacatctctcagtctcactccagatgtc
ccagaggcagacctttctgaagtggaccccaagctcgtgtctaatctgatgccctttcag
agagctggagtcaattttgccatagccaaaggaggccgcctgctgctcgctgacgacatg
ggcctggggaagaccatccaagccatctgcatcgcagccttttaccggaaggagtggccg
ctcctggtggtggtgccatcctccgtgcgcttcacctgggagcaggctttccttcggtgg
ctgccatctctgagcccagattgcatcaacgtcgtggtgactgggaaggaccgcctgaca
gctggcctgatcaacattgtcagctttgaccttcttagcaagttggaaaaacagctaaaa
accccttttaaagttgtcatcattgatgaatctcacttcctcaaaaacagtaggactgcc
cgctgtcgagcagctatgccggtcctaaaggttgccaagagggtgatcctgttgtcgggt
acaccagccatgtcccggcccgcagagctctacacgcagatcatcgcagtcaagccaact
ttcttcccccagtttcatgcctttggacttcgctactgtgatgccaagcggatgccttgg
gggtgggactactcaggttcctccaacctgggagagctgaagctcctgctggaggaagcg
gtcatgctgcggcgcctcaagtcagacgtcctttcccagctgcctgccaagcagcgcaag
atagtggtgattgccccaggacggatcaatgccaggaccagagctgccctggatgctgca
gccaaggaaatgaccaccaaggacaaaactaaacagcagcagaaagacgccctcattctc
ttcttcaacagaacagctgaagctaaaatcccatctgtcattgaatatatcttggaccta
ctggaaagtggaagagagaagtttttagtgtttgcacaccataaggtggtcctggacgca
attacgcaagagcttgggagaaagcacgtgcagcacatccgcatcgatggctccacctca
tcagctgagcgggaggacctgtgccagcagttccaactgtcagagaggcatgccgtggct
gtgctgtccatcaccgctgccaatatgggcctcaccttctcctcggctgacctggtggtg
tttgctgagctgttttggaacccaggggtgctgatccaggctgaggaccgcgtgcaccgc
attggacagaccagctccgtgggcattcactacctcgtggcaaagggcacagctgatgac
tacctttggcccctgattcaagagaagattaaagttctggcggaagccgggctttctgag
accaatttttcagaaatgacagaatccactgattacctctaccaggacccaaagcagcag
aagatctatgacctattccagaagtcctttgagaaagaaggaagtgatatggagctcctg
gaagcagcagagtcctttgacccaggaagtgcttcaggaacatctggaagtagttcccag
aacatgggagacaccctggatgaaagctcattgacagccagtccacagaagaaaaggaga
tttgaattttttgataactgggacagctttacctctcccctgtaa
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