Pongo abelii (Sumatran orangutan): 100454124
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Entry
100454124 CDS
T01416
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X15
KO
K23625
ataxin 2/2L
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon05014
Amyotrophic lateral sclerosis
pon05017
Spinocerebellar ataxia
pon05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100454124 (ATXN2L)
05017 Spinocerebellar ataxia
100454124 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
100454124 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100454124 (ATXN2L)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100454124 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
100454124
NCBI-ProteinID:
XP_002826320
Ensembl:
ENSPPYG00000025917
UniProt:
A0A2J8TJP4
LinkDB
All DBs
Position
18:complement(31679079..31693909)
Genome browser
AA seq
1043 aa
AA seq
DB search
MLKPQPPQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPTAASPCLG
PVAAAGSGLRRGAEGILAPQPPPPQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNNS
RMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVD
TMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDY
DLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAR
EIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGPR
GGVRCSSSRGGRPGLSSLPPRGPHHLDNNSPGPGSEARGINGGPSRMSPKAQRPLRGAKT
LSSPSNRPSGETSVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSSASIPVT
SSVSDPGVGSISPASPKISLAPTDVKELSTKEPGRTLEPQELARIAGKVPGLQNEQKRFQ
LEELRKFGAQFKLQPSSSPENSLDPFPPRILKEEPKGKEKEVDVLLTSEPMGSPVSSKTE
SVSDKEDKPPLASAGGTEGPEQPPPPCPSQTGSPPVGLIKGEDKDEGPVAEQVKKSTLNP
NAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMGP
AVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVAA
TPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQ
YPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQA
PHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHHQQLPHGFTNMA
HVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSPY
PYIGHPQAPLPPPGELKIVLAAT
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagccctcccagccccagcagccgccccccacgcaa
caggccgtggcccgtcggccccccgggggcaccagccctcccaacggcggcctcccgggg
ccgctggccacctctgcggctcctcccgggcctccaacggccgcctccccctgcctgggg
cctgtggccgctgccgggagcgggctccgccggggagccgaaggcatcttggcgccgcag
ccgccgccgccgcagcaccaggagaggccgggggccgcagccatcggcagcgccagggga
cagagcacaggaaagggacccccacagtcacctgtgtttgaaggcgtctacaacaattcc
agaatgctgcatttccttacagctgttgtgggctccacttgtgatgtaaaggtgaaaaat
ggtaccacttatgagggtatcttcaagacgctaagctcaaagtttgaactagccgtggat
gctgtgcaccggaaagcatctgagccagcaggtggccctcgtcgggaagacattgtggac
accatggtgtttaagccaagtgatgtcatgcttgttcacttccgaaatgttgacttcaat
tacgctactaaagacaagttcaccgattcagccattgccatgaactcaaaagtgaatggg
gaacacaaagagaaggtgcttcagcgctgggaggggggtgacagcaacagcgacgactat
gacctcgagtctgacatgtccaatggatgggaccccaatgaaatgttcaagttcaatgag
gagaactacggtgtgaagactacctatgatagcagtctttcttcttatacggtgccctta
gaaaaggacaactcagaagagtttcgtcagcgagagctgcgtgcggcccagttggctcga
gagattgaatcaagcccccagtaccgcctgcggatcgccatggagaacgacgatgggcgc
actgaagaggagaagcacagtgcagtccagcggcagggctcagggcgagagagccccagc
ttggcatccagggaggggaagtatatccctctgcctcaacgagtccgggaaggtccccgg
ggaggagttcgatgcagcagctctcggggtggtcggcctggccttagctctttgccacct
cgtggccctcaccatctggacaataacagccctggcccaggttctgaggcccgtggtatc
aatggaggtccttcccgcatgtccccaaaggcacagcggcctctgagaggtgccaagact
ctgtcttcgcccagtaataggccttctggagaaacttctgttccacctcctcctgcagtg
ggccggatgtatcccccgcgttctcccaagtctgctgcccctgccccaatctcagcttcc
tgtcctgagcctcccatcggctcggcagtgccaacctcttcagcctccatccctgtgacc
tcatcagtctcagatcctggagtgggctccatttccccagcttctccaaagatctccctg
gcccccacagatgtaaaagaactctctaccaaggaacctggaagaactctggagccccag
gagctggctcggatagctgggaaagtccccggtcttcagaatgaacagaaacgattccaa
ctggaagaactgagaaagtttggggcccagtttaagcttcagcccagtagctcccctgag
aacagcctggatccttttcctccccggatcttaaaggaggagcccaaaggaaaggagaag
gaggttgatgttctgttgacttcagagcccatggggtctcctgtctcctccaagacagag
tccgtatcggataaagaggacaaaccacccctggcatcagcaggaggcactgaggggcca
gagcagcccccaccaccttgcccaagccaaactggcagccccccagtgggcctcatcaag
ggagaagacaaagatgagggccctgttgctgaacaagtaaagaaatcaacgttgaaccct
aatgctaaggagttcaatcctacaaagcctctgctgtctgtgaataaatccaccagtacc
ccaacttctccggggccccggactcattcaactccctccatcccggtgctgacagcaggc
cagagtgggctatacagcccccagtacatctcatacatacctcagatccacatgggacca
gctgtgcaggcacctcaaatgtatccatatcctgtatccaattcagtgcctgggcagcag
ggcaagtaccggggagcaaaaggctccctgcctccgcagcgctcggaccaacaccagcca
gcctcagccccgccaatgatgcaggccgccgcggctgctggcccgcctctggtggctgcc
acgccctattcttcctacatcccctacaaccctcagcagttcccaggccagccggccatg
atgcagcccatggcccactacccctcacagccggtgtttgcccccatgcttcagagcaac
ccacgcatgctgacatcgggcagccatccccaggccattgtgtcatcctctacccctcag
tacccttctgcagagcagcccaccccccaggccctttatgccactgttcaccagtcctac
ccacaccatgccacgcagctccatgcccaccagccgcagccagctaccacacctactgga
agccagccgcagtcccagcatgcggcccccagtcctgtccagcatcaggcggggcaggcc
ccacacttgggcagtggacagccacagcagaatctgtaccacccaggggccctgacaggc
acgccgccctctctgccaccgggaccttctgcccagtcccctcagagcagcttcccccag
ccagccgctgtgtatgccatccaccaccagcagctgccccacggcttcaccaatatggcc
catgttacccaggcccatgtccaaactggaatcacagcagccccgccccctcaccctggg
gctccccacccgccccaggtgatgctgctgcacccaccccagagtcatggggggcccccc
caaggcgcggtgccccagagtggggtgcctgcactctcagcttccacaccctcaccctac
ccctacatcggacacccccaagctccccttccaccccccggggaactgaagattgtcctg
gccgcgacctga
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