Pongo abelii (Sumatran orangutan): 100454273
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Entry
100454273 CDS
T01416
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X2
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100454273 (MED16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100454273 (MED16)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
100454273 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_THOC3
Beta-prop_WDR35_TULP_N
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_HPS5
DSE1_N
Beta-prop_RIG_2nd
Beta-prop_EML
CDC45
Beta-prop_EML_2
ASA1
Motif
Other DBs
NCBI-GeneID:
100454273
NCBI-ProteinID:
XP_024092651
Ensembl:
ENSPPYG00000009296
LinkDB
All DBs
Position
20:complement(620022..642644)
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AA seq
841 aa
AA seq
DB search
MCDLRRPAAGGMMDLAYVCEWEKWSKSTHCPSVPLACAWSCRNLIAFTMDLRSDDQDLTR
RIHILDTEHPWDLHSIPSEHREAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWES
SVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWI
AVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQ
FYKVCVSVVSEKCRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASS
QTSSIVECWSLRKEGLPVNNIFQQISPVVGDKQPTILKWRILSATNDLDRVSAVALPKLP
ISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAVFYSSAAPRPVDEPAIK
RPRTAGPAVHFKAMQLSWTSLALVGIDNQSKLSMLRLSPSMGHPLEVGLALRHLLFLLEY
CMVTGYDWWDILLHVQPNMVQSLVEKLHEEYTRQTAALQQVLSTRILAMKASLCKLSPCT
VTRVCDYHTKLFLIAISSTLKSLLRPHFLNTPDKSPGDRLTEICAKITDVDIDKVMINLK
TEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSLLRPGHSFLRDGTSLGMLRELMV
VIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPASEPDEALVDECCLL
PSQLLIPSLDWLPASDGLVSRLQPKQPLRLQFGRAPTLPGSAATLQLDGLARAPGQPKID
HLRRLHLGACPTEECKACTRCGCVTMLKSPNRTTAVKQWEQRWIKNCLCGGLWWRVPLSY
P
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacttgcggcggccagcggcaggtgggatgatggacttggcctacgtctgtgag
tgggagaaatggtccaagagcacccactgcccatcggtgcccctggcctgtgcctggtcc
tgccgaaatctcatcgccttcaccatggacctgcgcagtgatgaccaggacctgacccgc
aggatccacattctggacacagagcacccctgggacctgcactccatcccctcagagcac
cgcgaggccatcacctgcctggagtgggaccagtcaggctcccggctcctgtcagcagat
gccgatgggcagatcaagtgctggagcatggcggaccacctggctaacagctgggagagc
tcggtgggcagcctagtggaaggggaccccattgtggccctgtcctggctacacaacggt
gtgaagctggccctgcacgtggagaagtcgggcgcctccagcttcggggagaagttctcc
cgagtcaaattctcaccgtcgctcacgctgttcggcggcaagcccatggagggctggatc
gcagtgacggtcagcggcctggtcactgtgtccctgctgaagcccagtgggcaggtgctg
acatccaccgagagcctgtgccggctgcgcggccgcgtggccctggccgacatcgccttc
acgggcggcggcaacatcgtggtggccacggcggatggcagcagcgcgtcgcctgtgcag
ttctacaaggtgtgcgtgagcgtggtgagcgagaagtgccgtatcgacacagagatcctg
ccctccctgttcatgcgctgcaccaccgacctcaaccgcaaggacaagttccccgccatc
actcacctcaagttcctggcccgggacatgtcggagcaggtgcttttgtgcgcgtccagc
cagaccagcagcatcgtggagtgctggtccctgcgcaaggaggggctccctgtgaacaac
atcttccagcagatctcccccgtggttggcgacaaacagcccacgattctcaaatggcgg
atcctgtcggccaccaatgatctggaccgtgtgtcggccgtggcgctgcccaagctgccc
atctcgctcaccaacaccgacctcaaggtggccagcgacacacagttctaccctggcctc
gggctggccttggccttccacgacggcagtgtccacatcgtgcaccggctctcactgcag
accatggccgtcttctacagctccgcggccccaaggcctgtggatgagccggccatcaag
cgcccccgcaccgcaggccccgccgtgcactttaaggccatgcagctctcctggacctca
ctggccctggtgggcattgacaaccagagcaagctgagcatgctccgcctctcaccctcc
atgggccacccgctggaggtggggctggcgctgcggcacctgctcttcctgctggaatac
tgcatggtgaccggctatgactggtgggacatcctgctgcacgtgcagcccaacatggtg
cagagcctggtggagaagctacacgaggagtacacgcgccagaccgctgccctgcagcag
gtcctctccacccggatcctggccatgaaggcctcgctctgcaagctgtcgccctgcacg
gtgacccgcgtgtgcgactaccacaccaagctctttctcatcgccatcagctccaccctg
aagtcgctgctgcgcccccacttcctcaacacgcccgacaagagccccggcgaccggctg
accgagatctgcgccaagatcaccgacgtcgacattgataaggtcatgatcaacctcaag
acagaggaatttgtgctggacatgaatacactgcaggcgctgcagcagctcttgcagtgg
gtaggcgacttcgtgctgtacctgctggccagcctacccaaccagggctccctgctgagg
ccgggccacagcttcctgcgggacggcacctcgctgggcatgcttcgggaactgatggtg
gtcatccgcatctggggccttctgaagcccagctgcctgcccgtgtacacggccacctcg
gatacccaggacagcatgtccctgctcttccgcctgctcaccaagctctggatctgctgt
cgtgatgagggcccagctagcgagccggacgaggcgctggtggatgagtgctgcctgctg
cccagccagctgcttatccccagcctggactggctgcccgccagtgatggcctggtcagc
cgcctgcagcccaagcagccccttcgtctgcagttcggccgggcgcccacgctgcctggc
agtgctgccaccctgcagctcgacggcctcgccagggccccaggccagcccaagatcgac
cacctgcggaggctgcaccttggcgcctgccccacagaggaatgcaaagcctgcaccagg
tgcggctgtgtcaccatgctcaagtcgcccaacaggaccacggcggtgaagcagtgggag
cagcgctggatcaagaactgcctgtgtggcgggctctggtggcgggtgcccctcagctac
ccctga
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