Pongo abelii (Sumatran orangutan): 100454386
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Entry
100454386 CDS
T01416
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pon03009
]
100454386 (DDX52)
Enzymes [BR:
pon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100454386 (DDX52)
Ribosome biogenesis [BR:
pon03009
]
Eukaryotic type
90S particles
Helicases
100454386 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100454386
NCBI-ProteinID:
XP_002827359
Ensembl:
ENSPPYG00000008221
LinkDB
All DBs
Position
19:51676307..51738593
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AA seq
600 aa
AA seq
DB search
MDVHDLFRRLGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVSGVYS
GASQTHQKPQNGEKKEESLTERKREQSKKKRKTMTSEITSQEEGAIIQWMSSVEAKIEDK
KVQRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQN
ILDAGFQIPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALI
ISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYL
LKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYD
VEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFV
QSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFK
GVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSVANVIQQAGCPVP
EYIKGFQKLLSKQKKKMIKKPLERESISTTPKCFLEKAKDKRKKVTGHNSKKKVALEDKS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccacgatctctttcgccggctcggcgcgggggccaaattcgacacgagacgc
ttctcggcagacgcagctcgattccagataggaaaaaggaaatatgactttgattcttcg
gaggtgcttcagggactggacttttttggaaacaagaagtctgtctcaggtgtgtacagt
ggagcatcacaaacacatcagaagccccaaaatggagagaaaaaagaagagagcctaact
gaaaggaagagggagcagagcaagaaaaaaaggaagacgatgacttcagaaattacttcc
caagaagaaggtgctattatacagtggatgtcatctgtagaagcaaagattgaagacaaa
aaagttcagagagaaagtaaactaacttccggaaagttggagaatctcagaaaagaaaag
ataaacttcttgcggaataaacacaaaattcacgtccaaggaaccgatcttcctgaccca
attgctacatttcagcaacttgaccaggaatataaaatcaattctcgactacttcagaac
attctagatgcaggtttccaaattcctacgccaatccaaatgcaagccatcccagttatg
ctgcatggtcgggaacttctggcttctgctccaactggatctggaaaaacattagctttt
agcattcctattttaatgcagctgaaacaacctgcaaataaaggcttcagagccctgatt
atatcaccaacacgagaacttgccagccagattcacagagagttaataaaaatttctgag
ggaacaggattcagaatacacatgatccacaaagcagcagtggcagccaagaaatttgga
cctaaatcatctaaaaagtttgatattcttgtgactactccaaatcgactaatctattta
ttaaagcaagatccccccggaatcgacctaacaagtgttgagtggcttgtagtagacgaa
tcagataaactgtttgaagatggcaaaactgggttcagagaccagctggcttccattttc
ctggcctgcacatcccacaaggtccgaagagctatgttcagtgcaacttttgcatatgat
gttgaacagtggtgcaaactcaacctggacaatgtcatcagtgtgtccattggagcaagg
aattctgcagtagaaactgtagaacaagagcttctctttgttggatctgagactggaaaa
cttctggccatgagagaacttgttaaaaagggtttcaatccacctgttcttgtttttgtt
cagtccattgaaagggctaaagaactttttcatgagctcatatatgaaggtattaatgtg
gatgttattcatgcagagagaacacaacaacagagagataacacagtccacagtttcaga
gcaggaaaaatctgggttctgatttgtacagccttgctagcaagagggattgattttaaa
ggtgtgaacttggtgatcaactatgactttccaaccagctcagtggaatatatccacagg
ataggtcgaactggaagagcagggaataagggaaaagcaattacatttttcactgaagat
gataagccattattaagaagcgttgccaatgttatacagcaggccgggtgtcctgtacca
gaatacataaaaggttttcagaaactactaagcaaacaaaagaaaaagatgattaagaaa
ccattggaaagggagagcattagtacaactccaaaatgtttcttagaaaaagctaaggat
aaacggaaaaaggtcactggtcacaacagcaagaagaaagtagctcttgaagacaaaagt
taa
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