Pongo abelii (Sumatran orangutan): 100455014
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Entry
100455014 CDS
T01416
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100455014 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pon04131
]
100455014 (VPS8)
Membrane trafficking [BR:
pon04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100455014 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
WD40_CDC20-Fz
zf-RING_Vps41
zf-RING_11
zf_RING_Vps8_fungal
Clathrin
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
UBA_HOIP
zf-C3HC4
EIF3I
GED
Motif
Other DBs
NCBI-GeneID:
100455014
NCBI-ProteinID:
XP_024100596
Ensembl:
ENSPPYG00000014362
UniProt:
A0A2J8WHI3
LinkDB
All DBs
Position
2:194816790..195053352
Genome browser
AA seq
1426 aa
AA seq
DB search
MENEPDHENVEQSLCAKTSEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQ
NQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHP
PGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLH
SKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQ
NYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDSVE
KLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGG
QIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASKRK
AIVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQMY
DKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMDIT
SLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVVMG
NKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYIRTLLH
FDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQL
AKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEK
AEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHDILSIPGHSAEEKQSVWQKAM
DHIEELVSLKPCKAAELVATHFSGHIETVIKKLQNQVLLFKFLRSLLDPREGIHINQELL
QISPCITEQFIELLCQFSPSQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKGDI
HGAFLIMLERLQSKLQEITHQGENTKEDPSLKDVEDTMVETIALCQRNSHNLNQQQREAL
WFPLLEAMMAPQKLSSSAIPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYGKG
KLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSICL
QQYKRRQEMVDEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVGKLSENS
SEIKKGRITPSQVKMSPSYHQSKGDPTAKKGTSEPVLDPQQIQAFDQLCRLYRGSSRLAL
LTELSQNRSSESYRPFSGSQNAPAFNSIFQNENFQLQLIPPPVTED
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagcctctgtgccaagacgagtgaa
gaagagctgaataagtctttcaatctagaagcttcactttcaaaattctcttacatagat
ctggacaaggaactggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgatactcctccaacactggaaagcatactaaatgagactgatgatgaagatgag
tcttttgttcttgaggatcctacattgttaaacattgatactattgattctcactcctat
gatacttcatctgtggcaagctcagatagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcacttcatggatcagttatgcgccattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtagatgctggcttgcctacagcaatt
gcagtgtccagtctgatagcagtgggtacatctcatggattggctttaatatttgatcag
aatcaagctttgcgactctgtctgggtagcactagtgttggaggtcagtatggcgctatc
tctgccctcagtatcaacaatgattgctcaagacttctttgtggctttgctaaaggacag
atcaccatgtgggatttggccagtggaaaacttctaagatcaataacagatgctcatcct
ccaggaacagcaatattgcatatcaagtttacagatgatccaactcttgcaatttgcaac
gacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgagaacctgt
gaatctagatgtctgttcagtggttccaagggtgaagtctgctgtattgagcctttgcat
tctaagcctgagttgaaagatcatcccatcacacagttttcattattggccatggcatcc
ttgacaaaaatactggtcattggattgaaaccatccttgaaagtatggatgacttttccc
tatggccggatggatccttccagtgtgccactgctggcctggcactttgtagcagtgcaa
aattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctattggta
aagagagatgaatctggagcaatacatgttactaagcaaaagcatcttcacctatactat
gacctcatcaactttacttggataaattcacgcacagttgtgctcttagacagcgtagag
aagttgcacgtgattgatcggcaaacacaagaggaactggagacagtggagatctcagaa
gttcagctggtctacaatagcagccatttcaaatcactagccactggaggaaatgttagc
caggcactggctttggttggagagaaggcttgttatcaatccatcagtagctatggtggt
cagatcttttatttggggacaaaatctgtttatgtgatgatgctgaggagctggagagag
agagtggatcatctcctgaaacaagattgtcttacagaagccttggctcttgcatggtct
ttccatgaaggaaaagcaaaagcagtagtgggattatcaggggatgctagtaagcgaaag
gctattgttgcagaccggatggtagaaatcctattccattatgcagatcgagctctgaaa
aagtgcccagaccaaggaaaaatccaagtgatggagcagcattttcaggatatggtgcct
gtcatagttgattactgccttctgctgcagcgaaaggatcttttatttagtcagatgtat
gataaattaagtgagaattcagtggccaaaggagtatttttggagtgccttgagccatat
attttaagtgataaattggtgggaatcacaccccaagtaatgaaagacttgattgttcat
ttccaagataaaaaattaatggaaaatgtggaagcgctcattgtacatatggatatcacc
agcctagatattcagcaggtagttctcatgtgttgggaaaatcgtttatatgatgctatg
atctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaacttttcaga
gtcattgctcctcctctgaatgcaggaaaaacgctaacagatgaacaagttgttatgggc
aataagcttcttgtatatattagctgttgtctagcaggtcgtgcctatccccttggtgac
atccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctaattcgcctg
cattcagcagaggcttctcctgaggaagaaatctatccttacattcggactttgctacat
tttgacacaagagaatttcttaatgtattggcactgacttttgaagactttaaaaatgac
aagcaagctgtggaatatcaacagcgaattgtggatattttgttgaaagttatggtggag
aattcagactttaccccctcacaagtaggatgtctctttaccttccttgctcggcagctt
gcaaagcctgacaacaccttgtttgtaaacagaacactttttgatcaggtccttgaattc
ctttgtagtcctgacgatgactcccgacactctgaaagacagcaggtccttttagagttg
ctgcaggctggaggcatagttcaatttgaagagagtcgactcatccggatggcagaaaaa
gctgagttctatcaaatttgtgaatttatgtatgaaagagaacaccaatatgacaaaatt
attgattgctacttacgtgaccctctgagagaggaagaagtctttaattacattcacgat
atcttatccattcccggacacagtgcagaggagaagcagtctgtatggcagaaagcaatg
gatcatattgaggaacttgtgtccctgaagccttgtaaagctgcggagctggttgccacc
cacttttctggacatattgaaacggttattaaaaaacttcagaaccaggttttgcttttc
aaatttttgaggagtcttcttgacccaagggaaggtattcatataaatcaagaattactg
caaatatctccttgtatcacagagcagttcattgagctgttgtgtcagttcagcccatcc
caagttatagagactctgcaagtccttgagtgctaccgtctggaagaaactattcagatt
actcagaagtatcaacttcatgaagtcactgcttatctattggaaaagaaaggagatatt
catggtgccttcctaataatgttagagagactacaaagcaaacttcaagagataacacat
caaggtgaaaataccaaagaggatccctcattgaaggatgttgaagatactatggtggag
accattgctctttgccagagaaattcgcataatttgaaccagcagcaacgtgaggcactt
tggtttccattattggaggcaatgatggcccctcagaagctgtccagttcagccattcct
catctacactctgaagctctgaaatctttgaccatgcaagttttaaatagcatggcagca
tttattgcccttccatcaatcttgcaaagaatcttacaggatccagtttatggaaaagga
aaacttggagaaatccagggacttatcttgggaatgttagatacctttaactatgaacaa
accctgctggaaacaacaactagccttctaaaccaagatctccattggtcattgtgtaac
ctgagagcttcggtcaccagaggactgaatcccaaacaagattactgctctatatgtttg
cagcagtacaagagacgccaagaaatggttgatgaaattattgtctttagctgtggccat
ttgtatcactcattctgcctacaaaacaaagaatgcactgtggaatttgagggccaaaca
agatggacatgctacaaatgcagttcaagtaacaaagtaggaaaactcagtgaaaattca
tctgaaattaaaaagggaaggataacgccatcacaggtaaaaatgtctccatcgtatcat
cagtccaaaggggatcccactgctaaaaagggaacctcagaacctgttctggatccacag
caaatccaagcatttgatcagctttgccgtctctaccgaggaagctccaggctggctctc
ctcacggaactctcccagaatcgcagcagcgagagctataggccattcagtggctcgcag
aatgctcctgctttcaacagcatcttccagaatgagaacttccagctacagctcattccc
ccacctgtgactgaggattga
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integrated database retrieval system
