Pongo abelii (Sumatran orangutan): 100455348
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Entry
100455348 CDS
T01416
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X2
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03082
ATP-dependent chromatin remodeling
pon04714
Thermogenesis
pon05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100455348 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100455348 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100455348 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100455348 (ARID1A)
03021 Transcription machinery [BR:
pon03021
]
100455348 (ARID1A)
03036 Chromosome and associated proteins [BR:
pon03036
]
100455348 (ARID1A)
Transcription factors [BR:
pon03000
]
Eukaryotic type
Helix-turn-helix
ARID
100455348 (ARID1A)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100455348 (ARID1A)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100455348 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
100455348
NCBI-ProteinID:
XP_009231587
Ensembl:
ENSPPYG00000001680
LinkDB
All DBs
Position
1:complement(206877929..206966020)
Genome browser
AA seq
2280 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEG
PAVGPPQPLGKELQDGAESNGGGGGGGAGGPGAEPDLKNSNGNAGPRPALNNNLTEPPGG
GGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAAAAAAAAVFHQQHGGQQSPGLAA
LQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGA
AAAAGSKPPPSSSASASSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSS
ARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSHHAPIS
PGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYG
SQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQP
PYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQ
HPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQEL
SQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVST
SGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQ
MPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQIHT
GMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHG
QPGIPPYGTLPPGRMSHTSMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETAVAMHV
AANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNSAGMAA
SPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERKMW
VDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLNVG
TSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQG
PQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMRSNSVGIQDAFNDGSDSTFQKRNS
MTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAA
GPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRY
PPQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHE
GEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATER
RPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMT
YNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPVPPMT
RPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHI
APAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLAEST
WALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLL
DPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVVENDEEIAFSGKDKPASENSEEKL
ISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTEL
LLSRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRSSTLTED
GAKSSEAIKESSKFPFGINPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVS
NTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNK
VEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFST
LGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCRE
MAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEP
TSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6843 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccg
ccctcggagctgaagaaagccgagcagcagcagcgggaggaggcggggggcgaggcggcg
gcggcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggc
cccgccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaat
gggggtggcggcggcggcggagccggcgggcccggcgcggagccggacctgaagaactcg
aacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgcccggcggc
ggcggtggcggcagcagcgatggggtgggggcgcctcctcactcagccgcggccgccttg
ccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgccgccgcc
gccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctggcagcg
ctgcagagcggcggcggcgggggcctggagccctacgcggggccccagcagaactctcac
gaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagcgcctacccc
ccgcctgccccggcctacgcgctgagctccccgagaggtggcactccgggctccggcgcg
gcggcggctgccggctccaagccgcctccctcctccagcgcctccgcctcctcgtcttcg
tccttcgctcagcagcgcttcggggccatggggggaggcggcccctccgcggccggcggg
ggaactccccagcccaccgccacccccaccctcaaccaactgctcacgtcgcccagctcg
gcccggggctaccagggctaccccgggggcgactacggtggcgggccccaggacgggggc
gccggcaagggcccggcggacatggcctcgcagtgttggggggctgcggcggcggcagcg
gcggcggcggcggccgcctcgggaggggcccaacaaaggagccaccacgcgcccatcagc
cccgggagcagcggcggcggggggcagccgctcgcccggacccctcagccatccagtcca
atggatcagatgggcaagatgagacctcagccatatggcgggactaacccatactcgcag
caacagggacctccgtcaggaccgcagcaaggacatgggtacccagggcagccatatggg
tcccagaccccacagcggtacccgatgaccatgcagggccgggcgcagagtgccatgggc
ggcctctcttatacacagcagattcctccttatggacaacaaggccccagcgggtatggt
caacagggccagactccatattacaaccagcaaagtcctcaccctcagcagcagcagcca
ccctactcccagcaaccaccgtcccagacccctcatgcccaaccttcgtatcagcagcag
ccacagtctcaaccaccacagctccaatcctctcagcctccatactctcagcagccatcc
cagcctccacatcagcagtccccggctccatacccctcccagcagtccacgacacagcag
cacccccagagccagcccccctactcacagccacaggctcagtctccttaccagcagcag
caacctcagcagccagcaccctcgacgctttcccagcaggctgcatatcctcagccccag
tctcagcagtcccagcaaactgcctattcccagcagcgcttccctccaccgcaggagcta
tctcaagattcatttgggtctcaggcatcctcagccccctcaatgacctccagtaaggga
gggcaagaagatatgaacctgagccttcagtcaagaccctccagcttgcctgatctatct
ggttcaatagatgacctccccatggggacagaaggagctctgagtcctggagtgagcaca
tcagggatttccagcagccaaggagagcagagtaatccagctcagtctcctttctctcct
catacctcccctcacctgcctggcatccgaggcccttccccgtcccctgttggctctccc
gccagtgttgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggcaaccag
atgccacctcggccacccagtggccagtcggacagcatcatgcatccttccatgaaccaa
tcaagcattgcccaagatcgaggttatatgcagaggaacccccagatgccccagtacagt
tccccccagcccggctcagccttatctccgcgtcagccttccggaggacagatacacaca
ggcatgggctcctaccagcagaactccatggggagctatggtccccaggggggtcagtat
ggcccacaaggtggctaccccaggcagccaaactataatgccttgcccaatgccaactac
cccagtgcaggcatggctggaggcataaaccccatgggtgccggaggtcaaatgcatgga
cagcctggcatcccaccttatggcacactccctccagggaggatgagtcacacctccatg
ggcaaccggccttatggccctaacatggccaatatgccacctcaggttgggtcagggatg
tgtcccccaccagggggcatgaaccggaaaacccaagaaactgctgtcgccatgcatgtt
gctgccaactctatccaaaacaggccaccaggctaccccaatatgaatcaagggggcatg
atgggaactggacctccttatggacaagggattaatagtatggctggcatgatcaaccct
cagggacccccatattccatgggtggaaccatggccaacaattctgcagggatggcagcc
agcccagagatgatgggccttggggatgtcaagttaactccagccaccaaaatgaacaac
aaggcagatgggacacccaagacagaatccaaatccaagaaatccagttcttctactaca
accaatgagaagatcaccaagttgtatgagctgggtggtgagcctgagaggaagatgtgg
gtggaccgttatctggccttcactgaggagaaggccatgggcatgacaaatctgcctgct
gtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagattggtgga
ttgactcaggtcaacaagaacaaaaaatggcgggaacttgcaaccaacctcaatgtgggc
acttcaagcagtgctgccagctccttgaaaaagcagtatatccagtgtctctatgccttt
gaatgcaagattgaacggggagaagaccctcccccagacatctttgcagctgctgattcc
aagaagtcccagcccaagatccagcctccctctcctgcgggatcaggatctatgcagggg
ccccagactccccagtcaaccagcagttccatggcagaaggaggagacttaaagccacca
actccagcatccacaccacacagtcagatccccccattgccaggcatgaggagcaattca
gttgggatccaggatgcctttaatgatggaagtgactccacattccagaagcggaattcc
atgactccaaaccctgggtatcagcccagtatgaatacctctgacatgatggggcgcatg
tcctatgagccaaataaggatccttatggcagcatgaggaaagctccagggagtgatccc
ttcatgtcctcagggcagggccccaatggcgggatgggtgacccctacagtcgtgctgcc
ggccctgggctaggaaatgtggcgatgggaccacgacagcattatccctatggaggtcct
tatgacagagtgaggacggagcctggaatagggcctgagggaaacatgagcactggggcc
ccacagccgaatctcatgccttccaacccagactcggggatgtattctcctagccgctac
cccccgcagcagcagcagcagcagcaacgacatgattcctatggcaatcagttctccacc
caaggcaccccttctggcagccccttccccagccagcagactacaatgtatcaacagcag
cagcagaattacaagcggccaatggatggcacatatggccctcctgccaagcggcacgaa
ggggagatgtacagcgtgccatacagcactgggcaggggcagcctcagcagcagcagttg
cccccagcccagccccagcctgccagccagcaacaagctgcccagccttcccctcagcaa
gatgtgtacaaccagtatggcaatgcctatcctgccactgccaccgctgctactgagcgc
cgaccagcaggcggcccccagaaccaatttccattccagtttggccgagaccgtgtctct
gcaccccctggcaccaatgcccagcaaaacatgccaccgcaaatgatgggcggccccata
caggcatcagctgaggttgctcagcaaggcactatgtggcaggggcgtaatgacatgacc
tataattatgccaacaggcagagcacgggctctgccccccagggccccgcctatcatggc
gtgaaccgaacagatgaaatgctgcacacagatcagagggccaaccacgaaggcccgtgg
ccttcccatggcacacgccagcccccatatggtccctctgcccctgtgccccccatgaca
aggccccctccatctaactaccagcccccgccaagcatgcagaatcacattcctcaggta
tccagccctgctcccctgccccggccaatggagaaccgcacctctcctagcaagtctcca
ttcctgcactctgggatgaaaatgcagaaggcaggtcccccagtacctgcctcgcacata
gcacctgcccctgtgcagccccccatgattcggcgggatatcaccttcccacctggctct
gttgaagccacacagcctgtgttgaagcagaggaggcggctcacaatgaaagacattgga
accccggaggcatggcgggtaatgatgtccctcaagtctggtctcctggcagagagcaca
tgggcattagataccatcaacatcctgctatatgatgacaacagcatcatgaccttcaac
ctcagtcagctcccagggttgctagagctccttgtagaatatttccgacgatgcctgatt
gagatctttggcattttaaaggagtatgaggtgggtgacccaggacagagaacactactg
gatcctgggaggttcagcaaggtgtctagtccagctcccatggagggtggggaagaagaa
gaagaacttctaggtcctaaactagaagaggaagaagaagaggaagtagttgaaaatgac
gaggagatagccttttcaggcaaggacaagccagcttcagagaatagtgaggagaagctg
atcagtaagtttgacaagcttccagtaaagatcgtacagaagaatgacccatttgtggtg
gactgctcagataagcttgggcgtgtgcaggagtttgacagtggcctgctgcactggcgg
attggtgggggggacaccactgagcatatccagacccacttcgagagcaagacagagctg
ctgctttcccggcctcatgcaccctgcccaccagcccctcggaagcatgtgacaacagca
gagggtacgccagggacaacagaccaggaggggcccccgcctgatggacctccagaaaaa
cggatcacagccactatggatgacatgttgtctactcggtctagcaccttgaccgaggat
ggagctaagagttcagaggccatcaaggagagcagcaagtttccatttggcattaaccca
gcacagagccaccggaacatcaagatcctagaggacgaaccccacagtaaggatgagacc
ccactgtgtacccttctggactggcaggattctcttgccaagcgctgcgtctgtgtctcc
aataccattcgaagcctgtcatttgtgccaggcaatgactttgagatgtccaaacaccca
gggctgctgctcatcctgggcaagctgatcctgctgcaccacaagcacccagaacggaag
caggcaccactaacttatgagaaggaggaggaacaggaccaaggggtgagctgcaacaaa
gtggagtggtggtgggactgcttggagatgctccgggaaaacaccttggttacactcgcc
aacatctcggggcagttggacctatccccataccccgagagcatttgcctgcctgtcctg
gacggactcctacactgggcagtttgcccttcagctgaagcccaggaccccttttccacc
ctgggccccaatgccgtcctttccccgcaaagactggtcttggaaaccctcagcaaactc
agcatccaggacaacaatgtggacctgattctggccacaccccccttcagccgcctggag
aagttgtatagcactatggtgcgcttcctcagtgaccgaaagaacccggtgtgccgggag
atggctgtggtactgctggccaacctggctcagggggacagcctggcagctcgtgccatt
gcagtgcagaagggcagtatcggcaacctcctgggcttcctagaggacagccttgccgcc
acgcagttccagcagagccaggccagcctcctccacatgcagaacccaccctttgagcca
actagtgtggacatgatgcggcgggctgcccgcgcgctgcttgccctggccaaggtggac
gagaaccactcagagtttactctgtacgaatcacggctgttggacatctcggtatcaccg
ttgatgaactcattggtttcacaagtcatttgtgatgtactgtttttgattggccagtca
tga
DBGET
integrated database retrieval system
