Pongo abelii (Sumatran orangutan): 100456227
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Entry
100456227 CDS
T01416
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X4
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100456227 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100456227 (CNOT3)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100456227 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100456227 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
100456227
NCBI-ProteinID:
XP_009231366
Ensembl:
ENSPPYG00000010372
LinkDB
All DBs
Position
20:60510540..60529624
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AA seq
753 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHV
RMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKPVHSNQHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSALGPKASPA
PSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGGGGGGSGSNSNSSAGGGA
GKQNGATSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGA
GGVAPGSGNNSGGPSLLVPLPVNPPSSPTPSFSDAKAAGALLNGPPQFSTAPEIKAPEPL
SSLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVC
PLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTV
EFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFE
QGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagatatttggcagaagctccacaatgcagccaatgcgaaccag
aaagaaaagtatgaggctgacctgaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcgtccaacgagatcaaggacaagaggcagcttatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcttacagcaaggagggcctgggcctggcccagaaggtagatcctgcccagaaggag
aaggaagaggttggccagtggctcacgaataccatcgacacgctcaacatgcaggtggac
cagtttgagagtgaagtggagtcactgtcagtgcagacacgcaagaagaagggcgacaag
gataagcaggaccggatcgagggcttgaagcggcacatcgagaagcaccgctatcacgtg
cgcatgttagagaccatcctgcgcatgctggacaatgactccatcctcgttgatgccatc
cgcaagatcaaggacgacgttgagtactatgttgactcatcccaggaccctgacttcgag
gagaacgagtttctctatgatgacctggacctcgaggacattccacaggcgctggtcgcc
acctccccccccagccacagccacatggaggatgagatcttcaaccagtccagcagcacg
cccacctcgaccacctccagctctcccatcccgcccagcccagccaactgtaccacggaa
aactctgaagatgataagaagaggggacgttccacagacagtgaagtcagccagtctcca
gccaaaaacggctccaagcctgtccacagcaaccagcaccctcagtccccagctgtgccg
cccacctacccctccggccccccgcctgctgcctctgccttgagcaccactcctggcaac
aatggggtccccgccccagcagcacccccaagtgccctgggccccaaggccagtccagct
cccagccacaactcgggcacccctgctccctatgcccaggctgtggccccaccagctccc
agtgggcccagcacgacccagccccggccccccagcgtccagcctagcggaggcggtgga
ggcggcggcggaggcggagggagcggcagcaatagtaacagcagtgccggtggaggggct
ggcaagcagaatggcgccaccagttacagctcagttgtggcagacagcccagcagaggtg
gctttgagcagcagtgggggcaacaatgccagcagccaggccctgggccccccttctggc
ccccacaacccacctcccagcacctcgaaggaacccagtgcagcagccccaacgggggct
gggggcgtggccccaggctcagggaacaactcagggggacccagcctcctggtgccactg
cctgtgaatcctcccagctccccaacgcccagcttcagcgatgccaaggcagccggtgcc
ctgctcaatgggcctccacagttcagcaccgccccggaaatcaaggcccctgagcctctg
agctccttgaagtccatggcggaacgggcagccatcagctctggcatcgaggaccctgtg
ccaacgctgcacctgactgagcgagacatcatcctgagcagcacatcagcacctccggcc
tcagcccagccgcccctgcagctgtcagaggtgaacataccgctgtcgctgggtgtctgt
ccactgggccctgtgcccctcaccaaggagcagctctatcagcaggccatggaagaggcc
gcctggcaccacatgcctcacccctctgactctgagcgtatccggcagtacctcccccgg
aacccctgtccgacgcccccctaccaccaccagatgccacccccacactcggacactgtg
gagttctaccagcgcctgtcgaccgagacactcttcttcatcttctactatctggagggc
actaaggcacagtacctggcagccaaggccctaaagaagcagtcgtggcgattccacacc
aagtacatgatgtggttccagaggcacgaggagcccaagaccatcactgacgagttcgag
cagggcacctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttc
acctttgagtaccgctacctggaggaccgggacctccagtga
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