Pongo abelii (Sumatran orangutan): 100456491
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Entry
100456491 CDS
T01416
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100456491 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100456491 (LSM1)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100456491 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
100456491 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
100456491
NCBI-ProteinID:
XP_009241978
Ensembl:
ENSPPYG00000018521
UniProt:
A0A663DFY4
LinkDB
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Position
7:complement(40113724..40126714)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgcctggcaccgccagcctcatcgaggacattgacaaaaagcacttggtt
ctgcttcgagatggaaggacgcttataggctttttaagaagcattgatcaatttgcaaac
ttagtgctacatcagactgtggagcgtattcatgtgggcaaaaaatacggtgatattcct
cgagggatttttgtggtcagaggagaaaatgtggtcctactaggagaaatagacttggaa
aaggagagtgacacacccctccagcaagtatccattgaagaaattctagaagagcaaagg
gtggaacagcagaccaagctggaagcagagaagttgaaagtgcaggccctgaaggaccga
ggtctttccattcctcgagcagatactcttgatgagtactaa
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