Pongo abelii (Sumatran orangutan): 100457298
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Entry
100457298 CDS
T01416
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pon04121
]
100457298 (PDZRN3)
Enzymes [BR:
pon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100457298 (PDZRN3)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100457298 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Sina_ZnF
zf-TRAF
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
CEP104_ZnF
PDZ_Tricorn
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
100457298
NCBI-ProteinID:
XP_002813562
Ensembl:
ENSPPYG00000013713
UniProt:
H2PA91
LinkDB
All DBs
Position
2:80604441..80854236
Genome browser
AA seq
1066 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAYAARGCGQVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPSPPVLDPYLLPEEHPSAHEYYDPNDYIGDIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHDEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDADYLGIPVDECERFRELLELKCQVKSAT
PYSLYYPSGPLDAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLR
RAAEGISCPSSEGAMGTTEAYGPASKNLLSITEDPEVGPPTYSPSLKELDPNQPLESKER
RASDGSRSPTPSQKLGSAYLPPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQM
SLVSMCKDLSSPTPSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTD
DDAVSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILEL
SHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgtgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaagagctcaaccacgtcctgccgctcaagcgccttatcctcaagctggacatc
aagtgcgcgtacgcggcgcgcggctgcggccaggtggtcaagctgcagcagctgccggag
cacctcgaacgctgcgacttcgcgcccgcgcgctgtcgccacgcgggttgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggcccgtgggc
cgctgccaggagggctgcgggctgcccttgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgagcgctgcgggcgcacaacggcgcgctgcaggcccgcctgggcgctctg
cacaaggcgctcaagaaggaggcgctgcgcgctgggaagcgcgagaagtcgctggtggcc
cagctggccgcggcgcagctcgagctgcagatgaccgcgctgcgctaccagaagaaattc
accgaatacagcgcgcgcctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggcgaagaaaccaaaagcctgactcttgtcctgcatcgggactccggctccctggga
ttcaatattattggtggccggccgagtgtggataaccacgatggatcatccagtgaagga
atctttgtatccaagatagtggacagtgggcctgcagccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttatccagagcaactcatgaccaggct
gtggaagctttcaagacagccaaggagcccatagtggtgcaggtgttgagaagaacacca
aggaccaaaatgttcacgcctccatcagagtcgcagctggtagacacaggaacccaaacc
gacatcacctttgaacatatcatggccctcactaagatgtcctctcccagcccacctgtg
ctggatccctatctcttgccagaggagcatccctcagcccatgaatactacgatccaaat
gactacattggagacatccatcaggagatggacagggaggagttggagctggaggaagtg
gacctctacagaatgaacagccaggacaagctgggcctcactgtgtgctaccggacggac
gatgaagacgacattgggatttatatcagtgagattgaccctaacagcattgcagccaag
gatgggcgcatccgagaaggagaccgcattatccagattaatgggatagaggtgcagaac
cgtgaagaggctgtggctcttctaaccagtgaagaaaataaaaacttttcattgctgatt
gcaaggcctgaactccagctggatgagggctggatggatgatgacaggaacgactttctg
gatgacctgcacatggacatgctggaggagcagcaccaccaggccatgcaattcacagct
agcgtgcttcagcagaagaagcacgacgaagacggtgggaccacagatacagccaccatc
ttgtccaatcagcacgagaaggacagcggtgtggggcggaccgacgagagcacccgcaat
gatgagagctcggagcaagagaacaacggcgacgacgccaccgcatcctccaacccgctg
gcggggcagaggaagctcacctgcagccaggacaccttgggcagcggcgacctgcccttc
agcaacgagtccttcatttcggccgactgcacggacgccgactacctggggattccggtg
gacgagtgcgagcgcttccgcgagctcctggagctcaagtgccaggtgaagagcgccacc
ccttacagcctgtactaccctagcggccccctggacgccggcaagagtgaccctgagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgcgcccacaagatgcagcagctcaaggagcagtaccgcgagtcctggatg
ctgcacaacagcggcttccgcaactacaacaccagcatcgacgtgcgcaggcacgagctc
tcagacatcaccgagctcccggagaaatccgacaaggacagctcgagcgcctacaacaca
ggcgagagctgccgcagcaccccgctcaccctggagatctcccccgacaactccttgagg
agagcggcggagggcatcagctgcccgagcagcgaaggggctatggggaccacggaagcc
tacgggccagcctccaagaatctgctctccatcacggaagatcccgaagtgggcccccct
acctatagcccatccctgaaggagctggaccccaatcagcccctggaaagcaaagaacgg
agagccagcgatgggagccggagccccacgcccagccagaagctgggcagcgcctacctg
cccccctaccaccactccccatacaagcacgcgcacatcccggcgcacgcccagcactac
cagagctacatgcagctgatccagcagaagtcggccgtggagtacgcgcaaagccagatg
agcctggtgagcatgtgcaaggacctgagctctcccaccccgtcggagccgcgcatggag
tggaaggtgaagatacgcagcgacgggacgcgctacatcaccaagaggcccgtgcgggac
cgcctgctgcgggagcgcgccttgaagatccgggaagagcgcagcggcatgaccactgac
gatgacgcggtgagcgagatgaagatggggcgctactggagcaaggaggagaggaagcag
cacctggtgaaggccaaggagcagcggcggcggcgagagttcatgatgcagagcaggttg
gattgtctcaaggagcagcaagcagccgacgacaggaaggagatgaacattctcgaactg
agccacaaaaagatgatgaagaagaggaataaaaaaatcttcgataactggatgacgatc
caagaactcttaacccacggcacaaaatccccggacggcactagagtatacaattccttc
ctatcggtgactactgtataa
DBGET
integrated database retrieval system
