KEGG   Pongo abelii (Sumatran orangutan): 100457548
Entry
100457548         CDS       T01416                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pon03036]
    100457548 (KDM4B)
Enzymes [BR:pon01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     100457548 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     100457548 (KDM4B)
Chromosome and associated proteins [BR:pon03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100457548 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD LBR_tudor SLX1_C DUF7141
Other DBs
NCBI-GeneID: 100457548
NCBI-ProteinID: XP_024092858
Ensembl: ENSPPYG00000009423
UniProt: A0A2J8SC18
LinkDB
Position
20:4882579..5066533
AA seq 1130 aa
MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQQAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALTSPELSSWSA
SRASLKAKLLRRQISLKENRHWRKTEEERKPSLERKKEQTKRPGLSSHRKRSQPKKPKPE
DPKSPGEGTAGAALLEEAGGSVKEEAGPEADPEEEEEEPQPLPHGREAEGAEEDGRGKLR
PTKAKSERKKKSFGLLPPQLPPPPAHFPSEEALWLPSPLEPPVLGPGRAATEESRLPAPL
NVVPPEVPSEELEAKPRPIIPMLYVVPRPGKAAFNQEHVSCQQAFEHFAQKGPTWKEPVS
PMELTGPEDGGASSGASRMETKARAGEGQAPSTFSKLKMEIKKSRRHPLGRPPTRSPLSV
VKQEASSDEEASPFSGEEDVSDPEALRPLLCLQWKNRAASFQAERKFNAAAARTEPYCAI
CTLFYPYCQALQTEKEAPTASLGEGSSATLPSKSGQKTRPLIPEMCFTSGGENTEPLPAN
SYIGDDGTSPLIACGKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLCNLRGGA
LQMTTDRRWIHVICAIAVPEARFLNVIERHPVDISTIPEQRWKLKCVYCRKRMKKVSGAC
IQCSYEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCLKHKSGGHAVQLLRAVSLGQVVI
TKNRNGLYYRCRVIGAATQTCYEVNFDDGSYSDNLYPESITSRDCVRLGPPSEGELVELR
WTDGNLYKAKFISSVTSHIYQVEFEDGSQLTVKRGDIFTLEEELPKRVRSRLSLSTGAPQ
EPTFSGEEAKAAKRPRVGTPLATEDSGRSQDYVAFVESLLQAQGRPGAPF
NT seq 3393 nt   +upstreamnt  +downstreamnt
atggggtctgaggaccacggcgcccagaaccccagctgtaaaatcatgacgtttcgccca
accatggaagaatttaaagacttcaacaaatacgtggcctacatagagtcgcagggagcc
caccgggcgggcctggccaagatcatccccccgaaggagtggaagccgcggcagacgtat
gacgacatcgatgacgtggtgatcccggcgcccatccagcaggtggtgacgggccagtcg
ggcctcttcacgcagtacaacatccagaagaaggctatgacagtgggcgagtaccgccgc
ctggccaacagcgagaagtactgtaccccgcggcaccaggactttgacgaccttgaacgc
aaatactggaagaacctcacctttgtctccccgatctacggggctgacatcagcggctct
ttgtatgatgacgatgtggcccagtggaacatcgggagcctccggaccatcctggacatg
gtggagcgtgagtgcggcacgatcattgagggcgtgaacacgccctacctgtactttggc
atgtggaagactaccttcgcctggcacaccgaggacatggacctgtacagcatcaactac
ctgcacttcggggagcccaagtcctggtatgccatcccgccagagcacggcaagcgcctg
gagcggctggccatcggcttcttccccgggagctctcagggctgcgacgccttcctgcgg
cataagatgaccctcatctcgcccatcatcctgaagaaatacgggatccccttcagccgg
atcacgcagcaggccggggagttcatgatcacctttccctatggctaccatgctggcttc
aatcacgggttcaactgtgcagaatctaccaacttcgccaccctgcggtggattgactac
ggcaaagtggccactcagtgcacgtgccggaaggacatggtcaagatctccatggacgtg
ttcgtgcgcatcctgcagcccgagcgctacgagctgtggaagcagggcaaggacctcacg
gtgctggaccacacgcggcccacagcgctcaccagccctgagctgagctcctggagtgca
tcccgggcctcgctgaaggccaagctcctccgcagacaaattagtctgaaagaaaacaga
cactggagaaagactgaggaggagaggaaaccaagtctagaaaggaagaaagagcagacc
aaaaggccggggctgtcgtctcaccggaaacggagccagcccaagaagccgaagcccgaa
gaccccaagtcccctggggagggtacggctggggcggcgctcctagaggaggctgggggc
agcgtgaaggaggaggccgggccggaggctgaccccgaggaggaggaggaggagccgcag
ccactgccacacggccgggaggccgagggcgcagaagaggacgggaggggcaagctgcgg
ccaaccaaggccaagagcgagcggaagaagaagagcttcggcctgctgcccccgcagctg
ccacccccgcctgctcacttcccctcagaggaggcgctgtggctgccatccccactggag
cccccggtgctgggcccgggccgtgcggccacggaggaaagccgcctgccggcgcccctc
aacgtcgtgccccctgaggtgcccagtgaggagctagaggccaagcctcggcccatcatc
cccatgctgtacgtggttcctcggccaggcaaggcagccttcaaccaggagcacgtgtcc
tgccagcaggcctttgagcactttgcccagaagggcccgacctggaaggaaccagtctcc
cccatggagctgacggggccagaggacggtggagccagcagtggggccagtcgcatggag
accaaagcccgggccggagaggggcaggcaccgtccacattttccaaattgaagatggag
atcaagaagagccggcgccatcccctgggccggccgcccacccggtccccgctgtcggtg
gtgaagcaggaggcctcaagtgacgaggaggcatcccctttctccggggaggaagatgtg
agtgaccccgaggccttgaggccgctgctgtgtctgcagtggaagaacagggcggccagc
ttccaggccgagaggaagttcaacgcggcggctgcgcgcacggagccctactgcgccatc
tgcacgctcttctacccctactgccaggccctacagactgagaaggaggcacccacagcc
tccctcggagagggctcctcggccacattaccctccaaaagcggtcagaagacccgaccg
ctgatccccgagatgtgcttcacctctggcggtgagaacacggagccgctgcctgccaac
tcctacatcggcgacgacgggaccagccccctgatcgcctgcggcaagtgctgcctgcag
gtccatgccagttgctatggcatccgtcccgagctggtcaatgaaggctggacatgttcc
cggtgcgcggcccacgcctggactgcggagtgctgcctgtgcaacctgcgaggaggtgcg
ctgcagatgaccaccgataggaggtggatccacgtgatctgcgccatcgcagtccccgag
gcgcgcttcctgaatgtgattgagcgccaccctgtggacatcagcaccatccctgagcag
cggtggaagctgaaatgcgtgtactgccggaagcggatgaagaaggtgtcgggtgcctgt
atccagtgctcctacgagcactgctccacgtccttccacgtgacctgcgcccacgccgcc
ggtgtgctcatggagccggacgactggccctacgtggtctccatcacctgcctcaagcac
aagtcggggggtcacgctgtccagctcctgagggccgtgtccctaggccaggtggtcatc
accaagaaccgcaacgggctgtactatcgctgtcgcgtcatcggtgccgccacgcagacc
tgctacgaagtgaacttcgacgatggctcctacagtgacaacctgtaccctgagagcatc
acgagtagggactgtgtccggctgggacccccttccgagggggagctggtggagctccgg
tggactgatggcaacctctacaaggccaagttcatctcctccgtcaccagccacatctac
caggtggagtttgaggacgggtcccaactgacggtgaagcgtggggacatcttcaccctg
gaggaggagctgcccaagagggtccgctctcggctgtcactgagcacgggggcaccgcag
gagcccaccttctcgggggaggaggccaaggccgccaagcgcccgcgtgtgggcacccca
cttgccacggaggactcggggcggagccaggactacgtggccttcgtggagagcctcctg
caggcgcagggccggcccggagcccccttctag

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