Pongo abelii (Sumatran orangutan): 100457692
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Entry
100457692 CDS
T01416
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X2
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100457692 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pon01007
]
100457692 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pon03016
]
100457692 (VARS1)
Enzymes [BR:
pon01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100457692 (VARS1)
Amino acid related enzymes [BR:
pon01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100457692 (VARS1)
Transfer RNA biogenesis [BR:
pon03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100457692 (VARS1)
Prokaryotic type
100457692 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
Jag_N
Motif
Other DBs
NCBI-GeneID:
100457692
NCBI-ProteinID:
XP_024104848
Ensembl:
ENSPPYG00000016460
LinkDB
All DBs
Position
5:complement(31992895..32011237)
Genome browser
AA seq
1265 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRICLQPPPTSRTPFPPPRLPAL
EQGPGGLWVWGATAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALG
LRSSAQDPQAVLGALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLDPPA
RRIWNNVTRWFVTCVRQPEFRAVLGEVVLYSGARPLSHQPGPEAPALPKTAAQLKKEAKK
REKLEKFQQKQKIQQQQPHPGEQKKPKPEKREKRDPGVITYDLPTPPGEKKDISGPMPDS
YSPRYVEAAWYTWWEQQGFFKPEYGRPNVSAANPRGVFMMCIPPPNVTGSLHLGHALTNA
IQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLQEVWKW
KEEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSAAVTEAFVRLHEEGVIYRSTRLVNWSC
TLNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIE
TMLGDVAVAVHPKDTRYQHLKGKNVIHPFLSRSLPIVFDEFVDMDFGTGAVKITPAHDQN
DYEVGQRHGLEAISIMDSRGALINVPPPFLGLPRFEARKAVLVALKERGLFRGIEDNPMV
VPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIREW
CISRQLWWGHRIPAYFVTVSDPAVPPGEDPDGRYWVSGRNEAEAQEKAAKEFGVSPDKIS
LQQDEDVLDTWFSSGLFPLSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLK
LTGRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIYGISLQGLHDQLLNSNLDPSEV
EKAKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKF
ALRGLGKGFVPSPTSQPGGHESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWL
YELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDIGLRLLSPFMPFVTEELFQRLPRRM
PQAPPSLCVTPYPEPSECSWKDPEAEAALELALSITRAVRSLRADYNLTRIRPDCFLEVA
DEATGALASAVSGYVQALASAGVVAVLALGAPAPQGCAVALASDRCSIHLQLQGLVDPAR
ELGKLQAKRVEAQRQAQRLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEAIAL
FQKML
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctctacgtctcccctcacccagatgccttccccagcctccgagccctcata
gccgctcgctatggggaggctggggagggtcccggatggggaggagcccacccccgcatc
tgtctccagccgcccccgactagcaggactccctttcccccaccccgcctgccggccctg
gagcaggggcctggtgggctctgggtgtggggggccacggctgtggcccagctgctgtgg
ccagcaggcctggggggcccagggggcagccgggcggctgtccttgtccaacagtgggtc
agttacgccgacacggagttaataccagctgcctgtggagcaacgctgccggccctggga
ctccgaagctcggcccaggacccccaggctgtgctgggggccctgggcagggccctgagc
cccttggaggagtggcttcggctgcacacctacttggccggggaggcccccactctggct
gacctggcggctgtcacagccttgctgctgcctttccgatatgtcctagacccacctgcc
cgccggatctggaataatgtgactcgctggtttgtcacatgtgtccggcagccagaattc
cgagccgtgctgggagaagtggttctatactcaggagccaggcctctctctcatcagcca
ggccccgaggctcctgccctcccaaagacagctgctcagctcaagaaagaggcaaagaaa
cgggagaagctagagaaattccaacagaagcagaagatccaacagcagcagccacatcca
ggggagcagaagaaaccaaaaccagagaagagggagaaacgggatcctggggtcattacc
tatgacctcccaaccccacccggggaaaagaaagatatcagtggccccatgcccgactcc
tacagccctcggtatgtggaggctgcctggtacacttggtgggagcagcagggcttcttc
aagccagaatatgggcgtcctaatgtgtcagcagcaaatccccgaggtgtcttcatgatg
tgcatcccaccccccaacgtgacaggctccctgcacctgggccacgcgctcaccaatgcc
atccaggactccctgactcgatggcaccgcatgcgtggggagaccaccctgtggaaccct
ggctgtgaccatgcaggtattgccacccaggtggtggtggagaagaagctatggcgtgag
caggggctgagccggcaccagctgggccgcgaggcttttctacaggaagtctggaagtgg
aaggaggagaaaggtgaccggatttaccaccagttgaagaagctcggcagctccttggac
tgggatcgagcctgtttcaccatggaccctaaactctcagcagctgtgacagaggccttt
gtccggcttcacgaggaaggcgtcatctatcgcagtacccgccttgttaactggtcctgc
accctcaactccgccatctctgacattgaggtggataagaaggagctgacaggtcgcacc
ctgctctccgtgcctggctacaaggagaaggtggagttcggggtcctcgtgtcctttgcc
tataaggtccaaggctcagacagcgacgaggaggtggtggtggcaacaactcggatcgag
acaatgctgggagatgtggctgtagctgtgcaccccaaagataccagataccagcacctg
aaggggaagaatgtgatccacccgttcctgtctcggagccttcccattgtcttcgatgaa
tttgtggacatggactttggcacaggtgctgtgaagatcacccccgcacatgaccaaaac
gactatgaagttgggcagcggcacgggctggaggccatcagcatcatggactcccggggg
gccctcatcaacgtgcctccgcctttcctgggcctgcccaggtttgaggccaggaaagcg
gtgctggtggcgctgaaggagcggggactgttccgtggcattgaggacaaccccatggtg
gtgccactttgcaaccggtcgaaggacgtggtagagcctctgctgcggccgcagtggtac
gttcgctgtggggagatggcccaggctgccagcgccgctgtgactcggggtgacctccgc
atcctgcctgaggcccatcagcgcacatggcatgcctggatggacaacatccgggagtgg
tgcatttccaggcagctgtggtggggccatcgcatcccagcctactttgtcactgtcagt
gacccagcggtgccccctggggaggaccctgatgggcggtactgggtgagcggacgcaat
gaggcggaggcccaggagaaggcagccaaggagttcggagtgtcccctgacaagatcagt
ctccagcaagatgaggatgtattggatacctggttctcctccggcctcttccctttatcc
attttgggctggcccaaccagtcagaagacttgagtgtgttctaccctgggacactgctg
gagaccggtcacgacatcctcttcttctgggtagcccggatggtcatgctgggcctgaag
ctcacgggcaggctgccctttagagaggtctacctccatgccatcgtgcgagatgctcac
ggccggaagatgagcaagtctctaggcaatgtcatcgatcccctggacgtcatctatgga
atctccctgcagggcctccacgaccagctgctgaacagcaacctggatcccagcgaggtg
gagaaggccaaagaagggcagaaagctgacttcccagcggggattcctgaatgtggcact
gatgctctccggtttggattatgtgcctacacgtcccagggtcgtgacatcaacctggat
gtgaaccggatactcggttaccgccacttctgcaacaagctctggaatgccaccaagttt
gcccttcgtggccttgggaagggttttgtgccctcacccacctcccagcccggaggccat
gagagcctggtggaccgctggatccgcagccgcctcacagaggctgtgaggctcagcaat
caaggcttccaggcctatgacttcccggccgtcaccactgcccagtacagcttctggctc
tatgagctctgtgacgtctacttggagtgcctgaaacctgtactgaatggggtggaccag
gtggcagccgagtgtgcccgccagaccctgtacacttgcctggacattggcctgcggctg
ctctcacccttcatgcccttcgtgacggaggagctgttccagaggctgccccggaggatg
ccgcaagctccccctagcctctgtgttaccccctacccggagccctcagagtgctcctgg
aaggaccctgaggcagaagccgcccttgagctggcgctaagcatcacgcgagccgtgcgc
tccctgcgggccgactacaacctcacccggatccggcctgactgtttcctggaagtggcg
gatgaggccacgggcgccctggcatcggcggtatcgggctacgtgcaggcactggccagc
gcaggtgtggtggctgttctggccctgggggctcccgccccccagggttgcgctgtagct
ctggcctctgatcgctgctccatccacctgcagctgcaggggctggtggaccctgcacgg
gagctgggcaagctgcaagcaaagcgagttgaggcccagcggcaggcccagcgtctgcgg
gaacgccgtgccgcctcgggctaccctgtcaaggtgccgctcgaagtccaggaggcagat
gaagccaagctccaacagacagaagcagagctgaggaaggtggacgaggccatcgcccta
ttccagaagatgctgtga
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integrated database retrieval system
