Pongo abelii (Sumatran orangutan): 100457991
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Entry
100457991 CDS
T01416
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100457991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100457991
03016 Transfer RNA biogenesis [BR:
pon03016
]
100457991
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
100457991
Transfer RNA biogenesis [BR:
pon03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
100457991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
100457991
NCBI-ProteinID:
XP_009247379
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All DBs
Position
15:61087858..61092074
Genome browser
AA seq
538 aa
AA seq
DB search
MMFGGHETIEAYKDNLYRDKLSGELSVDSEVEFQLYSRIYYAQDLDYVIREEEHEAKNSG
NLESSSSKTNQKKLIVLSDSEVIQLSDGSEDITLPDEDSIYRCKGKNVRAQAQENTHGPS
AFLQSNELVDKKCKSDIEXRSGVIXEVMIIEVSSSAKEESTISEGDNVESWMLLGCEVDD
KDDDILLNLLGCKNSVTEGEDGINWFISDKDIEAQIANNQSPGRWTQXYYSANENIICRN
CDKRGHLSKNCPLPXKVRHCFLCSWRGHLLYSCPALLCEYCPVPKMWDHSCLFRHSWDKQ
CDRCHMLDHYTDACTEIWRQYHLTTKPGHXKKPKTPSKPSALVYCCHCMQKAIMDTSPXX
REVYHLSPVSPFICYYDDKYEVKEREKRVKQKIKVLKRSGDIPEPSKLPYIKAANENPHH
DIKKGCASWKSNRWPQENKETQKETKNKNENXEKHRKADRHREVDEDFPWGPKTYSSPGS
LKTQKPSKPFHHSSHYHMSREDKSPKEGKKGKXKKKERCLEDDDNDNLFLIKEREKKS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttggtggccatgagactatagaagcatacaaagataatctttatcgagacaag
ttatctggtgaactgagtgttgatagtgaggtggaatttcaactctatagccgaatttat
tatgcccaagatcttgattatgtcatcagggaggaagaacatgaagcaaagaactctggg
aatttggaatcttcaagtagcaaaacaaatcagaagaagctaattgtcctttcagatagt
gaggtcatccagctgtcagatgggtcagaggacatcactttgcctgatgaagatagtatt
tatagatgtaaaggaaagaatgttagagctcaagcacaagaaaatacccatggtccttct
gctttccttcaatctaacgagctggttgataagaaatgcaagagtgatattgaangaaga
tcaggtgtaatctaagaggtcatgattatagaggtcagttcaagtgcaaaggaagagagc
accatttcagaaggtgataatgtggaaagctggatgctactgggatgtgaagtagatgat
aaagatgatgatatccttctcaaccttctgggatgtaaaaactctgttactgaaggagaa
gatggtataaactggttcatcagtgacaaagacattgaggcccagatagctaataaccaa
tcacctggaagatggacccagtgatattattcagccaatgaaaacattatctgtagaaat
tgtgacaaacgtggccatttatcaaaaaactgccccttaccatgaaaagttcgtcactgc
ttcctgtgctcctggagaggacacctcctatattcctgtccagccctgctttgcgaatac
tgtcctgtgcctaagatgtgggaccactcatgtcttttcagacattcctgggataaacag
tgtgaccgatgtcatatgctagaccactatacagatgcttgcacagaaatctggaggcaa
tatcacctaacgaccaaacccggacacntcaaaaagccaaagaccccttcaaaaccatca
gccttagtatattgctgtcactgcatgcaaaaggccattatggacacaagtccataatga
agagaagtgtaccacctgtctccagtatctccattcatctgctactatgatgacaaatat
gaagttaaggagagagaaaagagagtaaaacaaaaaataaaagtactcaagaggagtggg
gatatcccagagccatccaagctaccttacataaaagcagcaaatgagaacccccatcat
gatataaagaagggctgtgcctcatggaaaagcaacaggtggcctcaagaaaacaaagaa
acacaaaaagaaacgaagaacaagaatgaaaactgagagaagcacaggaaggctgacaga
catcgtgaagtggatgaggattttccctggggccccaaaacctactcttctcctggcagt
ttaaaaacccagaagccttccaagccctttcatcattcatcgcattaccatatgtcgaga
gaagacaagtctcccaaggagggtaagaagggcaagnagaagaaaaaggagagatgcttg
gaagatgatgacaatgataacttatttcttattaaggagagggaaaaaaagtcttaa
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