Pongo abelii (Sumatran orangutan): 100458489
Help
Entry
100458489 CDS
T01416
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X3
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100458489 (TIA1)
03041 Spliceosome [BR:
pon03041
]
100458489 (TIA1)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100458489 (TIA1)
Spliceosome [BR:
pon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100458489 (TIA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
RRM_3
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
100458489
NCBI-ProteinID:
XP_009235479
Ensembl:
ENSPPYG00000012326
UniProt:
A0A2J8XBT5
LinkDB
All DBs
Position
12:62103079..62141546
Genome browser
AA seq
386 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI
GYPQPYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQSSAPWMGPNYGV
QPPQGQNGSMLPNQPSGYRVAGYETQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagatgcccaagactctatacgtcggtaacctttccagagatgtgacagaa
gctctaattctgcaactctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatacagctggaaatgatccctattgttttgtggagtttcatgagcatcgtcatgcagct
gcagcattagctgctatgaatggacggaagataatgggtaaggaagtcaaagtgaattgg
gcaacaacccccagcagtcaaaagaaagatacaagcagtagtaccgttgtcagcacacag
cgttcacaagatcatttccatgtctttgttggtgatctcagcccagaaattacaactgaa
gatataaaagctgcttttgcaccatttggaagaatatcagatgcccgagtggtaaaagac
atggcaacaggaaagtctaagggatatggctttgtctcctttttcaacaaatgggatgct
gaaaacgccattcaacagatgggtggccagtggcttggtggaagacaaatcagaactaac
tgggcaacccgaaagcctcccgctccaaagagtacatatgagtcaaataccaaacagcta
tcatatgatgaggttgtaaatcagtctagtccaagcaactgtactgtatactgtggaggt
gttacttctgggctaacagaacaactaatgcgtcagactttttcaccctttggacaaata
atggaaattcgagtctttccagataaaggatattcatttgttcggttcaattcccatgaa
agtgcagcacatgcaattgtttctgttaatggtactaccattgaaggtcatgttgtgaaa
tgctattggggcaaagaaactcttgatatgataaatcccgtgcaacagcagaatcagatt
ggatatccccaaccttatggccagtggggccagtggtatggaaatgcacaacaaattggc
cagtatatgcctaatggttggcaagttcctgcatatggaatgtatggccaggcatggaac
cagcaaggatttaatcagacacagtcttctgcaccatggatgggaccaaattatggagtg
caaccacctcaagggcaaaatggcagcatgttgcccaatcagccttctgggtatcgagtg
gcagggtatgaaacccagtga
DBGET
integrated database retrieval system
