Pongo abelii (Sumatran orangutan): 100458732
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Entry
100458732 CDS
T01416
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon01524
Platinum drug resistance
pon03430
Mismatch repair
pon05200
Pathways in cancer
pon05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100458732 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100458732 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
100458732 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100458732 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pon03400
]
100458732 (MSH6)
DNA repair and recombination proteins [BR:
pon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100458732 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
HORMA
nSTAND_NTPase5
UPF0524
Motif
Other DBs
NCBI-GeneID:
100458732
NCBI-ProteinID:
XP_002812092
Ensembl:
ENSPPYG00000012425
LinkDB
All DBs
Position
12:complement(84721958..84747150)
Genome browser
AA seq
1362 aa
AA seq
DB search
MSRQSTLYSFFPKSPALSDANKASSRASREGGRAAAAPGASPSPGGDAAWSEAGPGPRPR
PLARSASPPKAKNLNGGLRRSAAPAAPTSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGT
FIREKGKSVRVHVQFFDDNPTRGWVSKRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQR
ADEALNKDKIKRLELAVCDEPSEPEEEEEMEVGTTYVTDKSEEDNEIESEEEVQPKTQGS
RRSSRQIKKRRVISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVAR
KRKRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDD
SSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKS
QNFDLVICYKVGKFYELYHMDALIGVTELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGY
KVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKY
LLSLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEK
GNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIGVMLPQV
LKGMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS
TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL
CAPLCNPFAINDRLDAIEDLMVVPDKISEVVELLKRLPDLERLLSKIHNVGSPLKSQNHP
DSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKNP
EGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQ
RNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANL
INAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPV
ILLPEDTRPFLELKGSRHPCITKTFFGDDFIPNDILIGCEEEEQENGKAYCVLVTGPNMG
GKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETA
SILMHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQ
NVAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHR
KAREFEKMNQSLRVFREVCLASERSTVDAEAVHKLLTLIKEL
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcaccctgtacagcttcttccccaagtctccggcgctgagtgatgcc
aacaaggcctcgtccagggcctcacgcgaaggcggccgtgccgccgctgcccccggggcc
tctccttccccaggcggggatgcggcctggagcgaggctgggcctgggcccaggcccagg
cccttggcgcgctccgcgtcgccgcccaaggcgaagaacctcaacggagggctgcggaga
tcggcagcgcctgctgcccccaccagttgtgacttctcaccaggagatttggtttgggcc
aagatggagggttacccctggtggccttgtctggtttacaaccacccgtttgatggaaca
ttcatccgcgagaaagggaaatcagtccgtgttcatgtacagttttttgatgacaaccca
acaaggggctgggttagcaaaaggcttttaaagccctatacaggttcgaaatcaaaggaa
gcccagaagggaggtcatttttacagtgcaaagcctgaaatactgagagcaatgcaacgt
gcagatgaagccttaaataaagacaagattaagaggcttgaattggcagtttgtgatgag
ccctcagagccagaagaggaagaagagatggaggtaggcacaacttatgtaacagataag
agtgaagaagataatgaaattgagagtgaagaggaagtacagcctaagacacaaggatct
aggcgaagtagccgccaaataaaaaaacgaagggtcatatcagactctgagagtgacatt
ggtggctctgatgtggaatttaagccagacactaaggaggaaggaagcagtgatgaaata
agcagtggcgtgggggatagtgagagtgaaggcctgaacagccctgtcaaagttgctcga
aagcggaagagaatggtgactggaaatggctctcttaaaaggaaaagctctaggaaggaa
acgccctcagccaccaaacaagcaactagcatttcatcagaaaccaagaatactttgaga
gctttctctgcccctcaaaattctgaatcccaagcccacgttagtggaggtggtgatgac
agtagtcgccctactgtgtggtatcatgaaaccttagaatggcttaaggaggaaaagaga
agagatgagcacaggaggaggcctgatcaccccgattttgatgcatctacactctatgtg
cctgaggatttcctcaattcctgtactcctgggatgaggaagtggtggcagattaagtct
cagaactttgatcttgtcatctgttacaaggtggggaaattttatgagctgtaccacatg
gatgctcttattggagtcactgaactggggctggtattcatgaaaggcaactgggcccat
tctggctttcctgaaattgcatttggccgttattcagattccctggtgcagaagggctat
aaagtagcacgagtggaacagactgagactccagaaatgatggaggcacgatgtagaaag
atggcacatatatccaagtatgatagagtggtgaggagggagatctgtaggatcattacc
aagggtacacagacttacagtgtgctggaaggtgatccctctgagaactacagtaagtat
cttcttagcctcaaagaaaaagaggaagattcttctggccatactcgtgcatatggtgtg
tgctttgttgatacttcactgggaaagtttttcataggtcagttttcagatgatcgccat
tgttcgagatttaggactctagtggcacactatcccccggtacaagtcttatttgaaaaa
ggaaatctctcaaaggaaactaaaacaattctaaagagttcattgtcctcttctcttcag
gaaggtctgatacctggctcccagttttgggatgcatccaaaactttgagaactctcctt
gaggaaggctattttagggaaaagctaagtgatgacattggggtgatgttaccccaggtg
cttaaaggtatgacttcagagtctgattccattgggttgacaccaggagagaaaagtgaa
ttggccctctctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcag
gagcttttatcaatggctaattttgaagaatatattcccttggattctgacacagtcagc
actacaagatctggtgctatcttcaccaaagcctatcaacgaatggtgctagatgcagtg
acattaaacaacttggagatttttctgaatggaacaaatggttctactgaaggaacccta
ctagagagggttgatacttgccatactccttttggtaaacggctcctaaagcaatggctt
tgtgccccactctgtaacccttttgctattaatgatcgtctagatgccatagaagacctc
atggttgtgcctgacaaaatctccgaagttgtagagcttctaaagaggcttccagatctt
gagagactactcagtaaaattcataatgttgggtctcccctgaagagtcagaaccaccca
gacagcagggctataatgtatgaagaaactacatacagcaaaaagaagattattgatttt
ctttctgctctggaaggattcaaagtaatgtgtaaaattatagggatcatggaagaagtc
gctgatggttttaagtctaaaatccttaagcaggtcatctctctgcagacaaaaaatcct
gaaggtcgttttcctgatttgactgtagaattgaaccgatgggatacagcctttgaccat
gaaaaggctcgaaagactggacttattactcccaaagcaggctttgactctgattatgac
caagctcttgctgacataagagaaaatgaacagagcctcctggaatacctagagaaacag
cgcaacagaattggctgtaggaccatagtctactgggggattggtaggaaccgttaccag
ttggaaattcctgagaatttcaccactcgcaatttgccagaagaatacgaattgaaatct
accaagaagggctgtaaacgatactggaccaaaactattgaaaagaagttggctaatctc
ataaatgctgaagaacggagagatgtatcattgaaggactgcatgcggcgactgttctat
aactttgataaaaattacaaggactggcagtctgctgtagagtgtattgcagtgttggat
gtcttactgtgcctggctaactatagtcgagggggtgatggtcctatgtgtcgcccagta
attctgttgccagaagatacccgccccttcttagagcttaaaggatcacgccatccttgc
attacgaagactttttttggagatgattttattcctaatgacattctaataggctgtgag
gaagaagagcaggaaaatggcaaagcctattgtgtgcttgttactggaccaaatatgggg
ggcaagtctacgcttatgagacaggctggcttattagctgtaatggcccagatgggttgt
tacgtccctgctgaagtgtgcaggctcacaccaattgatagagtgtttactagacttggt
gcctcagacagaataatgtcaggtgaaagtacattttttgttgaattaagtgaaactgcc
agcatactcatgcatgcaacagcacattctctggtgcttgtagatgaattaggaagaggt
actgcaacatttgatgggacagcaatagcaaatgcagttgttaaagaacttgctgagact
ataaaatgtcgtacattattttcaactcactaccattcattagtagaagattattctcaa
aatgttgctgtgcgcctaggacatatggcatgcatggtagaaaatgaatgtgaagacccc
agccaggagactattaccttcctctataaattcattaagggagcttgtcctaaaagctat
ggttttaatgcagcaaggcttgctaatctcccagaggaagttattcaaaagggacataga
aaagcaagagaatttgagaagatgaatcagtcactacgagtatttcgggaagtttgcctg
gctagtgaaaggtcaactgtagatgctgaagctgtccataaattgctgactttgattaag
gaattatag
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