Pongo abelii (Sumatran orangutan): 100459107
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Entry
100459107 CDS
T01416
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03013
Nucleocytoplasmic transport
pon03015
mRNA surveillance pathway
pon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100459107 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
100459107 (EIF4A3)
03015 mRNA surveillance pathway
100459107 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100459107 (EIF4A3)
03041 Spliceosome [BR:
pon03041
]
100459107 (EIF4A3)
03009 Ribosome biogenesis [BR:
pon03009
]
100459107 (EIF4A3)
03012 Translation factors [BR:
pon03012
]
100459107 (EIF4A3)
Enzymes [BR:
pon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100459107 (EIF4A3)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100459107 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
100459107 (EIF4A3)
Spliceosome [BR:
pon03041
]
Complex C
Other components
EJC/TREX
100459107 (EIF4A3)
Ribosome biogenesis [BR:
pon03009
]
Eukaryotic type
90S particles
Helicases
100459107 (EIF4A3)
Translation factors [BR:
pon03012
]
Eukaryotic type
Initiation factors
eIF-4
100459107 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
100459107
NCBI-ProteinID:
XP_002827960
Ensembl:
ENSPPYG00000008714
UniProt:
H2NUY8
LinkDB
All DBs
Position
19:complement(95591110..95603109)
Genome browser
AA seq
411 aa
AA seq
DB search
MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacggccacgatggcgacctcgggctcggcgcgaaagcggctgctcaaagag
gaagacatgactaaagtggagttcgagaccagcgaggaggtggatgtgacccccacgttc
gacaccatgggcctgcgggaggacctactgcggggcatctacgcttacggttttgaaaaa
ccatcagcaatccagcaacgagcaatcaagcagatcatcaaaggcagagatgtcattgca
cagtctcagtccggcacaggaaaaacagccaccttcagtatctcagtcctccagtgtttg
gatattcaggttcgtgaaactcaagctttgatcttggctcccacaagagagttagctgtg
cagatccagaaggggctgcttgctctcggtgactacatgaatgtccagtgccatgcctgc
attggaggcaccaatgttggtgaagacatcaggaagttggattatggacagcatgttgtt
gcgggcactccagggcgtgtttttgatatgattcgtcgcagaagcttaaggacacgtgct
atcaaaatgttggttttggatgaagctgatgaaatgttgaataaaggtttcaaagagcag
atttacgatgtatacaggtacctgcctccagccacacaggtggttctcatcagtgccacg
ctgccacacgagattctggagatgaccaacaagttcatgactgacccaatccgcatcttg
gtgaaacgtgatgaattgactctggaaggcatcaagcagtttttcgtggcagtggagagg
gaagagtggaaatttgacactctgtgtgacctctacgacacactgaccatcactcaggcg
gtcatcttctgcaacaccaaaagaaaggtggactggctgacggagaaaatgagggaagcc
aacttcaccgtgtcctccatgcatggagacatgccccagaaagagcgagagtccatcatg
aaggagttccggtcaggcgccagccgagtgcttatctctacagacgtctgggccaggggg
ttggacgtccctcaggtgtccctcatcattaactacgatctccccaataacagagaatta
tacatacacagaattgggagatcaggtcgatatggccggaagggtgtggccattaacttt
gtaaagaatgacgacatccgcatcctcagagatatcgagcagtactattccactcagatt
gatgagatgcctatgaacgttgctgatctgatctga
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integrated database retrieval system
