Pongo abelii (Sumatran orangutan): 100459202
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Entry
100459202 CDS
T01416
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100459202 (RC3H1)
04121 Ubiquitin system [BR:
pon04121
]
100459202 (RC3H1)
Transcription factors [BR:
pon03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100459202 (RC3H1)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100459202 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100459202
NCBI-ProteinID:
XP_024088000
Ensembl:
ENSPPYG00000000490
LinkDB
All DBs
Position
1:75992168..76087848
Genome browser
AA seq
1134 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSAAILPDE
GAVDLPSRKPPALPNGIVSTGNTVTQLIPRGTDPSYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPIPPRGPADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAA
PPFEPAPYQQGMYYTPPPQCVSRFVRPPPSAPEPAPPYLDHYPPYLQERVVNSQYGTQPQ
QYPPIYPSHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQIESYYP
VAPHPTQIRPSYLREPSYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHPEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQSMA
PQGAPTKSINISDYSPYGTHGGWGGSPYSPHQNIPSQGHFSERERISMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANTLAGQSQPPPPPPPKWPGMM
SSEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAEDLT
LTFSSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaacaattcggaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctaaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccctgtgaactcagcattgctgcagctcgtgggtgctcaggtccctgag
cagcagcctattactttgtgtagtggggttgaagacacaaagcattatgaggaagccaag
aaatgtgtagaagaattagcattgtacttaaaaccgctcagcagtgctagaggagtgggt
ctgaacagcactactcagagtgttctgagtcgcccaatgcagaggaagcttgtgactcta
gtccactgtcagctagtagaagaagaaggcaggattcgtgccatgagggctgctcgatct
ttaggtgaacgaacagttacagagctcattctccagcaccagaatcctcagcagctctct
tccaatctttgggcagcagtaagggctaggggatgccagttccttggaccagcaatgcag
gaggaagctttaaagttggttctgctggccttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaagattggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgttcagctcctttatagagcctcctgtttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctctgcgg
cgagaacacgactcccagatagtgcagattgctatggaagcaggcttacgaattgcacca
gaccaatggtcctctttgctttatggagaccagtctcacaaatctcatatgcagtccatt
attgacaagttgcagaccccagcctcttttgcacagagtgttcaggaactaacaattgct
ctccagcggactggagacccagcaaacttgaaccgactaagaccccatttggagctgtta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctggaaaatggg
ctagttgctgtgcgtacagtggtacatgggctggttgattatatccagaaccacagcaaa
aaaggagcagatcagcagcagcctccacagcatagcaaatacaaaacttacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcacag
gaggaactggaaaaatttcgtaaaatgaacaagcgcctggttccgagaagacccttgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcagcagctatccttccagatgaa
ggtgcagtggatctccctagcagaaaacctcctgctctgccaaatggaattgtatcaaca
gggaatacagtaacacagcttattccacgagggacagaccccagctatgattctagtctg
aaaccaggaaaaatagatcatctgagcagtagtgctcctggatcccctcctgacctgcta
gaatctgttcctaagagtatttctgccttacctgtgaatccacatcctatacctccaagg
gggccagcagatctgcctccaatgcctgttaccaaaccacttcagatggtacctcgaggt
tctcagttatatccagcacaacagacggatgtttattatcaggatcctcgaggagcggct
ccaccatttgaaccagcaccttatcagcagggtatgtattatactccaccaccacaatgt
gtgtcccgctttgtccgacctccaccatctgctcctgaacctgctcctccctacttggat
cattatccaccctacctccaagaacgtgttgtaaactctcagtatggcacacagccacag
cagtacccacctatatacccatctcactatgatggccgtcgagtgtaccctgctcagtct
tacacgagagaagagatattccgagaaagccctatacccattgagattccacctgcagca
gtaccatcgtatgtaccagaatccagagaaagataccaacagatcgagagttactatcca
gtggctcctcatccaactcagatcagaccttcgtacctcagagaaccttcttatagccgg
cttcctcctcctccccagcctcatcctagtctagatgaactacatcgccgacgaaaggaa
ataatggcccagctagaggaaagaaaggttatctctcctcctccttttgcaccttcacca
accttgcctcctacctttcatccggaagaatttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattatagccagtactctccctggtcatgtgacaccatcggctcc
tacattggaaccaaagatgcaaaacccaaagatgttgtggcagcagggagtgtggaaatg
atgaatgtggagagtaaaggaatgagggaccagcgattagatcttcagagaagagcagca
gaaaccagtgatgatgacctcatcccatttggagaccgaccaacagtgtctcggtttggt
gccatctcacgaacttccaaaactatatatcagggtgctggtccaatgcagtctatggca
cctcagggagctcctacaaagtctattaacatttcagattatagtccatatggaacccat
ggtggctggggaggttctccatattcacctcatcaaaacataccttctcagggacacttc
agtgagagggagagaatatctatgtcagaagtggccagtcatggaaaaccccttccatct
gctgagagagaacagctacgactagaattgcagcaattgaaccatcagattagccagcag
acccagctacgtggactagaggctgttagtaacaggctggtgttgcagagggaggcaaac
accctggcaggccagtcacagcccccgccaccaccacctccaaaatggcctgggatgatg
tcaagtgagcagttgagcttggaactgcaccaggtggaaagggaaatcgggaagagaaca
cgggaactgagtatggaaaaccagtgttctctggacatgaaaagcaaactgaatacaagt
aaacaagcagaaaatggacaaccagaaccacaaaacaaggttccggctgaggaccttaca
ttgacattcagcagtgatgtaccaaatggatcagccttgacacaagagaatatcagcctc
ctatcaaacaagaccagctctctgaacctgtcagaggaccctgagggaggaggggataat
aatgactcccagagatcaggagttactcccagttctgctccttaa
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integrated database retrieval system
