Pongo abelii (Sumatran orangutan): 100460525
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Entry
100460525 CDS
T01416
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03440
Homologous recombination
pon03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100460525 (BRIP1)
03460 Fanconi anemia pathway
100460525 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pon03400
]
100460525 (BRIP1)
Enzymes [BR:
pon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100460525 (BRIP1)
DNA repair and recombination proteins [BR:
pon03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
100460525 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
100460525 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
CedA
DUF4769
Motif
Other DBs
NCBI-GeneID:
100460525
NCBI-ProteinID:
XP_024091388
Ensembl:
ENSPPYG00000008802
LinkDB
All DBs
Position
19:complement(55312963..55495178)
Genome browser
AA seq
1248 aa
AA seq
DB search
MSSVWSEYTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSGKPADEDVSEKAEVPSSCCCTCHSKDFTNNDMNQGTSRHFNYPSTPPSERNG
TSSTCQDSPEKTTLAAKLSAKKQASVYRNENDDFQVEKKRIRPLETTQQIRKRHCFGTEV
HNLDAKVDSGKTVKLNSPLGKINSFLPQKTPGHCSRCCCSTKQGNSQESSNTIKKDHTGK
SKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEAVGNFNRNEKCME
LLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKKIKACPYYTARELIQ
DADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARD
ELDSMVNNNIRKKDHEPLRAVCYSLINWLEANSEYLVERDYESACKIWSGNEMLLTLHKM
GITTATFPILQGHFSAVLQKEEKILPIYGKEETREVPVISASTQIMLKGLFMVLDYLFRQ
NSRFADDYKIAIQQTYSWTNQIDISDKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAF
SDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIKNSQVWVGTIGSGPKGRNL
CATFQNTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELV
KTVIVEPQGGEKTNFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVI
TIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHRNDWG
ALILVDDRFRNNPGRYISGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVLNVSIKDRT
NIQDNESTLEVTSLKYGTPPYLLEAASHLSPENFVEDEAKMCVQELQCPKIITKNSPLPS
GIISRKEKNDPVFLEEAGKAEKIVISRSTSPTFNKQTKRVSWSSFNSLGQYFTGKIPKAT
PELRSSENSASSPPRFKTEKMESKTVLPFTDKCESSNLTVNTSFGSCPQSETIISSLKID
ATLSRKNHSEHPLCSEEALDPDIELSLVSEDQQSTSNRDFETEAEDESIYFTPELYDPED
TDEEKNDLAETDRGNRLANNSDCILAKDLFEIRTTKEVDSAREVKAEDCTDTKLNGILHI
EESKIDDIDGNVKTTWINELELGKTHEIEIKNFKPSPSKNKGMFPGFK
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtgtggtctgaatatacaattggcggggtgaagatttactttccttataaa
gcttacccgtcacagcttgctatgatgaattctattctcagaggattaaacagtaagcaa
cattgtttgttggagagtcccacaggaagtggaaaaagcttagccttactttgttctgct
ttagcatggcagcaatctcttagtggaaagccagcagatgaggatgtaagcgaaaaagct
gaagtaccatcgtcatgttgttgtacatgccattcaaaggattttacaaacaatgacatg
aaccaaggaacttcacgtcatttcaactatccaagcacaccaccttctgaaagaaatggc
acttcatcaacttgtcaagactcccctgaaaaaaccactctggctgcaaagttatctgct
aagaaacaggcatctgtatacagaaatgaaaatgatgattttcaagtagagaagaaaaga
attcgacccttagaaactacacagcagattagaaaacgtcattgctttggaacagaagta
cacaatttggatgcaaaagttgattcaggaaagactgtaaaactcaactctccgctggga
aagataaactcctttttgccacagaaaacccctggccactgttctaggtgctgttgttct
actaaacaaggaaacagtcaagagtcatcgaataccattaagaaggatcatacagggaaa
tccaagatacccaaaatatattttgggacacgcacacacaagcagattgctcagattact
agagagctccggaggacggcatattcaggggtcccaatgactattctttccagcagggat
catacttgtgtccatcctgaggcagtcggtaacttcaacagaaatgagaagtgcatggaa
ttgctagatgggaaaaacggaaaatcctgctatttttatcatggagttcataaaattagt
gatcagcacacattacagactttccaagggatgtgcaaagcctgggatatagaagaactt
gtcagcctggggaagaaaataaaggcctgtccatattacacagcccgagaactaatacaa
gatgctgacatcatattttgtccctacaactatcttctagatgcacaaataagggaaagt
atggatttaaatctgaaagaacaggttgtcattttagatgaagctcataacatcgaggac
tgtgctcgggaatcagcaagttacagtgtaacagaagttcagcttcggtttgctcgggat
gaactagatagtatggtcaacaataatataaggaagaaagatcatgaacccctacgagct
gtgtgctatagcctcattaattggttagaagcaaactctgaatatcttgtagaaagagat
tatgaatcagcttgtaaaatatggagtggaaatgaaatgctcttaactttacacaaaatg
ggcatcaccactgctacttttcccattttgcagggacatttttctgctgttcttcaaaaa
gaggaaaaaatcttaccaatttatggtaaagaggagacaagagaagtacctgttattagt
gcatcaactcaaataatgcttaaaggactttttatggtacttgactatctttttaggcaa
aatagcagatttgcagatgattataaaattgcaattcaacagacttactcctggacaaat
cagattgatatttcagacaaaaatgggttgttggttctaccaaaaaataagaaacgttca
cgacagaaaactgcagttcatgtgctaaacttttggtgcttaaatccagctgtggccttt
tcagatattaatggcaaagttcagactattgttttgacatctggtacattatcaccaatg
aaatccttttcatcagaacttggtgttacatttactatccagctggaggctaatcatgtc
attaaaaattcacaggtttgggttggtaccattgggtcaggccccaagggtcggaatctc
tgtgctaccttccagaatactgaaacatttgagttccaagatgaagtgggagcacttttg
ttatctgtgtgccagactgtgagccaaggaattttgtgtttcttgccatcttacaagtta
ttagaaaaattaaaagaacgttggctctctactggtttatggcataatctggagttggtg
aagacagtcattgtagaaccacagggaggagaaaaaacgaattttgatgaattactgcag
gtgtactatgatgcaatcaaatacaaaggagagaaagatggagctctcctggtagcagtt
tgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgctgtcata
acaataggaattccttttccaaatgtgaaagatctacaggttgaactaaaacgacaatac
aatgaccaccattcaaaattgagaggtcttctacctggccgtcagtggtatgaaattcaa
gcatacagggccttaaaccaggcccttggtagatgtattcgacacagaaatgattgggga
gctcttattctagtggatgatcgctttaggaataacccaggtcgctatatatctggactt
tctaaatgggtacggcagcagattcagcaccattcaacctttgaaagtgcactggagtcc
ttggctgaattttccaaaaagcatcaaaaagttcttaatgtatccataaaggacaggacc
aatatacaggacaatgagtctacacttgaagtgacctctttaaagtacggtaccccacct
tatttactggaagcagcaagtcatctatcaccagaaaattttgtggaagatgaagcaaag
atgtgtgtccaggaactacagtgtcctaaaattattaccaaaaattcacctctaccaagt
ggcattatctccagaaaggagaaaaatgatccagtattcctggaagaagcagggaaagca
gaaaaaattgtgatttccagatccacaagcccaactttcaacaaacaaacaaagagagtt
agctggtcaagctttaattctttgggacagtattttactggtaaaataccgaaggcaaca
cctgagctcaggtcatcagagaatagtgcctctagtcctccccgtttcaaaacagaaaag
atggaaagtaaaactgttttgcccttcactgataaatgtgaatcctcaaatcttacagta
aacacatcatttggatcatgccctcaatcagaaaccattatttcatcattaaagattgat
gccacccttagtagaaaaaatcattctgaacatccgctctgttctgaagaagccctggat
ccagacattgaattgtctctagtaagtgaagatcaacagtccacttcaaatagagatttt
gaaacagaagcagaagatgaatctatctattttacacctgaactttatgatcctgaagat
acagatgaagaaaaaaatgacttagccgaaactgatagaggaaatagattggctaacaat
tcagattgcattttagctaaagacctttttgaaattagaactacaaaagaagtagattca
gccagagaagtgaaagctgaggattgcacagatacaaagttgaatggaattctgcatatt
gaagaaagtaaaattgatgacattgatggtaatgtaaaaacaacttggataaatgaactg
gaactgggaaaaactcatgaaatagaaataaagaactttaaaccatctccttccaaaaat
aaaggcatgtttcctggttttaagtaa
DBGET
integrated database retrieval system
