Pongo abelii (Sumatran orangutan): 100460541
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Entry
100460541 CDS
T01416
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X10
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100460541 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pon04131
]
100460541 (VTI1A)
Membrane trafficking [BR:
pon04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
100460541 (VTI1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Laminin_II
Sec20
DUF6987
Mer2
MMPL
DUF1664
Fusion_gly
Cir_Bir_Yir
HAAS
BPS1
FapA
Motif
Other DBs
NCBI-GeneID:
100460541
NCBI-ProteinID:
XP_002821193
Ensembl:
ENSPPYG00000035601
UniProt:
A0A6D2XPN0
LinkDB
All DBs
Position
8:119487928..119866629
Genome browser
AA seq
217 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITSKIARVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR
DIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGNSSENQRAHLLD
NTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKMQRARERLRETDANLGKSSRI
LTGMLRRIIQNRILLVILGIIVVITILMAITFSVRRH
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgacttcgaaggttacgagcaggacttcgcggtgctcactgcagagatcact
agcaagattgcgagggtcccacgactcccgcctgatgaaaagaaacagatggttgcaaat
gtggagaaacagcttgaagaagcgaaagaactgcttgaacagatggatttggaagtccga
gacataccaccccaaagtcgagggatgtacagcaacagaatgagaagctacaaacaagaa
atgggaaaactcgaaacagattttaaaaggtcacggatcgcctacagtgacgaagtacgg
aatgagctcctgggggatgatgggaattcctcagagaaccagagggcacatctgctcgat
aacacagagaggctggaaaggtcatctcggagactagaggctggataccaaatagcagtg
gaaaccgagcaaattggtcaggagatgttggaaaaccttagtcatgacagagaaaagatg
cagcgagcacgtgaaagacttcgggaaacagatgctaatttgggaaaaagttccaggatt
ctcacggggatgttgcgaagaatcatccagaaccgcatcctgctcgtcatcctagggatc
atcgtggtcatcaccatcctgatggcgatcactttttctgtcagaagacactga
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