Pongo abelii (Sumatran orangutan): 100460600
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Entry
100460600 CDS
T01416
Symbol
U2AF2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100460600 (U2AF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pon03041
]
100460600 (U2AF2)
Spliceosome [BR:
pon03041
]
Complex A
U2 snRNP components
U2 related factors
100460600 (U2AF2)
Complex B
100460600 (U2AF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
DUF8489
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
100460600
NCBI-ProteinID:
XP_024092735
Ensembl:
ENSPPYG00000010429
LinkDB
All DBs
Position
20:62167073..62186322
Genome browser
AA seq
475 aa
AA seq
DB search
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRR
RSKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPATA
LLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQ
APGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE
NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK
GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSPPSTINQTPVTLQV
PGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP
VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDFW
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgagttcgagcggcagctcaacgagaataaacaagagcgggacaag
gagaaccggcataggaagcgcagccacagccgctctcgaagccgggaccgcaaacgccgg
agccggagccgcgaccggcgcaaccgggaccagcggagcgcctcccgggacaggcgacga
cgaagcaaacctttgaccagaggcgctaaagaggagcacggtggactgattcgttccccc
cgccatgagaagaagaagaaggtccgtaaatactgggacgtgccaccaccaggcttcgag
cacatcaccccaatgcagtacaaggccatgcaagctgcgggtcagattccagccactgct
cttctccccaccatgacccctgacggtctggctgtgaccccaacgccggtgcccgtggtc
gggagccagatgaccagacaagcccggcgcctctacgtgggcaacatcccctttggcatc
actgaggaggccatgatggatttcttcaacgcccagatgcgcctgggggggctgacccag
gcccctggcaacccagtgttggctgtgcagattaaccaggacaagaattttgcctttttg
gagttccgctcagtggatgagactacccaggccatggcctttgatggcatcatcttccag
ggccagtcactaaagatccgcaggcctcatgactaccagccgcttcctggcatgtcagag
aatccctccgtctatgtgcctggggttgtgtccactgtggtccctgactctgcccacaag
ctgttcatcgggggcttacccaactacctgaacgatgaccaggtcaaagagctgctgaca
tcctttgggcccctcaaggccttcaacctggtcaaggacagtgccacggggctctccaag
ggctacgccttctgtgagtacgtggacatcaacgtcacggatcaggccattgcggggctg
aacggcatgcagctgggggataagaagctgctggtccagagggcgagtgtgggagccaag
aatgccacgctggtgagccccccgagcaccatcaatcagacgcctgtgaccctgcaagtg
ccgggcttgatgagctcccaggtgcagatgggcggccacccgactgaggtcctgtgcctc
atgaacatggtgctgcctgaggagctgctggacgacgaggagtatgaggagatcgtggag
gatgtgcgggacgagtgcagcaagtacgggcttgtcaagtccatcgagatcccccggccc
gtagacggcgtcgaggtgcccggctgcggaaagatctttgtggagttcacctctgtgttt
gactgccagaaagccatgcagggcctgacgggccgcaagttcgccaacagagtggttgtc
acaaaatactgtgaccccgactcttatcaccgccgggacttctggtag
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