Pongo abelii (Sumatran orangutan): 100460719
Help
Entry
100460719 CDS
T01416
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04390
Hippo signaling pathway
pon04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100460719 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100460719 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100460719 (SOX2)
Transcription factors [BR:
pon03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100460719 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100460719
NCBI-ProteinID:
XP_002814367
Ensembl:
ENSPPYG00000014330
UniProt:
H2PC44
LinkDB
All DBs
Position
2:191733974..191737177
Genome browser
AA seq
319 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT
LMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQL
GYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALG
SMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHY
QSGPVPGTAINGTLPLSHM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggtaactccaccgcggcggcggccggcggcaaccagaagaacagcccg
gaccgcgtcaagcggcccatgaatgccttcatggtgtggtcccgcgggcagcggcgcaag
atggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgcggag
tggaaacttttgtcggagacggagaagaggccgttcatcgacgaggctaagcggctgcga
gcgctgcacatgaaggagcacccggattataaataccggccgcggcggaaaaccaagacg
ctcatgaagaaggataagtacacgctgcccggcgggctgctggcccccggcggcaacagc
atggcgagcggggtcggggtgggcgccggcctgggcgcgggcgtgaaccagcgcatggac
agttacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccagctg
ggctacccgcagcacccgggcctcaatgcgcacggcgcagcgcagatgcagcccatgcac
cgctacgacgtgagcgccctgcagtacaactccatgaccagctcgcagacctacatgaac
ggctcgccaacctacagcatgtcctactcgcagcagggcacccctggcatggctcttggc
tccatgggttcggtggtcaagtccgaggccagctccagcccccctgtggttacctcttcc
tcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatgtatctc
cccggcgccgaggtgccggaacccgccgcccccagcagacttcacatgtcccagcactac
cagagcggcccggtgcccggcacggccattaacggcacactgcccctctcacacatgtga
DBGET
integrated database retrieval system