Pongo abelii (Sumatran orangutan): 100461311
Help
Entry
100461311 CDS
T01416
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X2
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100461311 (TAF1C)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100461311 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
100461311
NCBI-ProteinID:
XP_009249268
Ensembl:
ENSPPYG00000007600
LinkDB
All DBs
Position
18:complement(83582906..83591581)
Genome browser
AA seq
844 aa
AA seq
DB search
MMDFPGSLRPALFMTGPLGLSDVPDLSFMCSWQDALTLPEAQPQNSENGALHVTKDLLWE
PATPGPLPMLPPLIDPWDPGLTARDLLFRGGYRYRRRPRVVLDVTEQISRFLWDHGDVAF
APLGKLMLENFKLEGTASRTKKKTVVSVKKLLQDLGGHQPWGCPWAYLSNRQRRFSILGG
PILGTSVASHLAELLHEELVLRWEQLLLDEACTGGALAWVPGRTPQFGQLVYPAGGALDR
LHFQEVVLTPGDSPQFLGNPGRIQLQGPVRQVVTCTVQGETLLAVRSDYHCAVWKFGKQW
QPTLLQAMQVEKGATGISLSPHLPGELAICSRSGAVCLWSPEDGLQQIYKDPETLVFRES
SSWRWADFTAHPRLLTVGDRTGVKMLDTQGPPGCGLLLFRLGAEASCQKGERVLLTQYLG
HSSPKCLPPTLHLVCTQFSLYLVDERLPLVPMLKWNHGLPSPLLLARLLPPPRPSCVQPL
LLGGQGGQLQLLHLAGEGASVPRLAGPPQSLPSRTDSLPAFPLLEPKIQWRLQERLKAPT
IGLAAVVPPLPSAPTPGLVLFQLSAAGDVFYQQLRPQVDSSLRRDAGPPGDTQPDCHAPT
ASWTSQDTAGCSQWLKALLKVPLAPPVWTAPTFTHRQLLGSRELRREEEEGQRLGVLRKA
MAQGRLLLQRDLGSLPAAEPPPAPESGPEDKLSERLGEAWAGRGAAWWERQQGRTSEPGR
QTRRPKRRTQLSSSFSLSGHVDPSEDTSPRHSPEWPPADALPLPPVTPPSQELTPDVCTQ
GVPSGRRQMLRDYMAKLPPQRDTPGCAATPPSSQASSIRATRSQQHTPVLSGSQPLRKKP
RMGF
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgatggacttccccggctccctccgccctgcgttgtttatgaccggccctcttggtctg
agtgacgtccctgacctctctttcatgtgcagctggcaagatgcgctgaccctgccagag
gcccagccccagaactcagagaatggggcactgcatgtgaccaaggacctgctgtgggag
ccggcaacccctgggcctctccccatgctgcctcccctcattgatccctgggaccctggc
ctgactgcccgggacctgcttttccgcggagggtaccggtatcggaggcggccccgagtc
gtgctggatgttactgagcagatcagccggttcctctgggatcatggagacgtagccttt
gcgcccctggggaagctgatgctggagaatttcaagctggagggaacagcgagccgcact
aagaagaagacagtggtcagtgtgaagaagctgctccaggacctcggtggacaccagccc
tgggggtgtccctgggcttacctcagcaaccgacagcgccgcttctctatcctcgggggc
cccatcctgggcacatcggtggcgagccacttggcagagctgctgcacgaggagctggtg
ctgcggtgggagcagctgcttctggatgaggcctgcactgggggcgcgctagcctgggtg
cctggaaggacaccccagttcgggcagctggtctaccctgctggaggcgccctggacagg
ctgcatttccaagaggtcgttctgaccccaggtgacagtccccaattccttgggaaccct
ggacgcatccagctccagggacctgtccggcaggtggtgacatgcaccgtccagggagaa
actctgctggccgtccgctctgactaccactgtgccgtgtggaagtttggtaaacagtgg
cagccaacccttctgcaggcaatgcaggtggagaaaggggccacagggatcagcctcagc
cctcacctgcctggggagctggccatctgcagccgctcaggagccgtctgcctgtggagc
cctgaggatgggctgcagcaaatctacaaggaccctgagacccttgtgttccgggagtcc
tcttcatggcgttgggcagacttcactgcccaccctcggctgctgaccgttggtgaccgc
actggagtgaagatgcttgacactcagggcccgccaggctgtggtctgttgctttttcgt
ttgggggcagaggcttcgtgccagaaaggggaacgtgtcctgctcacccagtacctgggg
cactccagccccaaatgcctcccccctactctccatctcgtctgtacccagttctccctc
tacctagtggacgagcgccttcccctggtgccgatgctgaagtggaaccatggcctcccc
tccccgctcctgctggcccgactgctgcctccaccccggcccagctgcgtgcagcccctg
ctcctcggaggccagggtgggcagctgcagctgctgcacctggcaggagaaggggcgtcg
gtgccccgcctggcaggccccccccagtctcttccttccagaaccgactccctccctgca
tttcctctgctggagcctaagatccagtggcggctgcaggagcgcctgaaagcaccgacc
ataggtctggctgccgtcgtcccgcccttgccctcggcgcccacaccgggcctggtgctc
ttccagctctcggcggcgggagatgtcttctaccagcagctccgcccccaggtggactcc
agcctccgcagagatgcagggcctcccggtgacacccaacctgactgccatgcccccaca
gcttcctggacctcccaggacactgccggctgcagccagtggctgaaggccctgctaaaa
gtgcccctggctcctcctgtgtggacagcacccaccttcacccaccgccagctgctgggc
agcagagagctgcggagggaggaagaggaagggcagcggctgggtgtgctccgcaaggcc
atggcccaagggcggctcctgctgcagagagacctgggctccctccctgcagcagagcca
ccccctgcacccgagtcaggcccagaggacaagctcagtgagcgcctgggggaagcctgg
gcaggccgaggggctgcctggtgggagaggcagcagggcaggacctcggagcccgggaga
cagaccaggcggcccaagcgccggacccagctgtccagcagcttttcgctcagtggccat
gtggacccctcagaggacaccagcccccgtcacagccctgagtggccacctgccgatgct
ctgcccctcccccccgtgaccccgccctcccaggagttgactccggatgtgtgcacccag
ggcgtcccatcagggcggcggcagatgctccgtgactacatggccaagctaccaccccaa
agggacaccccaggctgtgccgccacacccccttcctcccaggcctccagcatccgggcc
actcgctcccagcagcacacacccgtcctctctggctctcagcccctccggaagaagcct
cggatgggcttctga
DBGET
integrated database retrieval system
