Pongo abelii (Sumatran orangutan): 100462160
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Entry
100462160 CDS
T01416
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100462160 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pon03036
]
100462160 (DICER1)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100462160 (DICER1)
microRNA pathway
RISC loading complex
100462160 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
100462160
NCBI-ProteinID:
XP_009247731
Ensembl:
ENSPPYG00000006112
UniProt:
A0A6D2VSB6
LinkDB
All DBs
Position
15:complement(99488851..99560617)
Genome browser
AA seq
1922 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVNASWTKERWNQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDDYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD
IDPVMDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV
GVRSLPADFRYPNLDFGWKKSIDSKSFISISNSSSAENDNYCKHSTIVPENAAHQGANRT
SSLENHDQMSVNCRTLLSESPGKLHVEVSADLTAINGLSYNQNLANGSYDLANRDFCQGN
QQNYYKQEIPVQPATSYSIQNLYSYENQPQPSDECTLLSNKYLDGNANKSTSDGSPVMAV
MPGTTDAIQVLKGRMDSEQSPSIGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLDEDYEEEDEEEESLMWRAPKEEADYED
DFLEYDQEHIRFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMPFSSDFED
FDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIA
DCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVS
CAAASVASSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNK
AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV
NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEE
DIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEM
EPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVP
NS
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataatacc
atcgtctgtttaaacactggctcagggaagacatttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagacttcagcagaaatggaaaaaggacggtgttcttggtc
aactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcattcagatctcaag
gttggggaatactcaaacctagaagtaaatgcatcttggacaaaagagagatggaaccaa
gagtttactaagcaccaggttctcattatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
atcctagaccacccctatcgagaaattatgaagctctgtgaaaattgtccatcatgtcct
cgcattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattggaa
gaaaagattcagaaactagagaaaattcttaagagtaatgctgaaactgcaactgacctg
gtggtcttagacaggtatacttctcagccatgtgagattgtggtggattgtggaccattt
actgacagaagtgggctttatgaaagactgctgatggaattagaagaagcacttaatttt
atcaatgattgtaatatatctgtacattcaaaagaaagagattctactttaatttcgaaa
cagatactatcagactgtcgtgccgtattggtagttctgggaccctggtgtgcagataaa
gtagctggaatgatggtaagagaactacagaaatacatcaaacatgagcaagaggagctg
cacaggaaatttttattgtttacagacactttcctaaggaaaatacatgcactatgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaactcctaaagtcatcaaactg
ctcgaaatattacgcaaatataaaccatatgagcgacagcagtttgaaagcgttgagtgg
tataataatagaaatcaggatgattatgtgtcatggagtgattctgaggatgatgatgag
gatgaagaaattgaagaaaaagagaagccagagacaaattttccttctccttttaccaac
attttgtgtggaattatttttgtggaaagaagatacacagcagttgtcttaaacagattg
ataaaggaagctggcaaacaagatccagagctggcttatatcagtagcaattttataact
ggacatggcattgggaagaatcagcctcgcaacaaacagatggaagcagaattcagaaaa
caggaagaggtacttaggaaatttcgagcacatgagaccaacctgcttattgcaacaagt
attgtagaagagggtgttgatataccaaaatgcaacttggtggttcgttttgatttgccc
acagaatatcgatcctatgttcaatctaaaggaagagcaagggcacccatctctaattat
ataatgttagcggatacagacaaaataaaaagttttgaagaagaccttaaaacctacaaa
gctattgaaaagatcttgagaaacaagtgttccaagtcggttgatactggtgagactgac
attgatcctgtcatggatgatgatgacgttttcccaccatatgtgttgaggcctgacgat
ggtggtccacgagtcacaatcaacacggccattggacacatcaatagatactgtgctaga
ttaccaagtgatccgtttactcatctagctcctaaatgcagaacccgagagttgcctgat
ggtacattttattcaactctttacctgccaattaactcacctcttcgagcctccattgtt
ggtccaccaatgagctgtgtacgattggctgaaagagttgtagctctcatttgctgtgag
aaactgcacaaaattggtgaactggatgaccatttgatgccagttgggaaagagactgtt
aaatatgaagaagagcttgatttgcatgatgaagaagagaccagtgttccgggaagacca
ggttccacgaaacgaaggcagtgctatccaaaagcaattccagagtgtttgagggatagt
tatcccagacctgatcagccctgttacctgtatgtgataggaatggttttaactacacct
ttacctgatgaactcaactttagaaggcggaagctctatcctcctgaagataccacaaga
tgctttggaatactgacagccaaacccatacctcagattccacactttcctgtgtacaca
cgctctggagaggttaccatatccattgagttgaagaagtctggtttcatgttgtctcta
caaatgcttgagttgattacaagacttcaccagtatatattctcacatattcttcggctt
gaaaaacctgcactagaatttaaacctacagacgctgattcagcatactgtgttctacct
cttaatgttgttaatgactccagcactttggatattgactttaaattcatggaagatatt
gagaagtctgaagctcgcataggcattcccagtacaaagtatacaaaagaaacacccttt
gtttttaaattagaagattaccaagatgctgttatcattccaagatatcgcaattttgat
cagcctcatcgattttatgtagctgatgtgtacactgatcttaccccactcagtaaattt
ccttcccctgagtatgaaacttttgcagaatattataaaacaaagtacaaccttgaccta
accaatctcaaccagccactgctggatgtggaccacacatcttcaagacttaatcttttg
acacctcgacatttgaatcagaaggggaaagctcttcctttaagcagtgctgagaagagg
aaagccaaatgggaaagtctgcagaataaacagatactggttccagaactctgtgctata
catccgattccagcatcactgtggagaaaagctgtttgtctccccagcatactttatcgc
cttcactgccttttgactgcagaggagctaagagcccagactgccagcgatgctggcgtg
ggagtcagatcacttcctgcggattttagataccctaacttagacttcgggtggaaaaaa
tctattgacagcaaatctttcatctcaatttctaactcctcttcagctgaaaatgataat
tactgtaagcacagcacaattgtccctgaaaatgctgcacatcaaggtgctaatagaacc
tcctctctagaaaatcatgaccaaatgtctgtgaactgcagaacgttgctcagcgagtcc
cctggtaagctccacgttgaagtttcagcagatcttacagcaattaatggtctttcttac
aatcaaaatctcgccaatggcagttatgatttagctaacagagacttttgccaaggaaat
cagcagaattactacaagcaggaaatacccgtgcaaccagctacctcatattccattcag
aatttatacagttacgagaaccagccccagcccagcgatgaatgtactctcctgagtaat
aaataccttgatggaaatgctaacaaatctacctcagatggaagtcctgtgatggccgta
atgcctggtacgacagacgctattcaagtgctcaagggcaggatggattctgagcagagc
ccttctattgggtactcctcaaggactcttggccccaatcctggacttattcttcaggct
ttgactctgtcaaacgctagtgatggatttaacctggagcggcttgaaatgcttggcgac
tcctttttaaagcatgccatcaccacgtatctattttgcacttaccctgatgctcatgag
ggccgcctttcgtatatgagaagcaaaaaggtcagcaactgtaatctgtatcgccttgga
aaaaagaagggactacccagccgcatggtggtgtcaatatttgatccccctgtgaattgg
cttcctcctggttatgtagtaaatcaagacaaaagcaacacagataaatgggaaaaagat
gaaatgacaaaagactgcatgctggcgaatggcaaactggatgaggattacgaggaggag
gatgaggaggaggagagcctgatgtggagggctccgaaggaagaggctgactatgaagat
gatttcctggagtatgatcaggaacatatcagatttatagataatatgttaatggggtca
ggagcttttgtaaagaaaatctctctttctcctttttcaaccactgattctgcatatgaa
tggaaaatgcccaaaaaatcctccttaggtagtatgccattttcatcagattttgaggat
tttgactacagctcttgggatgcaatgtgctatctggatcctagcaaagctgttgaagaa
gatgactttgtggtggggttctggaatccatcagaagaaaactgtggtgttgacacggga
aagcagtccatttcttacgacttgcacactgagcagtgtattgctgacaaaagcatagcg
gactgtgtggaagccctgctgggctgctatttaaccagctgtggggagagggctgctcag
cttttcctctgttcattggggctgaaggtgctcccggtaattaaaaggactgatcgggaa
aaggccctgtgccctactcgggagaatttcaacagccaacaaaagaacctttcagtgagc
tgtgctgctgcttctgtggccagttcacgctcttctgtattgaaagacttggaatatggt
tgtttgaagattccaccaagatgtatgtttgatcatccagatgcagataaaacactgaat
caccttatatcggggtttgaaaattttgaaaagaaaatcaactacagattcaagaataag
gcttaccttctccaggcttttacacatgcctcctaccactacaatactatcactgattgt
taccagcgcttagaattcctgggagatgcgattttggactacctcataaccaagcacctt
tatgaagacccgcggcagcactccccgggggtcctgacagacctgcggtctgccctggtc
aacaacaccatctttgcatcgctggctgtaaagtacgactaccacaagtacttcaaagct
gtctctcctgagctcttccatgtcattgatgactttgtgcagtttcagcttgagaagaat
gaaatgcaaggaatggattctgagcttaggagatctgaggaggatgaagagaaagaagag
gatattgaagttccaaaggccatgggggatatttttgagtcgcttgctggtgccatttac
atggatagtgggatgtcactggagacagtctggcaggtgtactatcccatgatgcggccg
ctaatagaaaagttttctgcaaatgtaccccgttcgcctgtgcgagaattgcttgaaatg
gaaccagaaactgccaaatttagcccggccgagagaacttacgacgggaaggtcagagtc
accgtggaagtggtaggaaaggggaagtttaaaggtgttggtcgaagttacaggatcgcc
aaatctgcagcggcaagaagagccctccgaagcctcaaagctaatcaacctcaggttccc
aatagctga
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integrated database retrieval system
