Pongo abelii (Sumatran orangutan): 100462170
Help
Entry
100462170 CDS
T01416
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100462170 (SUPT6H)
03036 Chromosome and associated proteins [BR:
pon03036
]
100462170 (SUPT6H)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100462170 (SUPT6H)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100462170 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
100462170
NCBI-ProteinID:
XP_024090785
Ensembl:
ENSPPYG00000008105
UniProt:
A0A2J8TMH4
LinkDB
All DBs
Position
19:42761377..42801563
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAMEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPASSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggctgaggagtcagaggaagaatacaatgatgaaggc
gaggtggtaccccgagtcaccaagaaatttgtggaagaggaggatgatgatgaggaggag
gaggaggagaacctagatgatcaggatgagcaaggcaacctgaaaggctttatcaatgac
gatgatgatgaagatgaaggggaggaggatgagggcagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacctcttttgatgaccgcctggaggatgatgat
tttgacctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaagtaccggcgt
gtcaaaaaaatgtcagatgacgaggacgatgacgaggaggaatatggcaaggaggaacat
gaaaaagaagcgattgcggaagaaatcttccaggatggggaaggggaagaagggcaggag
gccatggaggcccccatggctcctccggaggaggaggaagaagatgatgaggagtcagat
attgacgacttcattgtggatgatgatggacagcctctgaaaaaacctaagtggcggaaa
aagcttcctggatacacagacgcggccctgcaagaagcccaggaaatcttcggtgtggac
tttgactatgatgaatttgagaaatacaatgagtatgatgaagaactggaggaagagtat
gagtatgaggatgatgaggctgagggtgaaatccgagtgcgccccaagaagaccaccaag
aagcgtgtgagccgtaggagcatctttgaaatgtatgagcccagtgagctagaaagcagc
cacctcacagatcaggacaatgaaatccgagccactgacctgcctgagaggttccagctc
cgctccatcccagtcaagggggctgaagatgatgaactagaagaagaagctgactggatc
tacaggaatgcttttgccacaccaaccatttctctccaggaaagctgtgattacctagac
cgagggcagccagccagcagcttcagtcggaaagggcccagcacaattcagaagatcaaa
gaggccctgggcttcatgcgaaatcagcattttgaggtgccttttattgccttctatcga
aaggagtatgtggagcctgagttgcacatcaatgacctatggagagtctggcagtgggat
gaaaagtggacccagctgcggatccgtaaagagaacctaacacggctgtttgagaagatg
caggcttatcagtatgaacagatctctgctgaccctgacaaacctcttgctgatggcatc
cgggctctggacaccactgacatggagaggctaaaggatgtccaatcaatggatgagctg
aaagatgtctacaaccattttcttctttattatggccgagacatccctaagatgcagaac
gccgccaaagctagccgcaagaagctgaagcgtgtcagggaagagggagatgaagaaggt
gaaggtgatgaggcagaagatgaggagcagagggggcccgagctcaagcaagcctctcgc
cgagacatgtacaccatctgccagagtgctgggctagatggcctggccaaaaagtttggg
cttactcccgagcagtttggggagaacctgcgggacagctaccagcggcacgagacagag
cagtttcccgcagagcccttggagctggccaaggattacgtttgcagccagttccctact
ccagaagctgtgctagaaggcgcccgctacatggtagccctgcagattgcccgtgagccc
cttgtccggcaggtgctgaggcaaaccttccaagagagagccaagctaaatataaccccc
accaagaaaggtagaaaggatgtggatgaggcccattatgcctattccttcaagtattta
aagaacaagcctgttaaggaactgagagatgaccagtttctcaagatatgcctggctgaa
gacgaagggctcctaaccattgacatcagcatagatatgaagggagtggaaggctatggc
aacgaccagacatattttgaagagataaaacagttttactaccgagatgagttcagccac
caggtgcaggagtggaaccggcagcgcaccatggccatcgaacgggctttacagcagttc
ctctatgtgcagatggccaaagaactcaagaacaagctgctggctgaagccaaggaatat
gtcataaaggcctgtagtcgaaagctctacaattggttgagagtggcaccctaccgacca
gatcagcaggtggaagaagatgacgactttatggacgagaaccaagggaagggcattcga
gtcctcggcattgctttctcctctgccagagatcaccctgtgttctgcgccctggtcaat
ggtgaaggagaagtgacagacttccttcgactgccccattttaccaaacggcgaactgca
tggagagaggaagagcgggaaaagaaggctcaagacattgaaacgctaaagaaatttctc
ctgaataagaagcctcatgtggtgacagttgcaggagagaacagggacgcccagatgttg
attgaagatgtgaagcgcattgtacatgagctggaccagggccagcagctgtcatctatt
ggggtagagctggttgacaacgagttggccattctctatatgaacagcaagaagtcagag
gcagagttccgggattaccctccggtgctgagacaggccgtctccctggcccggcgcatc
caggaccctctgattgaatttgcccaggtgtgcagttccgatgaagacatcctgtgtctc
aagtttcaccccttgcaggagcatgtggtgaaagaggagctgctcaacgccttgtactgt
gaatttatcaaccgagtcaatgaggtcggggtcgatgtcaaccgtgccattgcccaccct
tacagccaggccttgatccagtatgtttgtggcctgggacctcggaaagggacccacctc
ctgaagatcctgaagcagaacaacacccggctcgagagccggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacacggcc
tccctgggggacagcactgactcatatattgaagtccttgatggctcccgtgtccaccct
gagacttatgagtgggctaggaagatggcagtggatgccctggaatacgatgaatcagcc
gaggatgccaatcctgcaggagcccttgaagaaatcttggaaaacccagaacgactcaaa
gacctggaccttgatgcctttgcagaagagctggagaggcagggctatggtgacaaacac
atcacactctatgacatccgggcagagctgagctgtcgatataaggacctccggacagcc
taccgctctcccaacacagaggagatcttcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaagctcatcatctgcaatgtcactggcatcgcccacaggcgtccccag
ggtgagagctatgaccaggcgatccgcaatgatgagacagggctgtggcagtgccccttc
tgtcagcaggacaatttccctgaactaagcgaggtgtggaaccactttgatagcggttcg
tgcccaggccaggccatcggtgtcaaaacacggctagacaatggtgtcaccggcttcatc
cccaccaaattcctcagtgacaaagtggtaaagcggccggaagaacgagtgaaggtggga
atgactgttcactgccgcatcatgaagattgacattgagaagttcagtgcagacctgacc
tgccgcacatcagacctcatggacaggaacaatgagtggaagctgcccaaagacacctac
tatgactttgatgctgaagctgcagaccacaagcaggaggaggacatgaagcggaagcag
cagcggaccacatacatcaagagagtgatcgcacacccatccttccataatatcaatttc
aagcaagcagaaaagatgatggagaccatggaccagggtgatgtgattatccgaccaagc
agcaagggcgagaaccacctgacagtgacctggaaagtcagtgatggcatctaccagcat
gtggatgtgcgggaggagggcaaggaaaatgccttcagcctgggagccactctgtggatc
aacagtgaggaattcgaagatttggatgagattgttgctcgctatgtccagcccatggca
tccttcgcccgggatcttctgaatcacaagtattatcaggactgcagcggtggggaccgc
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatatgtaacagtgactccagagggattccggtaccggggccagatc
ttcccaaccgtgaatggactgtttagatggtttaaggatcactaccaggatcctgtacca
ggcatcacccctagcagcagcagcaggacccggacacctgcctctatcaatgctacccca
gccaacatcaaccttgcagatctgacacgggctgtgaatgccctgcctcagaacatgact
tcacagatgttcagtgccattgctgcggtgacaggccaaggacagaaccctaatgccacc
ccagcccagtgggcctcaagccagtatggctatggcggcagtggaggcggcagcagtgct
taccacgtattcccaacgccagcccagcagccagtggccacaccattaatgacccctagc
tactcctacacgaccccaagccagcccatcaccacccctcagtaccaccagctccaggcc
agcaccaccccgcagtcggcccaggcccagccccagccctcctccagctcccggcaacgg
cagcagcagccaaagtccaacagccatgcagccatcgactgggggaaaatggcggagcag
tggctgcaagaaaaggaggcagaacggcggaaacagaagcagcggctgacacctcggccc
tcccccagccccatgatcgaaagcacccccatgtccattgctggcgatgccaccccactc
ctggacgagatggatcggtag
DBGET
integrated database retrieval system
