Entry |
|
Symbol |
EXOSC5
|
Name |
(RefSeq) exosome complex component RRP46
|
KO |
K12590 | exosome complex component RRP46 |
|
Organism |
pon Pongo abelii (Sumatran orangutan)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pon00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100462188 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pon03019]
100462188 (EXOSC5)
Messenger RNA biogenesis [BR:pon03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100462188 (EXOSC5)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
20:complement(47149995..47161443)
|
AA seq |
235 aa
MEEEMHTDAKIRAETGTGSSPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGTLHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLMLDPTSKQEKEARAV
LTFALDSVERKLLMSSTKGLYSDTELQQCLAAAQAASQHVFRFYRESLQRRYSKS |
NT seq |
708 nt +upstreamnt +downstreamnt
atggaggaggagatgcatactgatgccaagatccgcgctgaaactggaacagggtccagc
cctcggggtcctggctgcagcctccggcactttgcctgcgaacagaacctgctgtcgcgg
ccagatggctctgcttccttcctgcaaggtgacacctctgtcctggcgggtgtgtacggg
ccggccgaggtgaaggtcagcaaagaaattttcaacaaagccacactcgaagtgatcctg
aggccgaagatcgggctgcctggtgttgcagagaagagccgggagcggctgatcaggaac
acgtgtgaggcggtggtgctgggcacattgcacccccgcacctccatcaccgtggtgctg
caggttgtcagcgatgccggctctctcctggcctgttgtctgaatgccgcctgcatggca
ttggtggatgcaggtgtgcccatgcgggctctcttctgtggggtcacctgtgccctggac
tctgatgggaccctcatgctggatcctacatccaagcaagaaaaggaggcccgggcagtc
ctgacctttgccctggacagcgtggaacggaagctgctgatgtccagcaccaaggggctc
tactcggacactgagctccagcagtgcctggctgcggcccaggccgcttcgcaacacgtc
ttccgcttctaccgggaatcgctgcagaggcgttactccaagagctga |