KEGG   Pongo abelii (Sumatran orangutan): 100462188
Entry
100462188         CDS       T01416                                 
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100462188 (EXOSC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pon03019]
    100462188 (EXOSC5)
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100462188 (EXOSC5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 100462188
NCBI-ProteinID: XP_024092272
Ensembl: ENSPPYG00000010016
LinkDB
Position
20:complement(47149995..47161443)
AA seq 235 aa
MEEEMHTDAKIRAETGTGSSPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGTLHPRTSITVVL
QVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGTLMLDPTSKQEKEARAV
LTFALDSVERKLLMSSTKGLYSDTELQQCLAAAQAASQHVFRFYRESLQRRYSKS
NT seq 708 nt   +upstreamnt  +downstreamnt
atggaggaggagatgcatactgatgccaagatccgcgctgaaactggaacagggtccagc
cctcggggtcctggctgcagcctccggcactttgcctgcgaacagaacctgctgtcgcgg
ccagatggctctgcttccttcctgcaaggtgacacctctgtcctggcgggtgtgtacggg
ccggccgaggtgaaggtcagcaaagaaattttcaacaaagccacactcgaagtgatcctg
aggccgaagatcgggctgcctggtgttgcagagaagagccgggagcggctgatcaggaac
acgtgtgaggcggtggtgctgggcacattgcacccccgcacctccatcaccgtggtgctg
caggttgtcagcgatgccggctctctcctggcctgttgtctgaatgccgcctgcatggca
ttggtggatgcaggtgtgcccatgcgggctctcttctgtggggtcacctgtgccctggac
tctgatgggaccctcatgctggatcctacatccaagcaagaaaaggaggcccgggcagtc
ctgacctttgccctggacagcgtggaacggaagctgctgatgtccagcaccaaggggctc
tactcggacactgagctccagcagtgcctggctgcggcccaggccgcttcgcaacacgtc
ttccgcttctaccgggaatcgctgcagaggcgttactccaagagctga

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