Pongo abelii (Sumatran orangutan): 100462517
Help
Entry
100462517 CDS
T01416
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100462517 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pon04131
]
100462517 (SPATA13)
Membrane trafficking [BR:
pon04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100462517 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
100462517
NCBI-ProteinID:
XP_054385362
Ensembl:
ENSPPYG00000005211
LinkDB
All DBs
Position
14:25996407..26326471
Genome browser
AA seq
1384 aa
AA seq
DB search
MAKRRPHKHPGREECVFKSSWCRNSKNYAFHLEIKRRKHLECWVWSSTVQVQTPAVGTSP
TYQRGLSFVICKKAVATQEPDVQGRCECQDGIPGDEGLELRSADSAVPVAMIQAAVRPWA
PCLENMTTPPNGLGPGPAAPCAGSDLKDPKMVTSLACGNGVCGCSPGGDTDTQEAKLSPA
KLVRLFSTSRKRTGAHPERPRSMVLVGNSSTWNTLASFRKMGSFKKLKSSVLKGIQSREG
SNACSKGEALEHGLGKSIPNGTVPGSQASRGSPSAPGPACGALRPAEWGTLDGSDLEDTD
DAFQRSTHRSRSLRRAYGLGRICLLDAPQNHAAPTIAPGQVPAMCEILVRDPENNSMGYR
RSKSTDNLAFLKKSSFKRKSTSNLADLRTAHDAQVPQRTLSSSSTDSQKLGSGRTKRWRS
PIRAKDFDRVFKLVSNVTEAAWRRESPRSGAPSPGEASLRLQAHSRLHDDYSRRVSRSTE
QDSRRGGAVMHGTTAACTMVPGFGSATSKGPHLDADTAVFPLEAKSSWAVESDSSCTGSS
SPSPIVQDVLSKDSCDPNAGSQLTFDPEQPPTPLRPTTPKPQSPQSPGAGSANCHSDHSA
LSVNSEESEGRTEEPAQREPGPVSLQDPLEATHGDEGSKDLLVNIGVAAGPEEKEKEEVV
PDGPWRRGLSQDEERTEAQRTPKRRWGSGRRPRPRPFSDYGQLASRSLSIPEDSVATDPQ
KEDRVDEDPQASMTSASPEDQNAPVGCPKGARRRRPISVIGGVSLYGTNQTEELDNLLTQ
PASRPPMPAHQVPPYKAVSARFRPFTFSQSTPIGLDRVGRRRQMRASNISSDGGTEPSAL
VDDNGSEEDFSYEDLCQASPRYLQPGGEQLAINELISDGNVVCAEALWDHVTMDDQELGF
KAGDVIQVLEASNKDWWWGRSEDKEAWFPASFVRLRVNQEELSENSSSTPSEEQDEEASQ
SRQRHCENKQQMRTNVIREIMDTERVYIKHLRDICEGYIRQCRKHTGMFTVAQLATIFGN
IEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQNQEGFAIYSEYCNNHPGACLELANL
MKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHGDYSNIK
AAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKITKQ
GKSQQRTFFLFDHQLVSCKKDLLRRDMLYYKGRLDMDDMEVVDLGDGRDKDCNLSVKNAF
KLVSRTTDEVYLFCAKKQEDKARWLQACADERRRVQEDKEMGMEISENQKKLAMLNAQKA
GHGKSKGYNRCPVAPPHQGLHPIHQRHITMPTSVPQQQVFGLAEPKRKPSLFWHTFNRLT
PFRK
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgtaggcctcacaaacatcctggccgtgaagagtgtgtcttcaagagtagc
tggtgcagaaactcgaaaaactatgcctttcacttggaaataaagagaagaaaacatctt
gagtgttgggtctggagctcaactgtccaagttcaaacaccagctgtgggtacatcacca
acctaccagagagggctcagcttcgtcatctgtaaaaaggccgtggccacccaggagccc
gatgtgcaaggcaggtgtgagtgccaggacggcattcctggagatgaaggcctggagctg
cggtctgcggactcggcagtgcccgtggccatgatccaggctgccgtgcggccctgggca
ccctgcctggagaacatgaccactcccccaaacggcctcgggccaggccccgcagccccc
tgtgcaggctcggacctgaaagaccccaagatggtgacctcccttgcgtgtggaaatgga
gtctgtggctgcagccctggtggtgacacagacacccaggaagccaaactcagcccagcc
aagcttgtgcgccttttttccaccagtcggaagaggacgggtgcccaccccgagcggccc
cgctccatggtcctggtggggaactcctccacatggaacaccctcgcctccttccggaaa
atgggatcctttaagaaactgaagtcctcagtcctgaaaggaattcagagccgagagggg
tcaaatgcctgttcaaagggagaggctttggagcatggcctgggaaagtccatcccaaat
ggcactgtcccaggatcccaggcaagcaggggctccccctcagcaccgggaccagcatgt
ggtgccctcaggccagcagagtggggcacgttggacggctccgacctcgaggacacggac
gatgccttccagcggagcacacaccgctcccgcagcctccgcagagcctatggcctgggc
cgcatctgcctgctggatgcgccccagaaccatgcggcacccacgatagcccctggccag
gtgcccgccatgtgtgagattctcgtgagggaccctgaaaacaacagcatgggctacagg
aggagcaagagcacggacaatcttgcctttctgaagaagagctcctttaagcggaagtcc
acctccaatcttgcagacctcaggacggcccatgacgcacaggtgccacagaggaccctg
agcagttcctccactgactcccaaaagctcgggtcaggaaggaccaaacgctggaggagc
ccgataagggccaaggactttgacagagtcttcaaacttgtgagcaatgtgactgaggcc
gcctggaggagggagagtcccaggagtggggccccatcccctggtgaggccagcctgaga
ctccaggcacacagccggctgcatgacgactactcccgccgtgtctccaggagcactgag
caggacagcaggcggggcggggcggtcatgcatgggaccactgcggcttgcaccatggtc
cctggtttcggctcagccacctctaaggggccccacctagacgctgacactgccgtattt
cctcttgaagccaaaagttcctgggcggtggaaagcgacagttcttgcactggcagctcc
tcgccaagcccgattgtccaggatgtgttgagcaaagactcctgtgacccaaacgctggc
agccagttgacatttgaccctgagcagcctcccacccctctgaggcccaccacacccaag
cctcagagccctcagagccccggggcaggaagtgccaactgtcacagcgatcacagcgcc
ctgtccgtgaattcagaggaaagtgaaggaaggacagaagagcctgctcagagagagcca
gggcctgtgtccttgcaggatcccctggaagccacacatggtgatgagggcagcaaggac
cttctggtgaacattggtgtggcagccggcccagaagaaaaggagaaggaggaggtcgtc
cctgatggcccctggaggcgaggcttatcacaggatgaggaaagaacagaggcacagaga
acccccaagaggagatggggctctgggagacggccaaggcctcggccattctctgactac
ggccagctggccagccgcagtttgtctattcctgaagattcagttgctacagacccccag
aaggaagaccgtgtggacgaggacccccaggcaagcatgacttctgccagccctgaagac
cagaatgctccagtgggctgccccaaaggagcccggagaaggcgccccatttccgtgata
ggtggggtcagcttgtatgggaccaaccagacggaggaactggacaatcttctgacccaa
ccggcttccaggccgcccatgcctgctcaccaggtgccaccctacaaggctgtgtcggcc
cggttccggcccttcacattctcccagagcacccccattgggttggaccgtgtgggacgc
cggcggcagatgagagcatccaacatctcttcagatggaggtactgagccctctgcctta
gtggatgacaacggtagtgaggaggacttcagctatgaagacctctgccaggccagccct
cggtacctgcagcccggcggggagcagctggccatcaatgagctgatcagtgatggcaac
gtggtctgcgcagaagccctgtgggaccatgtgaccatggacgaccaggaactgggcttc
aaagccggggatgtcatccaggttctggaagcctccaacaaggactggtggtggggtcgc
agtgaagataaggaagcctggttccccgcgagcttcgtcagattgcgagtgaatcaggaa
gagctgtcggaaaactccagcagcacccccagcgaggagcaggacgaggaggccagccag
agccgccagaggcactgcgagaacaagcagcagatgcggaccaacgtcatccgggagatc
atggacaccgagcgggtgtacatcaaacacctcagggacatctgcgagggctatatccga
cagtgccgcaagcacacaggaatgttcaccgttgcgcagctagccactatttttggaaac
attgaagatatttacaaattccaaagaaagtttctgaaagaccttgagaaacagtacaac
aaagaggaacctcacttaagtgaaataggatcttgctttcttcaaaatcaagagggcttt
gccatctattctgagtactgcaacaaccacccgggcgcctgcctagagctcgccaacctt
atgaagcagggcaagtacagacatttcttcgaagcctgccgcctgctgcagcagatgatt
gacatcgccatcgacgggttcctgctcacaccagtgcagaagatctgcaaatacccgctg
cagctggccgagctactaaagtataccacacaggaacacggtgattacagcaacataaag
gcagcatatgaagccatgaagaatgtggcctgtctgatcaatgagcgcaagcgcaagctg
gagagcatcgacaagatagctcgctggcaggtgtccatcgtgggctgggagggactggat
atcttagaccgaagctcagaattgattcattctggggaactgaccaaaatcactaagcaa
ggcaaaagccagcagcggacattcttcctgtttgaccaccagctggtgtcctgcaagaag
gacctgctgcgcagggacatgctgtactacaagggccggctggacatggatgacatggag
gttgtggacctgggggatgggcgcgacaaggactgcaacctcagcgtgaaaaatgccttc
aagctcgtcagtaggaccacagacgaggtttatttgttttgtgccaaaaagcaagaagac
aaggcaaggtggctgcaggcctgtgcagatgaaaggaggcgggtgcaggaggacaaggag
atgggaatggaaatttcagaaaaccagaagaaacttgccatgttaaatgctcaaaaggca
ggacatggaaagtcaaaaggctacaacaggtgccccgtggccccaccgcaccagggcctg
caccccatccaccagcgccacatcactatgcccacaagcgtcccccagcagcaggtcttt
ggcctggcggaacccaagaggaagccctcgctcttctggcataccttcaacaggctcacc
cccttccggaaataa
DBGET
integrated database retrieval system
