Pongo abelii (Sumatran orangutan): 112131356
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Entry
112131356 CDS
T01416
Name
(RefSeq) LOW QUALITY PROTEIN: SCO-spondin-like
KO
K24434
SCO-spondin
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pon04990
]
112131356
Domain-containing proteins not elsewhere classified [BR:
pon04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
112131356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWD
TSP_1
C8
Ldl_recept_a
TIL
TSP1_spondin
F5_F8_type_C
Pacifastin_I
VWC
Motif
Other DBs
NCBI-GeneID:
112131356
NCBI-ProteinID:
XP_024097105
LinkDB
All DBs
Position
7
Genome browser
AA seq
3101 aa
AA seq
DB search
MLLPALLFGMAWALADGRWCEWTETIRVEEEVAPRQEDLVPCASLDHYSRLGWRLDLSWS
GRAGLTRSPAPGLCPIYSEPPETRPAKWNRTVRACCPGWGGAHCTEALVKASPEGHCFAM
WQCQLQAGSANASAGSLEECCAWPWGRSWRDGSSQACLSCSSRHLQGGASFPALLQPLAG
AVGQLWSQHQRPSATCASWSGFHYRTFDGRHYHFLGRCTYLLAGAADSTWAVHLTPGDPC
PQPGHCQLVQVTMGPEEVLIQAGNVSAKGQLVPEGQSWLLHGGKXPLSVPRLSLQWLGDW
LVLSGGLGVVVRLDRAGSISISVDHELWGQTQGLCGLYNGWPEDDFMEPCGGLAMLAATF
GNSWRLPDSEPGCLDAVEVAQGCDGPLGLTEADVEPGHLRAEAQDVCHQLLEGPFGQCHA
QVSPAEYHEACLFAYYAGAMAGSGQEGRQQAVCATFASYAQACARRHIHIRWRKPGFCER
LCPGGQLYSDWISLCPPSCEAVGQEEEESCREECVSGCECPRGLFWNGTLCVPAARCPCY
YRHQRYAPGDTVRQLCNPWWVCRDGRWNCAQALCPAECAVGGDGHYLTFDGRSYSFRGGQ
GCRYSLVQDYVKGQLLILLEHGACDAGSCLHAISVSLEDTHIQLRDSGAVLVNGQDVGLP
WIGSEGLSVRRASSAFPLLRWPGAQVLWGLSDPAAYITLDPRHAHQVQGLCGTFTQNQQD
DFLTPAGDVETSIAAFASKFQVAGKGRCPSGDSALLSPCTTHSQRHAFAEAACAILHSSV
FQECHRLVDKEPFYLRCLAAVCGCDPGRDCLCPVLSAYARRCAREGASSPWRNQTLCPVM
CPGGQEYRECAPACGQHCGEPEDCGELGSCVAGCNCPLGLLWDPEGQCVPPSLCPCQLGA
RRYAPGSTTMKECNRCICQERGLWNCMARRCPPQQAFCPRELVYAPGACLLTCDSPSANH
SCPAGSADGCVCPPGTVLLDERCVPPDLCPCRHSGQWYLPNATIQEDCNVCVCRGRQWHC
TGQRYSGRCQASGAPHYVTFDGLAFTFPGACEYLLVREASGLFTVSAQNLPCGASGLTCT
KALAVHLEGTVVHLLRGRAVTVNGVSVMPPKVYTGPGLSLHRAGLFLLLSTRLGLTLLWD
GGTRVLVQLSPQFRGRVAGLCGDFDGDASNDLRSRQGVPEPTAELAAHSWRLSPLCPEPG
DLPHPCTVNTHRAGWARARCGALLQPLFASCHTEVPPQQHYEWRLYDACGCDSGGDCECL
CSAIATYADECARHGHHVRWRSQELCPLQCEGGQIYEACGPMCPPTCHEQHPEPGWHCQV
VACVEGCFCPEGTLLHGGACLEPASCPCEWGRNSFPPGSVLQKDCGNCTCQEGQWHCGGD
GGHCEELVPACAEGEALCQENGHCVPHGWLCDNQDDCGNGSDEEGCAAPGCGEGQMTCSS
GQCLPLALLCDGQDDCGDGTDEQGCPCPQGLRACADGCCLPPALLCDGHPDCPDAADEES
CLGQVTCVPGEVSCVDGTCXGAIQLCDGVWDCPDGADEGPGHCPLPSLPTPPAGTLPGPS
PGSLDTESSPLASASPAPPCGPFEFRCGSGECTPRGWRCDQEEDCADRSDERGCEGPCAP
HHAPCARGPHCVSPEQLCDGVRQCPDGSDEGPHACGSTQLPPCPGLFPCGVAPGVCLTPE
QLCDGIPDCPQGEDELDCGGLPALGGPNGTGLRCPEYTCPNGTCIGFQLVCDGQPDCGGP
GQVGPSPEEQSCGAWGPWSPWGPCSRTCGPGGQGRSRRCSPLGLLVLQNCPGPEHQSQAC
FTAACPVDGEWSAWSPWSVCSEACRGTMTRQRQCHPPQNGGRTCAALPGGLHITRQTKPC
PQDGCPNATCSGELMFQPCAPCPLTCDDISGXVMCPPDRPCSSPGCWCPEGQVLGSEGWC
VWPWQCPCLVDGTRYWPGQRIKADCRLCICRDGWPRRCRLNPDCAVDCGXSSWSPWAECP
GPCGSQSIQWSFRSPNNPRPSGRGRQCRGIHRKARRCQTEPCEGCEHQGQVHRVGERWRG
GPCRVCQCLHNLTARCSPYCPLGSCPQGWVLVEGTGESCCHCALPGENQTVQPMATPAAA
PAPSPQIRFPLATYILPPPGDPCYSPLGLAGLAEGSLHASSQQLEHPTQAAFLGAPTQGP
GPQGWHAGGDAYARWHTRPNYLQLDLLQPRNLTGIIVPETGSSNAYATSFSLQFSSNGLH
WHDYHDILPGILSLPKLFPRDWDDLDPAVWTFGRMVQARFVRVWPPDVHHSDVPLQVELL
GCEPGSPPAPLCPGVGLRCASGECVLRGGPCDSVLDCEGGSDEEGCVLLPEGTGRFHSTA
KTLALSSAQPGQLPHWPREGLAETEHWPPRQESPTSPTETRPMSPGPASGVPHHGESXQM
VTTTPISQMEARTLPPGMAAVTVLPPHRVTPVTPAGQSVAPGPFPPVQCGTGQTPCEVLG
CVEQAQVCDGREDCLDGSDERHCVAGAWVPWEAWGACSVSCGGGHQSRRRSCVDPPPKNS
GAPCPGASQERAPCGLQPCSGGTDCELGRVYVSADLCQKGLVPPCPPSCLDPKANRSCSG
HCVEGCRCPPGLLLHDTRCLPLSECPCLVGEELKWPGVSFLLGNCSQCMCEKGELLCQPG
GCPLPCGWSAWSSWAPCDRSCGSGVRARFRSPSNPAAAWXGAPCEGDRQELQGCHTECGT
EVLGWTPWTSWSSCSQSCLAPGGGPGWRSRSRLCLSPGDSFCQGEATQEEPCSPPVCPVP
SVWGLWAPWSTCSAPCDGGIQTRGRSCSSLAPGDTTCPGPHSQTRDCNTQPCTAQCPEDM
VFRSAEQCHQEGGPCPRLCLTQGPGIECTGFCTPGYTCPPGLFLHNASCLPRSQCPCQLH
GQLYASGAMALLDSCNNCTCVSGEMACTSECCPVACGWSPWTPWSLCSRSCNVGIRRRFR
AGTAPPAAFGGAECQGPTMEAEFCSLRPCRGPGGEWGPWSPCSVACGGYRNRTRGSGLRS
LMEFSTCGLQPCAGPVPGMCPRGKQWLDCAQGPASCAELSAPRGTNQTCHPGCHCPSGML
LLIPSAPATVMELTLLPLTLGDTHTVPVPHEQAAITPTTTA
NT seq
9306 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccctgccctcctctttgggatggcgtgggccctggctgacgggcggtggtgt
gagtggacagagaccatccgtgtggaggaggaagtagcaccccgtcaggaggacctggta
ccctgtgccagcctcgaccattacagccgcctgggctggcggctggacctgtcctggagt
ggccgcgcggggcttacccggtccccagcgcctgggctctgtcctatctacagtgaacct
ccagaaacccggcctgccaagtggaaccggacagtgagggcttgttgcccaggctggggg
ggcgcccactgcactgaggcccttgtcaaagccagtcctgaaggccactgctttgccatg
tggcagtgccagcttcaggcaggctcagctaatgcctcagcgggaagcctggaggagtgc
tgcgcctggccctggggacgaagctggcgggatggcagctcccaggcctgcctcagctgc
tctagccgacacctgcaaggtggtgcctcttttccagcccttctgcagcccctggcaggg
gctgtgggccagctctggagtcagcaccagcgtccctcagccacctgtgcctcctggtcg
ggcttccactaccgcacctttgacggccgccactatcacttcctgggccgctgcacctac
ctgctggcgggtgctgcggactccacctgggctgtccacctaacacccggggacccctgc
ccccagcctggacactgtcagctggtccaggtgactatgggacccgaggaggtgctgatc
caggctggaaatgtgtctgcgaagggccagctggtacctgaagggcagtcttggctgctc
cacgggggcaagtgacctctttctgtgcccaggctgagcctgcaatggctgggggactgg
ctggtgctgtcagggggcctgggggtcgtggtgcggctggacagggctggctccatctcc
atctctgtggaccacgagctctggggacagacacaaggcctctgtgggctctacaatggc
tggccagaggatgacttcatggagccatgcggggggctggccatgttagcagccaccttt
ggaaattcctggaggctccctgactcggagcctgggtgtctggatgcggtggaggtggcc
cagggctgtgacggccccctggggctcacagaggcagatgtagaacctggccacctgcgg
gctgaagcccaggacgtgtgccatcagctgctggaaggtccattcgggcagtgccatgcc
caggtttcccctgctgagtaccatgaggcctgtctctttgcctactacgcaggggccatg
gcaggcagcgggcaagaggggcggcagcaggctgtttgtgccacctttgccagctatgcc
caggcctgtgccaggcggcacatccacattcgctggaggaagcctggcttctgcgagcgc
ctgtgccccgggggccagctctactccgactggatctccctctgcccacccagctgcgag
gcggtgggtcaggaagaggaggagtcctgcagggaagagtgtgtgagtggctgtgagtgc
ccgcgaggcctcttctggaacggcaccctctgtgtgcctgctgcccgctgcccctgctac
taccgccaccagcgctatgcacccggtgacaccgtgcgccagctgtgtaacccctggtgg
gtgtgcagggatggccgctggaactgtgcccaggccctatgccccgccgagtgtgccgtg
ggcggggacgggcactacctcaccttcgatgggcggagctactccttccggggtggtcaa
ggttgccgctacagcctggtgcaggactatgtgaagggccagctactgatcctactggag
catggggcctgcgacgctgggagctgcctccacgccatctccgtctccctggaggacacc
cacatccagctcagggactcaggagctgtgctggtcaatgggcaggatgtgggcttgccc
tggattggctctgagggcctcagtgtgcgccgagcttcctccgcctttccgctgctgcgc
tggcctggggcccaggtgctctggggactctctgaccctgcggcctacatcaccctggac
ccccgccatgcccaccaggtgcagggtctgtgtggcaccttcacccagaaccagcaggac
gacttcctgacaccagccggagatgtggaaactagcattgctgcctttgctagcaagttc
caggtggccggcaagggaagatgcccctctggagacagtgccctgctctctccctgcacc
acccactcccagcgccacgccttcgcagaggcggcctgtgccatcctgcacagctctgtc
ttccaggaatgccacaggctggtggacaaggagccattctatctgcgctgcctggcagcc
gtgtgtggctgcgaccccggcagggactgcctgtgcccggtgctgtctgcctatgcgcgt
cgctgtgcccgggaaggtgcctcatctccctggaggaaccagaccctctgccctgttatg
tgtcctggtggccaggagtaccgagagtgtgccccagcatgcggtcaacactgcggggaa
ccagaggactgtggagagctgggcagctgtgtggctggttgtaactgtcctctggggctg
ctgtgggaccctgagggccagtgtgtgccccccagcttgtgcccctgccagctcggagcc
cgtcgctatgcccctggcagtaccaccatgaaggagtgcaaccgctgcatctgccaggaa
aggggcctctggaattgcatggctcgccgctgccctccacagcaggcattctgccccagg
gagcttgtctatgcccctggtgcctgtctcctcacctgtgacagtcccagtgccaatcac
tcctgccctgcaggcagtgctgatggctgtgtctgtccaccaggcacggtgctgctggac
gagcgctgtgtgcctcctgacctctgtccctgccgtcacagtgggcagtggtacctgccc
aacgccaccatccaggaagactgcaacgtttgcgtgtgccggggccggcagtggcactgc
acaggccagcggtacagtgggcggtgccaggcgtcaggcgccccccactatgtgacattc
gacggactggccttcacctttcctggggcctgcgagtatctgctggtgcgagaggccagt
ggcctattcacagtctctgcccagaacctgccctgtggggccagcggtctcacctgcacc
aaagcgctggccgtgcatctggagggcactgttgtgcacctgctcagaggccgggcagtg
acggtgaatggggtgagcgtgatgccccccaaggtctacacaggccccgggctgagcctg
catcgtgctggcctcttcctgctgctctcgacccgcctgggcctcaccctgctctgggat
ggagggactcgggttctggtgcaactgtcccctcagttccgtggtcgcgtggctgggctg
tgtggtgactttgatggagatgccagtaatgatctgcggagccgccagggtgtcccggag
cccacagctgaactggccgcccactcctggcgcctcagccccctctgccctgagccagga
gacctgccacacccctgcacagtgaacacacaccgggctggctgggctcgggcccgctgc
ggggcgctcctgcagccgctcttcgcatcatgccacacggaggtccccccgcagcagcac
tatgagtggcgcctgtatgacgcctgcggctgcgactcagggggtgactgtgagtgcctc
tgctcggccattgccacctacgcagatgagtgtgcccggcatgggcaccacgtgcgctgg
cgtagccaggagctctgccccctgcagtgtgaagggggacagatatatgaggcctgtggc
cccatgtgtccccccacctgccatgagcagcatcctgagcccgggtggcactgccaggtg
gtggcctgcgtggagggctgcttctgccccgaggggactctgctgcacggaggagcctgc
ttggagccagcttcctgcccctgtgagtggggccgcaactccttcccgccggggtctgtg
ctgcagaaggactgcgggaactgcacgtgccaggaaggtcaatggcattgtgggggtgac
ggtggccactgtgaggagcttgtgcctgcttgtgcagagggagaggccctgtgccaagag
aatgggcactgtgtgccccatgggtggctttgtgacaaccaggacgactgtggcaatggc
tctgatgaggagggttgtgccgccccaggctgtggggaggggcagatgacttgcagctcc
ggccaatgcctgcccctggccctgctctgtgacggccaggatgactgtggagatggcacg
gatgagcagggctgcccgtgcccccagggcttgcgggcctgtgccgatggatgctgcctg
cccccggccctgctctgcgatgggcatcctgactgtccggatgccgccgacgaggagtcc
tgtctggggcaggtgacctgcgtccccggggaggtgtcctgtgtcgatggcacctgcnct
ggggccatccagctgtgtgacggagtctgggactgcccagatggagctgatgaggggccc
ggacactgccccctaccttctctgcccacgcctcctgccggcaccttgcctggcccctcc
cctggctccttggacacggagtcaagtcccctggccagcgccagccctgcgccgccctgc
ggccccttcgagtttcggtgcggcagcggcgagtgcaccccgcggggctggcgctgcgac
caggaggaagactgcgccgaccgcagcgacgagcgcggctgcgaagggccctgcgcgccg
caccacgcgccctgcgcccgcggccctcactgcgtgtcccccgagcagctgtgcgacggc
gtgcggcagtgtcccgacggctcggacgagggcccccacgcctgcggctccacccagctg
cctccgtgccctggcctctttccctgtggtgtggctccgggggtgtgcctgacccctgag
cagctctgtgatgggatcccagactgtccccagggcgaggacgagctggactgcgggggg
ctgccagcccttggaggccccaacgggacaggtcttcgctgcccagaatacacctgcccc
aatggcacctgcataggcttccagctggtgtgtgacgggcagcctgactgtggagggcca
ggacaggtgggcccctccccagaagagcagagttgtggggcctggggcccctggagccca
tgggggccctgcagccggacatgtgggcccggggggcagggccggagccgccgctgctcc
ccactcggcctcctggtgctacagaactgcccagggcctgagcaccagtctcaggcctgc
ttcacggcagcctgcccagtggacggtgaatggagcgcctggtccccctggtctgtgtgc
tctgaggcgtgcaggggcaccatgacgcggcaacggcagtgccacccaccccagaatggg
ggccgcacctgcgctgcactgcccggaggcctgcacatcacccgccagaccaagccttgc
cctcaggacggctgccccaatgccacctgctctggggagctgatgttccagccctgtgcc
ccctgcccactgacctgtgatgacatctctggctaggtcatgtgcccacctgatcggccc
tgcagcagccctggctgctggtgcccagaagggcaggtgctgggcagcgaggggtggtgt
gtgtggccttggcagtgcccctgtctggtggacggcacccgctactggcccgggcaacgc
atcaaggccgactgtcggctctgcatctgccgagacggatggccccgacgctgccgactc
aacccggactgtgctgtggactgtggctagtcctcctggtcaccctgggctgagtgcccg
ggcccctgtggaagccagagcatccagtggtccttccggagccccaataacccccgcccc
tccggccgaggtcgccagtgccgtggcatccaccgcaaggcacgcaggtgccagacggag
ccctgtgaggggtgtgagcatcagggccaggtccaccgtgtcggggaacgctggcgtggg
ggcccctgcagggtgtgccagtgtctgcacaacctcaccgcacgctgctcaccctactgc
ccgctcggcagctgcccccagggctgggtcttggtggaggggacgggagaatcatgctgc
cactgtgccctacctggagagaaccagacagtccagcccatggccactcctgccgcagct
ccggctcccagtccccagatcagattccctttagccacttacattctgcctccgccagga
gacccctgctattctcccctggggctggccggactggctgaagggagtctgcatgcatcg
tcccagcagctggaacaccccacccaggctgccttcctgggggctcccacccaggggccc
ggccctcagggatggcacgctggaggggatgcttatgccaggtggcacactcggcccaat
tacctgcagctggacctgcttcagccccggaacctcactggcatcatagtgccggagact
ggctcctccaacgcatatgccaccagcttctcactccagttcagcagcaatggtctacac
tggcatgactatcatgacatcctgcctggcatcttgtccctgcccaagcttttccccaga
gactgggatgacctggaccctgccgtatggactttcggccgcatggtgcaggcgaggttt
gtcagggtgtggccccccgatgtccaccacagcgatgtccccctgcaggtggagttgctg
ggctgcgagccagggtccccaccggcacctctgtgcccaggggttggactccgctgtgcc
agtggtgagtgtgtcctgagagggggcccgtgcgacagtgttctggactgcgagggtggc
tcggatgaggagggctgtgtgttgctgcctgagggcactggcagattccattccacagcc
aagaccctggccctctcctccgcccagccggggcagctgccgcactggcccagggagggc
ctggcagagactgagcactggcctcccaggcaggaatcccccacgtccccgacagagaca
aggcccatgagtcctggcccagcctccggggtgcctcaccatggggaatctnngcagatg
gtgaccaccacccccatatcccagatggaggccaggaccctgccaccaggtatggcagct
gtgacggtgctgcccccacaccgtgtgactccagtgacccctgctggccagagcgtcgcc
ccagggcccttcccacctgtgcagtgtggcaccggccagacgccctgtgaggtgctgggc
tgcgtggaacaggcgcaggtgtgtgatggcagggaggattgcctcgacggctctgacgag
aggcactgtgtggctggggcgtgggtcccgtgggaggcctggggagcctgcagcgtctcc
tgcgggggtggccatcagagtcgccggagaagctgtgtggaccccccacccaagaacagc
ggtgccccctgccccggggcctcccaagagagggcaccctgcggcttgcagccctgctca
ggtggcacagactgcgagctgggccgtgtgtatgtgagtgccgatctgtgccagaagggt
ctggtgcccccgtgcccaccctcctgcctggatcccaaggccaacagaagctgcagtggg
cattgtgtggaaggatgccgctgtcccccagggctccttctgcatgacactcgctgcctg
cctctctctgagtgcccctgcctggtgggcgaagagctgaagtggccaggggtgtccttc
ctcctgggcaactgcagccaatgcatgtgtgagaagggggagttgctgtgccaaccaggg
ggctgccccctgccctgcggctggtcagcctggtcctcctgggctccctgcgaccgctcc
tgtggctccggagtgagggctaggttcaggtctccctccaaccctgcggcagcctggngg
ggtgccccgtgtgaaggtgaccggcaggaactgcagggctgccacacagagtgtgggaca
gaggtgctgggctggacgccctggacttcctggtcctcctgctcccagagctgccttgcc
cctggagggggccccggctggcgcagtcgttcccgactctgcctcagccctggggattca
ttctgccaaggagaggccacccaggaggagccctgcagcccccctgtatgcccagtgcca
agcgtctggggtctgtgggctccctggtccacttgctcagccccctgtgatggaggcatc
cagacacgcgggcgcagctgctccagcttggctccaggggacaccacgtgcccaggaccc
cacagtcagacaagggactgcaacacgcagccctgcacagcccagtgcccagaggacatg
gtgttccgctcagcagagcagtgtcaccaggaggggggcccttgccctcggctgtgcctg
acacagggccccgggatagagtgtacgggcttctgcacccccggctacacctgcccccct
ggtctgttcctgcacaatgctagctgcctgccccgcagccagtgcccctgccagctgcat
gggcagctctatgcatcaggagcaatggctctcctggactcctgcaacaactgcacctgc
gtctccggtgagatggcatgcacctcggagtgctgcccagtggcctgtggctggagtccc
tggaccccgtggagtctctgtagtcgcagctgcaacgtgggcattcggcgccgcttccgg
gcgggcactgcacccccagctgcctttgggggtgctgagtgccaaggccccaccatggag
gctgaattctgcagcctgcggccatgtcgaggtcctggtggggagtggggcccttggtct
ccgtgctccgtggcctgtggtggttacaggaaccgcacccgaggcagcggcctgcgcagc
ctcatggagttctccacctgtggcctgcagccctgcgcagggccagtgcctggcatgtgt
cccaggggcaagcagtggctggactgtgcccagggccctgcctcctgtgcagagctcagc
gccccaagagggactaaccagacctgccaccctggctgccactgcccctctgggatgctt
ctgctgatcccttcggctcctgccacagtgatggagctaacactgctgccactgacccta
ggagacacgcatacagtcccagtgccacatgagcaagctgccatcacccctaccaccaca
gcttag
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