Pongo abelii (Sumatran orangutan): 129047247
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Entry
129047247 CDS
T01416
Symbol
RP1L1
Name
(RefSeq) LOW QUALITY PROTEIN: retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pon03037
]
129047247 (RP1L1)
04812 Cytoskeleton proteins [BR:
pon04812
]
129047247 (RP1L1)
Cilium and associated proteins [BR:
pon03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129047247 (RP1L1)
Cytoskeleton proteins [BR:
pon04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
129047247 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
129047247
NCBI-ProteinID:
XP_054402123
LinkDB
All DBs
Position
7:11920630..11940076
Genome browser
AA seq
2351 aa
AA seq
DB search
MNSTARDAQAPSHRECLLPSVARTPSVTKVTPAKKITFLKRGDPQFAGVRLAVHQRAFKT
FSALMDELSQRVPLSFGVRSVTTPRGLHSLSALEQLEDGGCYLCSDKKPPKTPSGPGRPQ
ERNPTAQHLRDIEGQHEAPGTSSSRKSLKTPRRILLIKNTDPRLQQTVVLSHRNTRNLAA
FLSKASDLLHFPVKQLYTTSGKKVDSLQALLHSPSVLVCAGHEAFRPPAMKNARRSEAET
LSGLTSRNKNGSWGPKTKPSVIHSRSPPGSRPRLPERPGPSNPPAGPAPDRHPQDTIAQP
GPLVAGDDMKKKVRMNEDGSLSVEMKVRFHLVGEDTLLWSRRMGRASALTAASGEDPVLG
EVDPLCCVWEGYPWGFSEPGVWGPRPCRMGCREAFGRGGQPGPKYEIWTNPLHASQGERV
AARKRWGLAQHVRCSGLWGHGTAGRERCSQDSASPASSTGLPEGSEPDSSCCPRTPEDGV
DSSSPSAQRGAERKAAGSLGEDPGLCTDGAGLGGLEQGGRLTPRARSEEGASSDLSASTG
SHEGSSEWGGRPQGCPGKARAETSQKEATEGGDPGSPALSLSSLRSEDLQAEMQGQGTEQ
ARGASVTKEPLVPGLSGSWDSEGASSTPSTCASSQQGRRRHRSRASAMSSPSSPGLGRVA
PRGHPRHSHYCKDTHSPLDSSATKQVPRPPERRRACQDGSVPRSSGSSSSTRTQASGNLR
PPSSGSLPSQDLLGTSSATVTPTGHSDFASGVSLHNAPSAGRAGDAGSRTCLPAPIPPHT
SDSCSKSGAASLGEEARDTPQPSSPLVLQVGWPEQGAVGPHQSRCCSQAGTQPAQEAQRE
PSPEASWLCGRYCPTPPRGRPCPQRRSSSCGSTSSSHRSAAQGPGGSQQEEGTRQAGPTP
SPGPNSGASRRSSASQGAGSGGLSQEKTSRSGGGPQGQEEASGVSPSSLPRSSPEAVVRE
WLDNIPEEAILMTYEMVDETTGAAGGGLRGPEVDPGDDHSLEGLGEPAQAGQQSLEGDPG
QDPEPEGALLGSRDSGPQSGEGVPQGAAPEGVSEAPAEAGADREAPAGCEVSLRALPGRV
SASTQIMRALMGSKQGRPSSVPEVSRPVARRLSYSAGALITCLASLQLFDEDLGSPASKV
RFKDSPRYQELLSISKDLWPGCDLGEDQLDSGLWELTWSQALPDLGSHAMTENFTPTSSS
GVDVSSSSGGSGESSIPCAMDGTLVPQGTELPLKTSNQRPHSRTSENPGDLENQQQCCFP
TFLNARACACATNEDEAERDSEEQRASSNLEQLAENTVQEEVQLEETKEGTEGERLQEEG
VQLEETKTEEGLQEEGGVQLEETKGTEGKGQQEEEVQLEEIEETGGEGLQEEGVQLEEVK
EGPGGGLQGKALEEGLKEEGLPEEGSVHGQELSEASSPDGKGSREDDPVQEEEAGRASAS
AELCPPEGTEEPTEPPSHLSETDPSASESQSGSQLEPGLEKPPGATVMGQEHTQAQPTQA
AAERSSSAACRAALDCDPIWVSVLLKKTKKAFLAHLASAVAELRARWGLQDNDLLDQMVA
ELQQDVAQRLQDSTKRELQKLQGRAGRMVLEPPRQALTGELLLQTQQRRHRLRGLRNLSA
FSERTLGLGPPSFTLEDEPALSTALGSQLGEEAEGEEFCPCEACVRKKVSPTSPKATMGA
TRGPIKEAFDLQQILQRKRGEHTDGEAAEVAPGKTHTDPTSTRTVQGAEGGLGPGLSQGP
GVDEGEDGEESQRLDRDKDPKLGEAEGDAMAQERKGKTHDSETSAGSELGEAEQEGEGIS
ERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPKAEGESQPESEGAEAQEAEE
ESQPESEGVEAPEAEGESQPESEGVEAQEAEKEAQEAEEEAQPESEGVEAPEAEGEAQEA
EKEAQPETESVEALETEGEDQPESEGAEAQEAEEEAQEAEGEAQPESEVVEAPEVEGEMQ
EAEGEAQPESEGVEAPEVEEETQKTEGGAQPESDGVEAQEAEEEVQEAEGEVQEAEGEAQ
PESEXLEVQEAEGEAQPESEVVEAPEVEEETQKTEGGAQPESDGVEAQEAEEEVQEAEGE
AQPESEGVEAQEAEEEVQEAEGEAQPESEGVEAPEAEGQAQPESESVEAPEAEGEAQPES
EGVEALAAEEEAQPEPEGVEAPEAEGEAQPESEGETQGEKKGSPQVSLGDSQSEEASESS
SPVPEDRPTPPPSPGGDTPHQRPGSQTGPSSSRASSRGNCWWKDSENDHVRGDTRSPDAK
SMGAPHAERKATRMYPESSTYEQEEARLGPRTPEQGASEGCDLQEDQALGSLTPTEAVGR
ADGFGQDDLDF
NT seq
7056 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaccgcgagggatgcccaggccccgagccaccgtgagtgcctcctgccctct
gtggctcgcaccccctcggtcaccaaggtcacgccagccaagaagatcaccttcctcaag
cgaggggatccacagtttgctggggtccgcctggccgttcaccagcgcgcctttaagacc
ttcagcgccctcatggatgagctctcccagcgcgtgcctctctcctttggggtgcgctct
gtcaccacaccccggggcctgcacagcctcagcgccctggagcagctggaagatggtggc
tgctatctctgctctgataagaagccccccaagacccccagtggaccaggccggccacag
gagagaaaccccactgctcagcacttgcgggatatcgaaggccagcatgaagccccagga
acctcctcctcccggaagagtcttaaaaccccccggaggatactgctaattaagaatacg
gaccctcgcctccagcagacagtggttctcagtcacaggaatactaggaacctggctgcc
tttctcagcaaagcctcagatctcctgcactttcctgtgaagcagttgtacacgaccagc
gggaaaaaggtggactcgctgcaggccctgctgcacagcccctctgtgctggtgtgtgcc
gggcatgaggccttcagacccccagccatgaaaaatgccaggagaagcgaggctgaaact
ttatctgggctgacttcaagaaacaaaaatgggagctgggggccaaagacgaagccgagt
gtgatccattcgcggtccccgccaggcagcaggccacggctgccagaaaggcctggtcct
agcaaccccccggcgggccctgctcctgacaggcaccctcaggacacgatagctcagccg
ggcccgctggtggccggcgatgacatgaagaagaaggtccgcatgaatgaggacggcagc
ctgtcggtggagatgaaagtccgcttccacctggttggtgaggacacgctcctgtggtcc
cggagaatgggcagggccagcgccctcacggcagccagtggggaagaccccgttctgggg
gaggtggaccccctctgctgtgtgtgggagggctacccttggggcttctcagagcctggg
gtgtggggaccccggccctgcaggatgggatgcagggaagcctttggccgaggcgggcag
ccagggcccaagtatgaaatctggacgaatcccctgcacgcctcccagggggagagagtg
gcagctcggaagaggtggggactggcccagcacgtccgctgcagtggcctgtggggccac
gggactgctgggagggagagatgcagccaggacagtgccagcccagcctccagcaccggc
ctccccgagggctcggaaccagactcctcttgctgccccaggaccccggaggacggggtg
gacagcagcagcccctctgcccaaagaggggctgagcggaaagctgcagggagcctgggt
gaggaccccggcctgtgcacagatggagcagggctgggtggcctagagcaaggtggccgc
ctgacacccagggcccggagtgaggagggggcttcttcagacttgtcagccagcaccgga
tctcacgagggatccagcgaatggggtgggcggccccagggctgtccaggcaaggcaagg
gccgagacctctcagaaggaggccaccgagggaggcgaccccggttctccagccctgagt
ctttcatctttaaggagtgaggacctgcaggcagagatgcaaggacagggtaccgagcag
gccaggggggcatctgtgacaaaggagcctctggttccaggcctttccggctcctgggac
tcggaaggagcctcttccaccccttccacctgcgcttcatctcagcaggggcggagaagg
catagaagccgggccagtgcaatgtcctcacccagcagccctggccttggccgagtggcc
ccgagaggccatcccaggcattctcactactgcaaggacacccacagcccactggactcc
tctgcaaccaagcaagtgccgaggcctcctgagcggcgaagggcctgccaggatggctca
gtgccacgatcttctggaagctcatcgagcaccaggacccaggcctccgggaacctgaga
cctccctcctcgggatctcttccttcccaggaccttctgggaaccagcagtgccactgtc
acccctacaggccactcagattttgcttctggagtctccctgcacaacgctccctctgcc
gggcgggcaggggacgcggggtccaggacatgcttgccggcccccataccgccccacaca
tccgactcctgctcaaaatctggggctgccagcctgggggaagaggccagggacacgcct
cagccctcctcacccttggttctgcaggttggatggcctgagcaaggggcggtaggcccc
caccaaagccgctgctgctcacaggctgggacgcagccggcccaagaggcccagcgggaa
ccctcccctgaggccagctggctgtgtggcaggtactgtcccaccccacccagggggcgg
ccctgcccccagaggcgctcttccagctgtgggagcaccagcagcagccaccgaagcgct
gcccaggggccaggtgggagccagcaggaggaggggacacgccaggcaggccccacaccg
tccccgggccccaattcaggggcatcaaggagaagcagtgccagccagggtgcggggtct
ggggggctgtcccaggagaagacctcgaggagtgggggaggcccccaggggcaggaggag
gccagtggtgtgtcacccagctctctgccccgatcatctccagaagctgtggtccgtgaa
tggctggacaacattccagaagaggccatactcatgacatatgagatggtggacgagacc
acaggtgcagccgggggtggcctgagaggccccgaggtggaccctggggatgaccattct
ctggaaggcctgggggagccagctcaggcgggacaacagtccctggaaggggaccccggc
caggacccagagccagagggagccctcctggggagtagggacagtggtccccaatcagga
gagggtgtcccccaaggggcagctccagagggagtttccgaggcccctgcagaggccgga
gcagacagagaggccccagctggctgcgaggtgagcctgcgggcacttcctggccgggtg
tctgcctccacgcagatcatgagggcgctgatgggctccaagcagggccggcccagcagc
gtgcccgaagtgtctaggcccgtggccaggaggctcagctactcagccggggccctcatt
acttgtctggccagtctccagttatttgatgaagaccttgggtctcctgccagcaaagtg
aggttcaaagactcccctcggtaccaggagctgctcagcatctcgaaggacctgtggcca
ggatgtgaccttggggaagaccagctggactcaggcctctgggagctcacatggagccag
gctctgccagaccttgggtcccatgccatgacagagaacttcacgcccacgtcctcctct
ggtgtggacgtcagcagcagctctggaggctcaggggagagcagcataccctgtgccatg
gacggcaccctggtcccacaggggacagagctgcccctgaaaacctccaaccagaggcct
cattccagaacctctgagaacccaggggatctggaaaaccaacagcagtgttgtttccca
accttcttgaatgcccgagcctgcgcttgtgccaccaatgaggatgaagcagaaagagac
agtgaggagcagagggcgagctccaacctggagcagttagctgaaaacacagtgcaagaa
gaggtgcaattagaggaaactaaagaaggaacagaaggagaaaggctgcaagaagagggg
gtgcagttagaggaaactaaaacagaagaagggctgcaggaagaggggggggtgcagtta
gaggaaactaaaggaacagaaggaaaaggacagcaagaagaagaggtgcagttagaggaa
attgaagaaacaggaggagaagggctgcaagaagagggggtgcagttagaggaagttaaa
gaaggaccaggaggaggactgcaaggaaaggctcttgaagagggtctcaaagaggaagga
cttccagaagaaggaagtgtccacgggcaggaattgtcagaggccagctctccagatggg
aaaggctcccgggaagatgacccagtccaggaggaggaagcaggaagagcctctgcctct
gcagagctgtgccccccagagggcacagaggaacccacagagccccctagtcatctcagc
gagacggatccaagtgccagcgagagtcaaagtggctcccagcttgagcctggcttggaa
aagcctcccggagccaccgtgatgggccaagagcacacgcaggcccaacccacccaggcg
gctgcagagaggagctcttcagctgcctgcagagcggctctggactgcgaccccatctgg
gtgtccgtgttactgaagaagacgaagaaggccttcctggcccaccttgccagcgcggtg
gctgagctccgagcacgctggggtctgcaggacaacgatctgctggaccagatggtggcc
gagctgcagcaggacgtggcccagcgcctccaggacagcaccaagagagagctccagaag
ctccagggccgggcggggcggatggtgctggagcctcccaggcaggccctcactggggag
ctgctcctgcagacccagcagcgtagacaccgtctccggggcctgcgaaacctctcggcc
ttctctgagcggaccctgggcctggggcccccctccttcaccctggaggacgagccagcc
ctcagcacagccctggggagccagctgggtgaggaggcagagggcgaggagttctgtccc
tgcgaggcctgcgtgaggaagaaagtgagccctacgtcccccaaggccacaatgggggca
accagaggtcccatcaaagaggcctttgacctgcagcagattctgcagaggaagagggga
gaacacaccgatggggaggcggcagaggtggcccctggcaagacccatacagaccccacg
agcaccaggactgtccagggggctgagggagggctggggccggggctgagccaggggcct
ggagtggacgagggtgaggacggcgaggagagccagagactcgacagagacaaagatccc
aaactgggggaggcagagggagatgcaatggctcaggagagaaaagggaaaacccacgac
agcgaaaccagtgcgggcagcgagctgggggaagccgagcaggagggagagggcataagt
gaaaggggagaaactgggggccagggctctgggcatgaggacaacttgcagggtgaagct
gcggcaggaggtgaccaagatccaggacagagtgatggggctgaaggcatagaggccccg
aaggctgaaggggagtcccagccagagtcagaaggtgcagaggcccaggaggctgaagag
gagtcccagccagagtcagaaggtgtagaggccccagaggcagaaggggagtcccagcca
gagtcagaaggtgtagaggcccaggaggcagaaaaggaggcccaggaggctgaagaggag
gcccagccagagtcagaaggtgtagaggccccagaggcagaaggggaggcccaggaggca
gaaaaggaggcccagccagagacagaaagtgtagaggccctggagactgaaggggaggac
cagccagagtcagaaggcgcagaggcccaagaggcagaagaggaggcccaggaggcagaa
ggggaggcccagccagagtcagaagttgtagaggccccagaggttgaaggggagatgcag
gaggcagaaggggaggcccagccagagtcagaaggtgtagaggccccagaggttgaagag
gagacccagaagacagaagggggtgcccagccagagtcagatggtgtagaggcccaggag
gcagaagaggaggtccaggaggcagaaggggaggtccaggaggcagaaggggaggcccag
ccagagtcagaanggttagaggtccaggaggcagaaggggaggcccagccagagtcagaa
gttgtagaggccccagaggttgaagaggagacccagaagacagaagggggtgcccagcca
gagtcagacggtgtagaggcccaggaggcagaagaggaggtccaggaggcagaaggggag
gcccagccagagtcagaaggtgtagaggcccaggaggcagaagaggaggtccaggaggca
gaaggggaggcccagccagaatcagaaggtgtagaggccccagaggctgaagggcaggcc
cagccagagtcagaaagtgtagaggccccagaggcagaaggggaggcccaaccagagtca
gaaggtgtagaggccctggcagctgaagaggaggcccagccagagccagaaggcgtagag
gccccggaggctgaaggggaggcccagccagagtcagaaggagaaactcaaggtgagaaa
aaggggagccctcaggtcagtctaggggatagccagtctgaggaggcttctgaaagcagc
agcccagtccctgaggacaggcccactccacccccttccccaggtggagacactccccac
caaaggccaggctcccaaacaggcccttcctcctccagagcatcctctcggggcaactgc
tggtggaaagactcagaaaatgaccatgtacgtggagacacaaggagccctgacgccaag
tccatgggggcccctcatgcagagaggaaggccaccaggatgtacccagaaagttccact
tatgagcaagaagaggcccgtttgggcccaaggactccagagcagggggccagtgaaggc
tgtgacctacaagaggaccaggcacttggaagtctcacccccaccgaggcagtgggcagg
gcagacggctttggccaagatgacttagatttctag
DBGET
integrated database retrieval system
